RNA–Protein interactions for RNA: ENST00000536780.6

MIR9-3HG-201, Transcript of MIR9-3 host gene, humanhuman

TSL 3 BASIC

Gene MIR9-3HG, Length 4,778 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR9-3HG-201ENST00000536780 RPGRQ92834 1020 aaKnown RBP16.32■□□□□ 0.2
MIR9-3HG-201ENST00000536780 TBC1D32Q96NH3 1257 aa16.32■□□□□ 0.2
MIR9-3HG-201ENST00000536780 CEP85Q6P2H3 762 aa16.31■□□□□ 0.2
MIR9-3HG-201ENST00000536780 NUP133Q8WUM0 1156 aa16.31■□□□□ 0.2
MIR9-3HG-201ENST00000536780 RNF41Q9H4P4 317 aaPredicted RBP16.31■□□□□ 0.2
MIR9-3HG-201ENST00000536780 HMG20BQ9P0W2 317 aa16.31■□□□□ 0.2
MIR9-3HG-201ENST00000536780 NOL7Q9UMY1 257 aaKnown RBP16.31■□□□□ 0.2
MIR9-3HG-201ENST00000536780 SLAIN2Q9P270 581 aa16.31■□□□□ 0.2
MIR9-3HG-201ENST00000536780 ABCA9Q8IUA7 1624 aa16.31■□□□□ 0.2
MIR9-3HG-201ENST00000536780 ATP2B1P20020 1258 aa16.31■□□□□ 0.2
MIR9-3HG-201ENST00000536780 TSPY26PQ9H489 355 aa16.31■□□□□ 0.2
MIR9-3HG-201ENST00000536780 ANKIB1Q9P2G1 1089 aa16.31■□□□□ 0.2
MIR9-3HG-201ENST00000536780 LIMCH1Q9UPQ0 1083 aa16.31■□□□□ 0.2
MIR9-3HG-201ENST00000536780 ATP6V1AP38606 617 aa16.31■□□□□ 0.2
MIR9-3HG-201ENST00000536780 KRT24Q2M2I5 525 aa16.31■□□□□ 0.2
MIR9-3HG-201ENST00000536780 SLF2Q8IX21 1173 aa16.31■□□□□ 0.2
MIR9-3HG-201ENST00000536780 TSPOAP1O95153 1857 aa16.31■□□□□ 0.2
MIR9-3HG-201ENST00000536780 CCDC196A0A1B0GTZ2 297 aa16.3■□□□□ 0.2
MIR9-3HG-201ENST00000536780 DDX46Q7L014 1031 aaKnown RBP16.3■□□□□ 0.2
MIR9-3HG-201ENST00000536780 KIAA0232Q92628 1395 aa16.3■□□□□ 0.2
MIR9-3HG-201ENST00000536780 ZFYP08048 801 aaPredicted RBP16.3■□□□□ 0.2
MIR9-3HG-201ENST00000536780 ZNF790Q6PG37 636 aa16.3■□□□□ 0.2
MIR9-3HG-201ENST00000536780 CEP89Q96ST8 783 aa16.3■□□□□ 0.2
MIR9-3HG-201ENST00000536780 NPHP4O75161 1426 aaPredicted RBP16.3■□□□□ 0.2
MIR9-3HG-201ENST00000536780 SOGA3Q5TF21 947 aa16.3■□□□□ 0.2
MIR9-3HG-201ENST00000536780 LMBR1LQ6UX01 489 aa16.3■□□□□ 0.2
MIR9-3HG-201ENST00000536780 ZNF213O14771 459 aa16.29■□□□□ 0.2
MIR9-3HG-201ENST00000536780 RFC4P35249 363 aa16.29■□□□□ 0.2
MIR9-3HG-201ENST00000536780 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.29■□□□□ 0.2
MIR9-3HG-201ENST00000536780 SDSP20132 328 aa16.29■□□□□ 0.2
MIR9-3HG-201ENST00000536780 DZIP1Q86YF9 867 aaKnown RBP16.29■□□□□ 0.2
MIR9-3HG-201ENST00000536780 PCMTD1Q96MG8 357 aaPredicted RBP16.29■□□□□ 0.2
MIR9-3HG-201ENST00000536780 TMOD2Q9NZR1 351 aa16.29■□□□□ 0.2
MIR9-3HG-201ENST00000536780 TTC41PQ6P2S7 1318 aa16.29■□□□□ 0.2
MIR9-3HG-201ENST00000536780 ME1P48163 572 aa16.29■□□□□ 0.2
MIR9-3HG-201ENST00000536780 HMGN5P82970 282 aaKnown RBP16.29■□□□□ 0.2
MIR9-3HG-201ENST00000536780 BTG4Q9NY30 223 aa16.29■□□□□ 0.2
MIR9-3HG-201ENST00000536780 GOLIM4O00461 696 aa16.29■□□□□ 0.2
MIR9-3HG-201ENST00000536780 RBM5P52756 815 aaKnown RBP eCLIP16.28■□□□□ 0.2
MIR9-3HG-201ENST00000536780 TBC1D2Q9BYX2 928 aa16.28■□□□□ 0.2
MIR9-3HG-201ENST00000536780 ZBTB7BO15156 539 aaPredicted RBP16.28■□□□□ 0.2
MIR9-3HG-201ENST00000536780 LDHCP07864 332 aa16.28■□□□□ 0.2
MIR9-3HG-201ENST00000536780 CCDC192P0DO97 292 aa16.28■□□□□ 0.2
MIR9-3HG-201ENST00000536780 PIP4K2AP48426 406 aaPredicted RBP16.28■□□□□ 0.2
MIR9-3HG-201ENST00000536780 C8orf37Q96NL8 207 aa16.28■□□□□ 0.2
MIR9-3HG-201ENST00000536780 SPATA32Q96LK8 384 aa16.27■□□□□ 0.2
MIR9-3HG-201ENST00000536780 TNNQ9UQP3 1299 aa16.27■□□□□ 0.2
MIR9-3HG-201ENST00000536780 RNF123Q5XPI4 1314 aa16.27■□□□□ 0.2
MIR9-3HG-201ENST00000536780 NBPF6Q5VWK0 638 aa16.27■□□□□ 0.2
MIR9-3HG-201ENST00000536780 SAMD1Q6SPF0 538 aaPredicted RBP16.27■□□□□ 0.2
MIR9-3HG-201ENST00000536780 NBPF4Q96M43 638 aa16.27■□□□□ 0.2
MIR9-3HG-201ENST00000536780 USP5P45974 858 aa16.27■□□□□ 0.2
MIR9-3HG-201ENST00000536780 ANAPC15P60006 121 aa16.27■□□□□ 0.2
MIR9-3HG-201ENST00000536780 NBPF5PQ86XG9 351 aaPredicted RBP16.27■□□□□ 0.2
MIR9-3HG-201ENST00000536780 CCDC39Q9UFE4 941 aa16.27■□□□□ 0.19
MIR9-3HG-201ENST00000536780 KDM4AO75164 1064 aa16.26■□□□□ 0.19
MIR9-3HG-201ENST00000536780 ATP2B2Q01814 1243 aa16.26■□□□□ 0.19
MIR9-3HG-201ENST00000536780 CCDC83Q8IWF9 413 aa16.26■□□□□ 0.19
MIR9-3HG-201ENST00000536780 FAM13BQ9NYF5 915 aa16.26■□□□□ 0.19
MIR9-3HG-201ENST00000536780 CROCC2H7BZ55 1655 aa16.26■□□□□ 0.19
MIR9-3HG-201ENST00000536780 CEBPZQ03701 1054 aaKnown RBP16.26■□□□□ 0.19
MIR9-3HG-201ENST00000536780 ATP2B3Q16720 1220 aa16.26■□□□□ 0.19
MIR9-3HG-201ENST00000536780 SPTY2D1Q68D10 685 aaPredicted RBP16.26■□□□□ 0.19
MIR9-3HG-201ENST00000536780 STK11IPQ8N1F8 1099 aa16.26■□□□□ 0.19
MIR9-3HG-201ENST00000536780 CDK5RAP3Q96JB5 506 aa16.26■□□□□ 0.19
MIR9-3HG-201ENST00000536780 SLC52A2Q9HAB3 445 aa16.26■□□□□ 0.19
MIR9-3HG-201ENST00000536780 ROBO2Q9HCK4 1378 aa16.26■□□□□ 0.19
MIR9-3HG-201ENST00000536780 IQCA1Q86XH1 822 aa16.26■□□□□ 0.19
MIR9-3HG-201ENST00000536780 DZIP3Q86Y13 1208 aaKnown RBP16.26■□□□□ 0.19
MIR9-3HG-201ENST00000536780 RNF214Q8ND24 703 aa16.26■□□□□ 0.19
MIR9-3HG-201ENST00000536780 PPP1R1BQ9UD71 204 aaPredicted RBP16.26■□□□□ 0.19
MIR9-3HG-201ENST00000536780 TNMDQ9H2S6 317 aa16.25■□□□□ 0.19
MIR9-3HG-201ENST00000536780 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.25■□□□□ 0.19
MIR9-3HG-201ENST00000536780 ZSCAN29Q8IWY8 852 aaPredicted RBP16.25■□□□□ 0.19
MIR9-3HG-201ENST00000536780 SETDB2Q96T68 719 aa16.25■□□□□ 0.19
MIR9-3HG-201ENST00000536780 RTL1A6NKG5 1358 aa16.25■□□□□ 0.19
MIR9-3HG-201ENST00000536780 KIF24Q5T7B8 1368 aa16.25■□□□□ 0.19
MIR9-3HG-201ENST00000536780 ACSBG1Q96GR2 724 aa16.25■□□□□ 0.19
MIR9-3HG-201ENST00000536780 UTP14AQ9BVJ6 771 aaKnown RBP16.25■□□□□ 0.19
MIR9-3HG-201ENST00000536780 MINDY4BA8MYZ0 360 aa16.25■□□□□ 0.19
MIR9-3HG-201ENST00000536780 DHX8Q14562 1220 aaKnown RBP16.25■□□□□ 0.19
MIR9-3HG-201ENST00000536780 ANKRD18AQ8IVF6 992 aa16.25■□□□□ 0.19
MIR9-3HG-201ENST00000536780 MAP3K4Q9Y6R4 1608 aa16.25■□□□□ 0.19
MIR9-3HG-201ENST00000536780 CDC42BPBQ9Y5S2 1711 aa16.24■□□□□ 0.19
MIR9-3HG-201ENST00000536780 NLRP3Q96P20 1036 aa16.24■□□□□ 0.19
MIR9-3HG-201ENST00000536780 NYXQ9GZU5 481 aa16.24■□□□□ 0.19
MIR9-3HG-201ENST00000536780 SCAND2PQ9GZW5 306 aaPredicted RBP16.24■□□□□ 0.19
MIR9-3HG-201ENST00000536780 POLR3DP05423 398 aaPredicted RBP16.24■□□□□ 0.19
MIR9-3HG-201ENST00000536780 PLBD2Q8NHP8 589 aa16.24■□□□□ 0.19
MIR9-3HG-201ENST00000536780 PHAXQ9H814 394 aaKnown RBP16.24■□□□□ 0.19
MIR9-3HG-201ENST00000536780 DACH1Q9UI36 760 aa16.24■□□□□ 0.19
MIR9-3HG-201ENST00000536780 ST5P78524 1137 aa16.23■□□□□ 0.19
MIR9-3HG-201ENST00000536780 JARID2Q92833 1246 aaPredicted RBP16.23■□□□□ 0.19
MIR9-3HG-201ENST00000536780 ESYT1Q9BSJ8 1104 aa16.23■□□□□ 0.19
MIR9-3HG-201ENST00000536780 MKNK2Q9HBH9 465 aa16.23■□□□□ 0.19
MIR9-3HG-201ENST00000536780 USP6P35125 1406 aa16.23■□□□□ 0.19
MIR9-3HG-201ENST00000536780 CWF19L2Q2TBE0 894 aaKnown RBP16.23■□□□□ 0.19
MIR9-3HG-201ENST00000536780 RNF17Q9BXT8 1623 aaKnown RBP16.23■□□□□ 0.19
MIR9-3HG-201ENST00000536780 TMEM94Q12767 1356 aa16.23■□□□□ 0.19
MIR9-3HG-201ENST00000536780 NOC3LQ8WTT2 800 aaKnown RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms