RNA–Protein interactions for RNA: ENST00000537728.5

ATP6V0A1-204, Transcript of ATPase H+ transporting V0 subunit a1, humanhuman

TSL 2 BASIC

Gene ATP6V0A1, Length 2,774 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1-204ENST00000537728 MCTP1Q6DN14 999 aa19.03■□□□□ 0.64
ATP6V0A1-204ENST00000537728 LARP1Q6PKG0 1096 aaKnown RBP19.03■□□□□ 0.64
ATP6V0A1-204ENST00000537728 TTC5Q8N0Z6 440 aa19.03■□□□□ 0.64
ATP6V0A1-204ENST00000537728 ABCC6O95255 1503 aa19.03■□□□□ 0.64
ATP6V0A1-204ENST00000537728 GPATCH3Q96I76 525 aa19.03■□□□□ 0.64
ATP6V0A1-204ENST00000537728 IFIT2P09913 472 aaKnown RBP19.02■□□□□ 0.64
ATP6V0A1-204ENST00000537728 MRE11P49959 708 aa19.02■□□□□ 0.64
ATP6V0A1-204ENST00000537728 BICC1Q9H694 974 aaKnown RBP19.02■□□□□ 0.64
ATP6V0A1-204ENST00000537728 UTYO14607 1347 aa19.02■□□□□ 0.64
ATP6V0A1-204ENST00000537728 SGSM2O43147 1006 aa19.02■□□□□ 0.63
ATP6V0A1-204ENST00000537728 NOL8Q76FK4 1167 aaKnown RBP19.02■□□□□ 0.63
ATP6V0A1-204ENST00000537728 ZNF496Q96IT1 587 aaPredicted RBP19.02■□□□□ 0.63
ATP6V0A1-204ENST00000537728 DCAF5Q96JK2 942 aa19.02■□□□□ 0.63
ATP6V0A1-204ENST00000537728 HSPA4P34932 840 aa19.01■□□□□ 0.63
ATP6V0A1-204ENST00000537728 XAGE3Q8WTP9 111 aa19.01■□□□□ 0.63
ATP6V0A1-204ENST00000537728 DDX49Q9Y6V7 483 aaKnown RBP19.01■□□□□ 0.63
ATP6V0A1-204ENST00000537728 SPATA31A3Q5VYP0 1347 aa19.01■□□□□ 0.63
ATP6V0A1-204ENST00000537728 PKD1L3Q7Z443 1732 aa19.01■□□□□ 0.63
ATP6V0A1-204ENST00000537728 UPF3BQ9BZI7 483 aaKnown RBP19.01■□□□□ 0.63
ATP6V0A1-204ENST00000537728 ECHDC1Q9NTX5 307 aa19.01■□□□□ 0.63
ATP6V0A1-204ENST00000537728 ISY1Q9ULR0 285 aaKnown RBP19.01■□□□□ 0.63
ATP6V0A1-204ENST00000537728 IGKV5-2P06315 115 aa19■□□□□ 0.63
ATP6V0A1-204ENST00000537728 CWC27Q6UX04 472 aaKnown RBP19■□□□□ 0.63
ATP6V0A1-204ENST00000537728 KIAA1211Q6ZU35 1233 aa19■□□□□ 0.63
ATP6V0A1-204ENST00000537728 COPS6Q7L5N1 327 aa19■□□□□ 0.63
ATP6V0A1-204ENST00000537728 CYP27B1O15528 508 aa19■□□□□ 0.63
ATP6V0A1-204ENST00000537728 G3BP1Q13283 466 aaKnown RBP eCLIP19■□□□□ 0.63
ATP6V0A1-204ENST00000537728 IL17RAQ96F46 866 aa19■□□□□ 0.63
ATP6V0A1-204ENST00000537728 KAZALD1Q96I82 304 aa19■□□□□ 0.63
ATP6V0A1-204ENST00000537728 RAD50Q92878 1312 aa19■□□□□ 0.63
ATP6V0A1-204ENST00000537728 SNRPA1P09661 255 aaKnown RBP18.99■□□□□ 0.63
ATP6V0A1-204ENST00000537728 AACSQ86V21 672 aa18.99■□□□□ 0.63
ATP6V0A1-204ENST00000537728 GRPEL1Q9HAV7 217 aa18.99■□□□□ 0.63
ATP6V0A1-204ENST00000537728 AFDNP55196 1824 aaKnown RBP18.99■□□□□ 0.63
ATP6V0A1-204ENST00000537728 MYD88Q99836 296 aa18.99■□□□□ 0.63
ATP6V0A1-204ENST00000537728 DIAPH3Q9NSV4 1193 aa18.99■□□□□ 0.63
ATP6V0A1-204ENST00000537728 NEURL1BA8MQ27 555 aa18.98■□□□□ 0.63
ATP6V0A1-204ENST00000537728 FMNL2Q96PY5 1086 aa18.98■□□□□ 0.63
ATP6V0A1-204ENST00000537728 PANK2Q9BZ23 570 aa18.98■□□□□ 0.63
ATP6V0A1-204ENST00000537728 USP16Q9Y5T5 823 aa18.98■□□□□ 0.63
ATP6V0A1-204ENST00000537728 MRC1P22897 1456 aa18.98■□□□□ 0.63
ATP6V0A1-204ENST00000537728 CABP4P57796 275 aa18.98■□□□□ 0.63
ATP6V0A1-204ENST00000537728 CUL4AQ13619 759 aa18.98■□□□□ 0.63
ATP6V0A1-204ENST00000537728 KLHL40Q2TBA0 621 aa18.98■□□□□ 0.63
ATP6V0A1-204ENST00000537728 PLEKHG2Q9H7P9 1386 aa18.98■□□□□ 0.63
ATP6V0A1-204ENST00000537728 HSPA2P54652 639 aa18.98■□□□□ 0.63
ATP6V0A1-204ENST00000537728 RUFY2Q8WXA3 655 aa18.98■□□□□ 0.63
ATP6V0A1-204ENST00000537728 METTL22Q9BUU2 404 aaPredicted RBP18.98■□□□□ 0.63
ATP6V0A1-204ENST00000537728 LSG1Q9H089 658 aaKnown RBP18.97■□□□□ 0.63
ATP6V0A1-204ENST00000537728 ZDHHC9Q9Y397 364 aa18.97■□□□□ 0.63
ATP6V0A1-204ENST00000537728 XIRP1Q702N8 1843 aaKnown RBP18.97■□□□□ 0.63
ATP6V0A1-204ENST00000537728 PIP4K2AP48426 406 aaPredicted RBP18.97■□□□□ 0.63
ATP6V0A1-204ENST00000537728 GCKRQ14397 625 aa18.97■□□□□ 0.63
ATP6V0A1-204ENST00000537728 ANKRD13DQ6ZTN6 518 aa18.97■□□□□ 0.63
ATP6V0A1-204ENST00000537728 CPDO75976 1380 aa18.96■□□□□ 0.63
ATP6V0A1-204ENST00000537728 SASH1O94885 1247 aa18.96■□□□□ 0.63
ATP6V0A1-204ENST00000537728 SIL1Q9H173 461 aa18.96■□□□□ 0.63
ATP6V0A1-204ENST00000537728 INTS4Q96HW7 963 aaKnown RBP18.96■□□□□ 0.63
ATP6V0A1-204ENST00000537728 SNX14Q9Y5W7 946 aa18.95■□□□□ 0.62
ATP6V0A1-204ENST00000537728 NCLP19338 710 aaKnown RBP18.95■□□□□ 0.62
ATP6V0A1-204ENST00000537728 FOXD4L5Q5VV16 416 aaPredicted RBP18.95■□□□□ 0.62
ATP6V0A1-204ENST00000537728 FOXD4L4Q8WXT5 416 aaPredicted RBP18.95■□□□□ 0.62
ATP6V0A1-204ENST00000537728 LMBRD1Q9NUN5 540 aa18.95■□□□□ 0.62
ATP6V0A1-204ENST00000537728 ARFGEF2Q9Y6D5 1785 aa18.94■□□□□ 0.62
ATP6V0A1-204ENST00000537728 EVI5LQ96CN4 794 aa18.94■□□□□ 0.62
ATP6V0A1-204ENST00000537728 CCDC8Q9H0W5 538 aaPredicted RBP18.94■□□□□ 0.62
ATP6V0A1-204ENST00000537728 GAS2L3Q86XJ1 694 aa18.94■□□□□ 0.62
ATP6V0A1-204ENST00000537728 EAF2Q96CJ1 260 aaPredicted RBP18.94■□□□□ 0.62
ATP6V0A1-204ENST00000537728 LAMB4A4D0S4 1761 aa18.94■□□□□ 0.62
ATP6V0A1-204ENST00000537728 PARP4Q9UKK3 1724 aaKnown RBP18.94■□□□□ 0.62
ATP6V0A1-204ENST00000537728 FAM43AQ8N2R8 423 aa18.93■□□□□ 0.62
ATP6V0A1-204ENST00000537728 BRINP3Q76B58 766 aa18.93■□□□□ 0.62
ATP6V0A1-204ENST00000537728 KLHDC4Q8TBB5 520 aa18.93■□□□□ 0.62
ATP6V0A1-204ENST00000537728 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.93■□□□□ 0.62
ATP6V0A1-204ENST00000537728 PRPF40AO75400 957 aaKnown RBP18.93■□□□□ 0.62
ATP6V0A1-204ENST00000537728 LRP10Q7Z4F1 713 aa18.93■□□□□ 0.62
ATP6V0A1-204ENST00000537728 PRDM11Q9NQV5 511 aa18.92■□□□□ 0.62
ATP6V0A1-204ENST00000537728 EPHA10Q5JZY3 1008 aa18.92■□□□□ 0.62
ATP6V0A1-204ENST00000537728 TOM1L2Q6ZVM7 507 aa18.92■□□□□ 0.62
ATP6V0A1-204ENST00000537728 RASEFQ8IZ41 740 aa18.92■□□□□ 0.62
ATP6V0A1-204ENST00000537728 JARID2Q92833 1246 aaPredicted RBP18.91■□□□□ 0.62
ATP6V0A1-204ENST00000537728 BRD1O95696 1058 aa18.9■□□□□ 0.62
ATP6V0A1-204ENST00000537728 CAVIN1Q6NZI2 390 aaKnown RBP18.9■□□□□ 0.62
ATP6V0A1-204ENST00000537728 TLR7Q9NYK1 1049 aaKnown RBP18.9■□□□□ 0.62
ATP6V0A1-204ENST00000537728 WDR17Q8IZU2 1322 aa18.9■□□□□ 0.62
ATP6V0A1-204ENST00000537728 KDM4FA0A1W2PPD8 638 aa18.89■□□□□ 0.62
ATP6V0A1-204ENST00000537728 HIP1O00291 1037 aa18.89■□□□□ 0.62
ATP6V0A1-204ENST00000537728 PTH1RQ03431 593 aa18.89■□□□□ 0.62
ATP6V0A1-204ENST00000537728 ZCRB1Q8TBF4 217 aaKnown RBP18.89■□□□□ 0.62
ATP6V0A1-204ENST00000537728 PCDH11XQ9BZA7 1347 aa18.89■□□□□ 0.61
ATP6V0A1-204ENST00000537728 PCDH11YQ9BZA8 1340 aa18.89■□□□□ 0.61
ATP6V0A1-204ENST00000537728 ATP5J2-PTCD1G3V325 749 aa18.89■□□□□ 0.61
ATP6V0A1-204ENST00000537728 PTCD1O75127 700 aaKnown RBP18.89■□□□□ 0.61
ATP6V0A1-204ENST00000537728 UBE3BQ7Z3V4 1068 aa18.89■□□□□ 0.61
ATP6V0A1-204ENST00000537728 BOLA2Q9H3K6 86 aa18.89■□□□□ 0.61
ATP6V0A1-204ENST00000537728 CASTP20810 708 aaKnown RBP18.88■□□□□ 0.61
ATP6V0A1-204ENST00000537728 CHAMP1Q96JM3 812 aa18.88■□□□□ 0.61
ATP6V0A1-204ENST00000537728 TTC14Q96N46 770 aa18.88■□□□□ 0.61
ATP6V0A1-204ENST00000537728 AK2P54819 239 aa18.88■□□□□ 0.61
ATP6V0A1-204ENST00000537728 A0A087WZG4 1122 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms