RNA–Protein interactions for RNA: ENST00000540086.5

CDH19-203, Transcript of cadherin 19, humanhuman

TSL 2 BASIC

Gene CDH19, Length 1,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-203ENST00000540086 ZBTB1Q9Y2K1 713 aa8.66□□□□□ -1.02
CDH19-203ENST00000540086 ITGB4P16144 1822 aa8.66□□□□□ -1.02
CDH19-203ENST00000540086 ALDH1L1O75891 902 aa8.66□□□□□ -1.02
CDH19-203ENST00000540086 IGKV5-2P06315 115 aa8.66□□□□□ -1.02
CDH19-203ENST00000540086 NBPF7P0C2Y1 421 aaPredicted RBP8.66□□□□□ -1.02
CDH19-203ENST00000540086 UBTFL1P0CB47 393 aaPredicted RBP8.66□□□□□ -1.02
CDH19-203ENST00000540086 RBM6P78332 1123 aaKnown RBP8.66□□□□□ -1.02
CDH19-203ENST00000540086 ANKRD44Q8N8A2 993 aa8.66□□□□□ -1.02
CDH19-203ENST00000540086 LINS1Q8NG48 757 aa8.66□□□□□ -1.02
CDH19-203ENST00000540086 PLBD2Q8NHP8 589 aa8.66□□□□□ -1.02
CDH19-203ENST00000540086 METTL22Q9BUU2 404 aaPredicted RBP8.66□□□□□ -1.02
CDH19-203ENST00000540086 ZBTB3Q9H5J0 574 aa8.66□□□□□ -1.02
CDH19-203ENST00000540086 KCNQ4P56696 695 aa8.65□□□□□ -1.02
CDH19-203ENST00000540086 NEXNQ0ZGT2 675 aa8.65□□□□□ -1.02
CDH19-203ENST00000540086 KRT27Q7Z3Y8 459 aa8.65□□□□□ -1.02
CDH19-203ENST00000540086 ARXQ96QS3 562 aa8.65□□□□□ -1.02
CDH19-203ENST00000540086 LRRFIP2Q9Y608 721 aaKnown RBP8.65□□□□□ -1.02
CDH19-203ENST00000540086 LAMB4A4D0S4 1761 aa8.65□□□□□ -1.02
CDH19-203ENST00000540086 ATP5J2-PTCD1G3V325 749 aa8.64□□□□□ -1.03
CDH19-203ENST00000540086 RGS3P49796 1198 aa8.64□□□□□ -1.03
CDH19-203ENST00000540086 RPAP2Q8IXW5 612 aaPredicted RBP8.64□□□□□ -1.03
CDH19-203ENST00000540086 C9orf78Q9NZ63 289 aaPredicted RBP8.64□□□□□ -1.03
CDH19-203ENST00000540086 PDZRN3Q9UPQ7 1066 aa8.64□□□□□ -1.03
CDH19-203ENST00000540086 NEURL1BA8MQ27 555 aa8.64□□□□□ -1.03
CDH19-203ENST00000540086 CRKLP46109 303 aaKnown RBP8.64□□□□□ -1.03
CDH19-203ENST00000540086 INTS5Q6P9B9 1019 aaKnown RBP8.64□□□□□ -1.03
CDH19-203ENST00000540086 SMC5Q8IY18 1101 aa8.64□□□□□ -1.03
CDH19-203ENST00000540086 CCDC87Q9NVE4 849 aa8.64□□□□□ -1.03
CDH19-203ENST00000540086 RGS17Q9UGC6 210 aaPredicted RBP8.64□□□□□ -1.03
CDH19-203ENST00000540086 GRM8O00222 908 aa8.63□□□□□ -1.03
CDH19-203ENST00000540086 RXRBP28702 533 aa8.63□□□□□ -1.03
CDH19-203ENST00000540086 GCKRQ14397 625 aa8.63□□□□□ -1.03
CDH19-203ENST00000540086 KIF6Q6ZMV9 814 aa8.63□□□□□ -1.03
CDH19-203ENST00000540086 LINC00116Q8NCU8 138 aa8.63□□□□□ -1.03
CDH19-203ENST00000540086 KAT6BQ8WYB5 2073 aa8.63□□□□□ -1.03
CDH19-203ENST00000540086 PNMA6EA0A0J9YXQ4 647 aa8.62□□□□□ -1.03
CDH19-203ENST00000540086 HOXD11P31277 338 aaPredicted RBP8.62□□□□□ -1.03
CDH19-203ENST00000540086 IL6STP40189 918 aaPredicted RBP8.62□□□□□ -1.03
CDH19-203ENST00000540086 FAM196AQ6ZSG2 479 aa8.62□□□□□ -1.03
CDH19-203ENST00000540086 JARID2Q92833 1246 aaPredicted RBP8.62□□□□□ -1.03
CDH19-203ENST00000540086 BCL11BQ9C0K0 894 aaPredicted RBP8.62□□□□□ -1.03
CDH19-203ENST00000540086 ATP8B2P98198 1209 aa8.62□□□□□ -1.03
CDH19-203ENST00000540086 POTEAQ6S8J7 498 aa8.62□□□□□ -1.03
CDH19-203ENST00000540086 NPM2Q86SE8 214 aaKnown RBP8.62□□□□□ -1.03
CDH19-203ENST00000540086 GCC1Q96CN9 775 aa8.62□□□□□ -1.03
CDH19-203ENST00000540086 CCNL1Q9UK58 526 aaPredicted RBP8.62□□□□□ -1.03
CDH19-203ENST00000540086 TBC1D2BQ9UPU7 963 aa8.62□□□□□ -1.03
CDH19-203ENST00000540086 TJP1Q07157 1748 aa8.62□□□□□ -1.03
CDH19-203ENST00000540086 MAP3K15Q6ZN16 1313 aa8.62□□□□□ -1.03
CDH19-203ENST00000540086 CACNA1FO60840 1977 aa8.61□□□□□ -1.03
CDH19-203ENST00000540086 HMMRO75330 724 aa8.61□□□□□ -1.03
CDH19-203ENST00000540086 TRIM37O94972 964 aa8.61□□□□□ -1.03
CDH19-203ENST00000540086 EIF5P55010 431 aaKnown RBP8.61□□□□□ -1.03
CDH19-203ENST00000540086 PLCB2Q00722 1185 aa8.61□□□□□ -1.03
CDH19-203ENST00000540086 NUCB1Q02818 461 aa8.61□□□□□ -1.03
CDH19-203ENST00000540086 HLFQ16534 295 aa8.61□□□□□ -1.03
CDH19-203ENST00000540086 ANKRD45Q5TZF3 282 aa8.61□□□□□ -1.03
CDH19-203ENST00000540086 DZIP3Q86Y13 1208 aaKnown RBP8.61□□□□□ -1.03
CDH19-203ENST00000540086 SUCLG2Q96I99 432 aa8.61□□□□□ -1.03
CDH19-203ENST00000540086 DCTPP1Q9H773 170 aa8.61□□□□□ -1.03
CDH19-203ENST00000540086 UTYO14607 1347 aa8.61□□□□□ -1.03
CDH19-203ENST00000540086 A0A087WZG4 1122 aa8.61□□□□□ -1.03
CDH19-203ENST00000540086 APBB1O00213 710 aa8.61□□□□□ -1.03
CDH19-203ENST00000540086 UBE3BQ7Z3V4 1068 aa8.61□□□□□ -1.03
CDH19-203ENST00000540086 PPP1R42Q7Z4L9 355 aa8.61□□□□□ -1.03
CDH19-203ENST00000540086 KAZALD1Q96I82 304 aa8.61□□□□□ -1.03
CDH19-203ENST00000540086 LNPKQ9C0E8 428 aa8.61□□□□□ -1.03
CDH19-203ENST00000540086 BCL11AQ9H165 835 aa8.61□□□□□ -1.03
CDH19-203ENST00000540086 CWC25Q9NXE8 425 aaPredicted RBP8.61□□□□□ -1.03
CDH19-203ENST00000540086 NHSQ6T4R5 1651 aa8.6□□□□□ -1.03
CDH19-203ENST00000540086 SRGAP3O43295 1099 aa8.6□□□□□ -1.03
CDH19-203ENST00000540086 PDE4AP27815 886 aa8.6□□□□□ -1.03
CDH19-203ENST00000540086 TCIRG1Q13488 830 aa8.6□□□□□ -1.03
CDH19-203ENST00000540086 RTL5Q5HYW3 569 aaPredicted RBP8.6□□□□□ -1.03
CDH19-203ENST00000540086 GIGYF2Q6Y7W6 1299 aaKnown RBP8.6□□□□□ -1.03
CDH19-203ENST00000540086 SMIM5Q71RC9 77 aa8.6□□□□□ -1.03
CDH19-203ENST00000540086 CHD1LQ86WJ1 897 aa8.6□□□□□ -1.03
CDH19-203ENST00000540086 BICC1Q9H694 974 aaKnown RBP8.6□□□□□ -1.03
CDH19-203ENST00000540086 EXOC6BQ9Y2D4 811 aa8.6□□□□□ -1.03
CDH19-203ENST00000540086 GPTP24298 496 aa8.59□□□□□ -1.03
CDH19-203ENST00000540086 EPHA10Q5JZY3 1008 aa8.59□□□□□ -1.03
CDH19-203ENST00000540086 CCDC191Q8NCU4 936 aa8.59□□□□□ -1.03
CDH19-203ENST00000540086 SSH3Q8TE77 659 aa8.59□□□□□ -1.03
CDH19-203ENST00000540086 ISCA1Q9BUE6 129 aa8.59□□□□□ -1.03
CDH19-203ENST00000540086 TSHZ2Q9NRE2 1034 aa8.59□□□□□ -1.03
CDH19-203ENST00000540086 HDAC5Q9UQL6 1122 aa8.59□□□□□ -1.03
CDH19-203ENST00000540086 IBTKQ9P2D0 1353 aaPredicted RBP8.59□□□□□ -1.03
CDH19-203ENST00000540086 N4BP2Q86UW6 1770 aaPredicted RBP8.59□□□□□ -1.03
CDH19-203ENST00000540086 CASP7P55210 303 aa8.59□□□□□ -1.03
CDH19-203ENST00000540086 POLA2Q14181 598 aa8.59□□□□□ -1.03
CDH19-203ENST00000540086 LRRC4BQ9NT99 713 aa8.59□□□□□ -1.03
CDH19-203ENST00000540086 CNTNAP4Q9C0A0 1308 aa8.59□□□□□ -1.04
CDH19-203ENST00000540086 COL15A1P39059 1388 aa8.58□□□□□ -1.04
CDH19-203ENST00000540086 ERVV-1B6SEH8 477 aa8.58□□□□□ -1.04
CDH19-203ENST00000540086 H7C1W4 665 aa8.58□□□□□ -1.04
CDH19-203ENST00000540086 GNPATO15228 680 aa8.58□□□□□ -1.04
CDH19-203ENST00000540086 SMARCA5O60264 1052 aaPredicted RBP8.58□□□□□ -1.04
CDH19-203ENST00000540086 CAMTA2O94983 1202 aa8.58□□□□□ -1.04
CDH19-203ENST00000540086 MTX1Q13505 466 aa8.58□□□□□ -1.04
CDH19-203ENST00000540086 BTAF1O14981 1849 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms