RNA–Protein interactions for RNA: ENST00000538909.1

CBX3P4-201, Transcript of chromobox 3 pseudogene 4, humanhuman

BASIC

Gene CBX3P4, Length 354 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-201ENST00000538909 PCMTD1Q96MG8 357 aaPredicted RBP5.16□□□□□ -1.58
CBX3P4-201ENST00000538909 SLC30A3Q99726 388 aa5.16□□□□□ -1.58
CBX3P4-201ENST00000538909 PRDM6Q9NQX0 595 aa5.16□□□□□ -1.58
CBX3P4-201ENST00000538909 TXKP42681 527 aa5.15□□□□□ -1.59
CBX3P4-201ENST00000538909 NRG1Q02297 640 aaPredicted RBP5.15□□□□□ -1.59
CBX3P4-201ENST00000538909 LRRC69Q6ZNQ3 347 aa5.15□□□□□ -1.59
CBX3P4-201ENST00000538909 ZDHHC3Q9NYG2 299 aa5.15□□□□□ -1.59
CBX3P4-201ENST00000538909 USP21Q9UK80 565 aa5.15□□□□□ -1.59
CBX3P4-201ENST00000538909 A0A0A0MRY4 1105 aa5.14□□□□□ -1.59
CBX3P4-201ENST00000538909 TXLNAP40222 546 aa5.14□□□□□ -1.59
CBX3P4-201ENST00000538909 TBC1D8BQ0IIM8 1120 aa5.14□□□□□ -1.59
CBX3P4-201ENST00000538909 SFSWAPQ12872 951 aaKnown RBP5.14□□□□□ -1.59
CBX3P4-201ENST00000538909 SLFNL1Q499Z3 407 aa5.14□□□□□ -1.59
CBX3P4-201ENST00000538909 ZNF295-AS1Q8N0V1 137 aa5.14□□□□□ -1.59
CBX3P4-201ENST00000538909 TNFRSF25Q93038 417 aa5.14□□□□□ -1.59
CBX3P4-201ENST00000538909 KRTAP4-2Q9BYR5 136 aa5.14□□□□□ -1.59
CBX3P4-201ENST00000538909 NDUFB9Q9Y6M9 179 aa5.14□□□□□ -1.59
CBX3P4-201ENST00000538909 LILRB5O75023 590 aa5.13□□□□□ -1.59
CBX3P4-201ENST00000538909 YBX3P16989 372 aaKnown RBP eCLIP5.13□□□□□ -1.59
CBX3P4-201ENST00000538909 RAC1P63000 192 aa5.13□□□□□ -1.59
CBX3P4-201ENST00000538909 C20orf204Q6ZNR8 217 aa5.13□□□□□ -1.59
CBX3P4-201ENST00000538909 LENG1Q96BZ8 264 aaPredicted RBP5.13□□□□□ -1.59
CBX3P4-201ENST00000538909 PCMTD2Q9NV79 361 aa5.13□□□□□ -1.59
CBX3P4-201ENST00000538909 RNF112Q9ULX5 631 aa5.13□□□□□ -1.59
CBX3P4-201ENST00000538909 IQSEC3Q9UPP2 1182 aaPredicted RBP5.13□□□□□ -1.59
CBX3P4-201ENST00000538909 COL17A1Q9UMD9 1497 aaPredicted RBP5.13□□□□□ -1.59
CBX3P4-201ENST00000538909 A6NJY4 79 aa5.12□□□□□ -1.59
CBX3P4-201ENST00000538909 CDK2AP1O14519 115 aa5.12□□□□□ -1.59
CBX3P4-201ENST00000538909 SPEM2Q0P670 501 aa5.12□□□□□ -1.59
CBX3P4-201ENST00000538909 PHTF2Q8N3S3 785 aa5.12□□□□□ -1.59
CBX3P4-201ENST00000538909 SIRT1Q96EB6 747 aa5.12□□□□□ -1.59
CBX3P4-201ENST00000538909 NEUROD4Q9HD90 331 aa5.12□□□□□ -1.59
CBX3P4-201ENST00000538909 SSTR4P31391 388 aa5.11□□□□□ -1.59
CBX3P4-201ENST00000538909 MTMR14Q8NCE2 650 aa5.11□□□□□ -1.59
CBX3P4-201ENST00000538909 SSBP4Q9BWG4 385 aaPredicted RBP5.11□□□□□ -1.59
CBX3P4-201ENST00000538909 IGFLR1Q9H665 355 aa5.11□□□□□ -1.59
CBX3P4-201ENST00000538909 ARID1BQ8NFD5 2236 aaPredicted RBP5.11□□□□□ -1.59
CBX3P4-201ENST00000538909 TMEM229AB2RXF0 380 aa5.1□□□□□ -1.59
CBX3P4-201ENST00000538909 NEUROD1Q13562 356 aa5.1□□□□□ -1.59
CBX3P4-201ENST00000538909 MTFR1Q15390 333 aa5.1□□□□□ -1.59
CBX3P4-201ENST00000538909 NUDT8Q8WV74 236 aa5.1□□□□□ -1.59
CBX3P4-201ENST00000538909 JPH1Q9HDC5 661 aaPredicted RBP5.1□□□□□ -1.59
CBX3P4-201ENST00000538909 IREB2P48200 963 aaKnown RBP5.09□□□□□ -1.59
CBX3P4-201ENST00000538909 IRAK1P51617 712 aa5.09□□□□□ -1.59
CBX3P4-201ENST00000538909 DMRTC2Q8IXT2 367 aaPredicted RBP5.09□□□□□ -1.59
CBX3P4-201ENST00000538909 ZDHHC1Q8WTX9 485 aa5.09□□□□□ -1.59
CBX3P4-201ENST00000538909 FMNL2Q96PY5 1086 aa5.09□□□□□ -1.59
CBX3P4-201ENST00000538909 SLC4A9Q96Q91 983 aa5.09□□□□□ -1.59
CBX3P4-201ENST00000538909 EIF4G2P78344 907 aaKnown RBP eCLIP5.08□□□□□ -1.6
CBX3P4-201ENST00000538909 FMR1NBQ8N0W7 255 aaPredicted RBP5.08□□□□□ -1.6
CBX3P4-201ENST00000538909 WFDC12Q8WWY7 111 aa5.08□□□□□ -1.6
CBX3P4-201ENST00000538909 BHMTQ93088 406 aa5.08□□□□□ -1.6
CBX3P4-201ENST00000538909 L3MBTL2Q969R5 705 aa5.08□□□□□ -1.6
CBX3P4-201ENST00000538909 UBE2OQ9C0C9 1292 aaKnown RBP5.08□□□□□ -1.6
CBX3P4-201ENST00000538909 SNRKQ9NRH2 765 aa5.08□□□□□ -1.6
CBX3P4-201ENST00000538909 ZNF232Q9UNY5 417 aa5.08□□□□□ -1.6
CBX3P4-201ENST00000538909 TBCELQ5QJ74 424 aa5.07□□□□□ -1.6
CBX3P4-201ENST00000538909 CEP63Q96MT8 703 aa5.07□□□□□ -1.6
CBX3P4-201ENST00000538909 SLC6A14Q9UN76 642 aa5.07□□□□□ -1.6
CBX3P4-201ENST00000538909 SOCS7O14512 581 aa5.06□□□□□ -1.6
CBX3P4-201ENST00000538909 TAL1P17542 331 aaPredicted RBP5.06□□□□□ -1.6
CBX3P4-201ENST00000538909 NOS3P29474 1203 aa5.06□□□□□ -1.6
CBX3P4-201ENST00000538909 FZD5Q13467 585 aa5.06□□□□□ -1.6
CBX3P4-201ENST00000538909 RHPN1Q8TCX5 695 aa5.06□□□□□ -1.6
CBX3P4-201ENST00000538909 HSH2DQ96JZ2 352 aa5.06□□□□□ -1.6
CBX3P4-201ENST00000538909 GOPCQ9HD26 462 aa5.06□□□□□ -1.6
CBX3P4-201ENST00000538909 BRD7Q9NPI1 651 aa5.06□□□□□ -1.6
CBX3P4-201ENST00000538909 RNF114Q9Y508 228 aa5.06□□□□□ -1.6
CBX3P4-201ENST00000538909 EML1O00423 815 aa5.05□□□□□ -1.6
CBX3P4-201ENST00000538909 NOS2P35228 1153 aa5.05□□□□□ -1.6
CBX3P4-201ENST00000538909 AFF1P51825 1210 aaKnown RBP5.05□□□□□ -1.6
CBX3P4-201ENST00000538909 SH3PXD2AQ5TCZ1 1133 aa5.05□□□□□ -1.6
CBX3P4-201ENST00000538909 PSAPL1Q6NUJ1 521 aa5.05□□□□□ -1.6
CBX3P4-201ENST00000538909 PRR23CQ6ZRP0 262 aa5.05□□□□□ -1.6
CBX3P4-201ENST00000538909 PLPP7Q8NBV4 271 aa5.05□□□□□ -1.6
CBX3P4-201ENST00000538909 MEGF10Q96KG7 1140 aa5.05□□□□□ -1.6
CBX3P4-201ENST00000538909 CHIC2Q9UKJ5 165 aa5.05□□□□□ -1.6
CBX3P4-201ENST00000538909 TBC1D2BQ9UPU7 963 aa5.05□□□□□ -1.6
CBX3P4-201ENST00000538909 KCNH4Q9UQ05 1017 aa5.05□□□□□ -1.6
CBX3P4-201ENST00000538909 SFI1A8K8P3 1242 aa5.04□□□□□ -1.6
CBX3P4-201ENST00000538909 APBB1O00213 710 aa5.04□□□□□ -1.6
CBX3P4-201ENST00000538909 FSTP19883 344 aa5.04□□□□□ -1.6
CBX3P4-201ENST00000538909 TEAD4Q15561 434 aa5.04□□□□□ -1.6
CBX3P4-201ENST00000538909 BANK1Q8NDB2 785 aa5.04□□□□□ -1.6
CBX3P4-201ENST00000538909 SCHIP1Q9P0W5 487 aaPredicted RBP5.04□□□□□ -1.6
CBX3P4-201ENST00000538909 OAS3Q9Y6K5 1087 aaKnown RBP5.04□□□□□ -1.6
CBX3P4-201ENST00000538909 BACH1O14867 736 aa5.03□□□□□ -1.6
CBX3P4-201ENST00000538909 RGS9O75916 674 aaPredicted RBP5.03□□□□□ -1.6
CBX3P4-201ENST00000538909 PSME1Q06323 249 aa5.03□□□□□ -1.6
CBX3P4-201ENST00000538909 MAP7D1Q3KQU3 841 aa5.03□□□□□ -1.6
CBX3P4-201ENST00000538909 SLC9A9Q8IVB4 645 aa5.03□□□□□ -1.6
CBX3P4-201ENST00000538909 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.03□□□□□ -1.6
CBX3P4-201ENST00000538909 C7orf43Q8WVR3 580 aa5.03□□□□□ -1.6
CBX3P4-201ENST00000538909 KRTAP17-1Q9BYP8 105 aa5.03□□□□□ -1.6
CBX3P4-201ENST00000538909 DNAJB12Q9NXW2 375 aaKnown RBP5.03□□□□□ -1.6
CBX3P4-201ENST00000538909 NAGPAQ9UK23 515 aa5.03□□□□□ -1.6
CBX3P4-201ENST00000538909 CD97P48960 835 aa5.02□□□□□ -1.61
CBX3P4-201ENST00000538909 TYRO3Q06418 890 aa5.02□□□□□ -1.61
CBX3P4-201ENST00000538909 VAC14Q08AM6 782 aa5.02□□□□□ -1.61
CBX3P4-201ENST00000538909 IL27Q8NEV9 243 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms