RNA–Protein interactions for RNA: ENST00000537392.1

PMFBP1-206, Transcript of polyamine modulated factor 1 binding protein 1, humanhuman

TSL 2

Gene PMFBP1, Length 2,038 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMFBP1-206ENST00000537392 PALLDQ8WX93 1383 aa11.79□□□□□ -0.52
PMFBP1-206ENST00000537392 PNMA6EA0A0J9YXQ4 647 aa11.79□□□□□ -0.52
PMFBP1-206ENST00000537392 ANKRD45Q5TZF3 282 aa11.79□□□□□ -0.52
PMFBP1-206ENST00000537392 SEPT12Q8IYM1 358 aa11.79□□□□□ -0.52
PMFBP1-206ENST00000537392 LNPKQ9C0E8 428 aa11.79□□□□□ -0.52
PMFBP1-206ENST00000537392 ARFGEF2Q9Y6D5 1785 aa11.79□□□□□ -0.52
PMFBP1-206ENST00000537392 LOC102724428A0A0B4J2F2 783 aa11.78□□□□□ -0.52
PMFBP1-206ENST00000537392 GRM8O00222 908 aa11.78□□□□□ -0.52
PMFBP1-206ENST00000537392 SIK1P57059 783 aa11.78□□□□□ -0.52
PMFBP1-206ENST00000537392 GCKRQ14397 625 aa11.78□□□□□ -0.52
PMFBP1-206ENST00000537392 FAM182BQ5T319 152 aa11.78□□□□□ -0.52
PMFBP1-206ENST00000537392 SMARCC1Q92922 1105 aaPredicted RBP11.78□□□□□ -0.52
PMFBP1-206ENST00000537392 NUP188Q5SRE5 1749 aa11.77□□□□□ -0.52
PMFBP1-206ENST00000537392 PTF1AQ7RTS3 328 aa11.77□□□□□ -0.52
PMFBP1-206ENST00000537392 ZBTB1Q9Y2K1 713 aa11.77□□□□□ -0.52
PMFBP1-206ENST00000537392 KAT6BQ8WYB5 2073 aa11.77□□□□□ -0.52
PMFBP1-206ENST00000537392 ATP5J2-PTCD1G3V325 749 aa11.77□□□□□ -0.53
PMFBP1-206ENST00000537392 ATP6V1AP38606 617 aa11.77□□□□□ -0.53
PMFBP1-206ENST00000537392 SSH3Q8TE77 659 aa11.77□□□□□ -0.53
PMFBP1-206ENST00000537392 ZBTB3Q9H5J0 574 aa11.77□□□□□ -0.53
PMFBP1-206ENST00000537392 RBM19Q9Y4C8 960 aaKnown RBP11.77□□□□□ -0.53
PMFBP1-206ENST00000537392 CICQ96RK0 1608 aaPredicted RBP11.77□□□□□ -0.53
PMFBP1-206ENST00000537392 ITPK1Q13572 414 aa11.76□□□□□ -0.53
PMFBP1-206ENST00000537392 POLA2Q14181 598 aa11.76□□□□□ -0.53
PMFBP1-206ENST00000537392 PPP1R42Q7Z4L9 355 aa11.76□□□□□ -0.53
PMFBP1-206ENST00000537392 SUCLG2Q96I99 432 aa11.76□□□□□ -0.53
PMFBP1-206ENST00000537392 BACH2Q9BYV9 841 aa11.76□□□□□ -0.53
PMFBP1-206ENST00000537392 ZNF330Q9Y3S2 320 aaPredicted RBP11.76□□□□□ -0.53
PMFBP1-206ENST00000537392 MTX1Q13505 466 aa11.76□□□□□ -0.53
PMFBP1-206ENST00000537392 KAZALD1Q96I82 304 aa11.76□□□□□ -0.53
PMFBP1-206ENST00000537392 HDAC5Q9UQL6 1122 aa11.76□□□□□ -0.53
PMFBP1-206ENST00000537392 NHSQ6T4R5 1651 aa11.75□□□□□ -0.53
PMFBP1-206ENST00000537392 IL6STP40189 918 aaPredicted RBP11.75□□□□□ -0.53
PMFBP1-206ENST00000537392 INTS5Q6P9B9 1019 aaKnown RBP11.75□□□□□ -0.53
PMFBP1-206ENST00000537392 KIF6Q6ZMV9 814 aa11.75□□□□□ -0.53
PMFBP1-206ENST00000537392 SRGAP3O43295 1099 aa11.74□□□□□ -0.53
PMFBP1-206ENST00000537392 CRKLP46109 303 aaKnown RBP11.74□□□□□ -0.53
PMFBP1-206ENST00000537392 FAM161AQ3B820 660 aa11.74□□□□□ -0.53
PMFBP1-206ENST00000537392 C8orf34Q49A92 452 aa11.74□□□□□ -0.53
PMFBP1-206ENST00000537392 CCDC87Q9NVE4 849 aa11.74□□□□□ -0.53
PMFBP1-206ENST00000537392 EXOC6BQ9Y2D4 811 aa11.74□□□□□ -0.53
PMFBP1-206ENST00000537392 APBB1O00213 710 aa11.74□□□□□ -0.53
PMFBP1-206ENST00000537392 CASP7P55210 303 aa11.74□□□□□ -0.53
PMFBP1-206ENST00000537392 ISCA1Q9BUE6 129 aa11.74□□□□□ -0.53
PMFBP1-206ENST00000537392 BICC1Q9H694 974 aaKnown RBP11.74□□□□□ -0.53
PMFBP1-206ENST00000537392 MAP3K15Q6ZN16 1313 aa11.74□□□□□ -0.53
PMFBP1-206ENST00000537392 ZNF831Q5JPB2 1677 aa11.73□□□□□ -0.53
PMFBP1-206ENST00000537392 RREB1Q92766 1687 aa11.73□□□□□ -0.53
PMFBP1-206ENST00000537392 A0A087WZG4 1122 aa11.73□□□□□ -0.53
PMFBP1-206ENST00000537392 SMARCA5O60264 1052 aaPredicted RBP11.73□□□□□ -0.53
PMFBP1-206ENST00000537392 EIF5P55010 431 aaKnown RBP11.73□□□□□ -0.53
PMFBP1-206ENST00000537392 TCIRG1Q13488 830 aa11.73□□□□□ -0.53
PMFBP1-206ENST00000537392 ZNF772Q68DY9 489 aaPredicted RBP11.73□□□□□ -0.53
PMFBP1-206ENST00000537392 CCDC191Q8NCU4 936 aa11.73□□□□□ -0.53
PMFBP1-206ENST00000537392 JARID2Q92833 1246 aaPredicted RBP11.73□□□□□ -0.53
PMFBP1-206ENST00000537392 CWC25Q9NXE8 425 aaPredicted RBP11.73□□□□□ -0.53
PMFBP1-206ENST00000537392 AFDNP55196 1824 aaKnown RBP11.73□□□□□ -0.53
PMFBP1-206ENST00000537392 H7C1W4 665 aa11.72□□□□□ -0.53
PMFBP1-206ENST00000537392 UBE3BQ7Z3V4 1068 aa11.72□□□□□ -0.53
PMFBP1-206ENST00000537392 ARXQ96QS3 562 aa11.72□□□□□ -0.53
PMFBP1-206ENST00000537392 ZBTB47Q9UFB7 747 aaPredicted RBP11.72□□□□□ -0.53
PMFBP1-206ENST00000537392 COL15A1P39059 1388 aa11.72□□□□□ -0.53
PMFBP1-206ENST00000537392 BTAF1O14981 1849 aa11.72□□□□□ -0.53
PMFBP1-206ENST00000537392 HLFQ16534 295 aa11.72□□□□□ -0.53
PMFBP1-206ENST00000537392 EPHA10Q5JZY3 1008 aa11.72□□□□□ -0.53
PMFBP1-206ENST00000537392 GIGYF2Q6Y7W6 1299 aaKnown RBP11.72□□□□□ -0.53
PMFBP1-206ENST00000537392 C16orf71Q8IYS4 520 aaPredicted RBP11.72□□□□□ -0.53
PMFBP1-206ENST00000537392 LINC00116Q8NCU8 138 aa11.72□□□□□ -0.53
PMFBP1-206ENST00000537392 SURF6O75683 361 aaKnown RBP11.71□□□□□ -0.53
PMFBP1-206ENST00000537392 TRIM28Q13263 835 aaKnown RBP11.71□□□□□ -0.53
PMFBP1-206ENST00000537392 DZIP3Q86Y13 1208 aaKnown RBP11.71□□□□□ -0.53
PMFBP1-206ENST00000537392 LRRCC1Q9C099 1032 aa11.71□□□□□ -0.53
PMFBP1-206ENST00000537392 COL5A3P25940 1745 aaPredicted RBP11.71□□□□□ -0.54
PMFBP1-206ENST00000537392 ERVV-1B6SEH8 477 aa11.7□□□□□ -0.54
PMFBP1-206ENST00000537392 KCNQ4P56696 695 aa11.7□□□□□ -0.54
PMFBP1-206ENST00000537392 RBM6P78332 1123 aaKnown RBP11.7□□□□□ -0.54
PMFBP1-206ENST00000537392 KRT27Q7Z3Y8 459 aa11.7□□□□□ -0.54
PMFBP1-206ENST00000537392 NPM2Q86SE8 214 aaKnown RBP11.7□□□□□ -0.54
PMFBP1-206ENST00000537392 PLEKHM2Q8IWE5 1019 aa11.7□□□□□ -0.54
PMFBP1-206ENST00000537392 OTUD7AQ8TE49 926 aaPredicted RBP11.7□□□□□ -0.54
PMFBP1-206ENST00000537392 TBC1D2BQ9UPU7 963 aa11.7□□□□□ -0.54
PMFBP1-206ENST00000537392 NOP58Q9Y2X3 529 aaKnown RBP11.7□□□□□ -0.54
PMFBP1-206ENST00000537392 SBF2Q86WG5 1849 aa11.7□□□□□ -0.54
PMFBP1-206ENST00000537392 RAB11FIP3O75154 756 aa11.7□□□□□ -0.54
PMFBP1-206ENST00000537392 RABL6Q3YEC7 729 aaPredicted RBP11.7□□□□□ -0.54
PMFBP1-206ENST00000537392 BCL11BQ9C0K0 894 aaPredicted RBP11.7□□□□□ -0.54
PMFBP1-206ENST00000537392 BCL11AQ9H165 835 aa11.7□□□□□ -0.54
PMFBP1-206ENST00000537392 HSP90AB3PQ58FF7 597 aa11.69□□□□□ -0.54
PMFBP1-206ENST00000537392 CNTNAP4Q9C0A0 1308 aa11.69□□□□□ -0.54
PMFBP1-206ENST00000537392 MYH14Q7Z406 1995 aaKnown RBP11.69□□□□□ -0.54
PMFBP1-206ENST00000537392 HSP90AB4PQ58FF6 505 aa11.69□□□□□ -0.54
PMFBP1-206ENST00000537392 FAM196AQ6ZSG2 479 aa11.69□□□□□ -0.54
PMFBP1-206ENST00000537392 PA2G4Q9UQ80 394 aaKnown RBP11.69□□□□□ -0.54
PMFBP1-206ENST00000537392 BRWD3Q6RI45 1802 aa11.68□□□□□ -0.54
PMFBP1-206ENST00000537392 GPTP24298 496 aa11.68□□□□□ -0.54
PMFBP1-206ENST00000537392 FOXO4P98177 505 aa11.68□□□□□ -0.54
PMFBP1-206ENST00000537392 BMP2KLQ5H9B9 411 aa11.68□□□□□ -0.54
PMFBP1-206ENST00000537392 RTL5Q5HYW3 569 aaPredicted RBP11.68□□□□□ -0.54
PMFBP1-206ENST00000537392 NLRP10Q86W26 655 aa11.68□□□□□ -0.54
PMFBP1-206ENST00000537392 RHPN1Q8TCX5 695 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms