RNA–Protein interactions for RNA: ENST00000535936.1

PAAF1-206, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 383 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-206ENST00000535936 SCN11AQ9UI33 1791 aa12.19□□□□□ -0.46
PAAF1-206ENST00000535936 ARFGEF1Q9Y6D6 1849 aa12.18□□□□□ -0.46
PAAF1-206ENST00000535936 MYH14Q7Z406 1995 aaKnown RBP12.18□□□□□ -0.46
PAAF1-206ENST00000535936 GLTPD2A6NH11 291 aa12.18□□□□□ -0.46
PAAF1-206ENST00000535936 ZNF790Q6PG37 636 aa12.18□□□□□ -0.46
PAAF1-206ENST00000535936 CNKSR1Q969H4 720 aa12.18□□□□□ -0.46
PAAF1-206ENST00000535936 KLRG1Q96E93 195 aa12.18□□□□□ -0.46
PAAF1-206ENST00000535936 SETDB2Q96T68 719 aa12.18□□□□□ -0.46
PAAF1-206ENST00000535936 BRIP1Q9BX63 1249 aa12.18□□□□□ -0.46
PAAF1-206ENST00000535936 MRC1P22897 1456 aa12.18□□□□□ -0.46
PAAF1-206ENST00000535936 NPC1L1Q9UHC9 1359 aa12.18□□□□□ -0.46
PAAF1-206ENST00000535936 HEG1Q9ULI3 1381 aa12.18□□□□□ -0.46
PAAF1-206ENST00000535936 KCPQ6ZWJ8 1503 aa12.17□□□□□ -0.46
PAAF1-206ENST00000535936 EIF5P55010 431 aaKnown RBP12.17□□□□□ -0.46
PAAF1-206ENST00000535936 TJP1Q07157 1748 aa12.17□□□□□ -0.46
PAAF1-206ENST00000535936 CARMIL3Q8ND23 1372 aa12.17□□□□□ -0.46
PAAF1-206ENST00000535936 BTBD11A6QL63 1104 aa12.16□□□□□ -0.46
PAAF1-206ENST00000535936 NUBP1P53384 320 aa12.16□□□□□ -0.46
PAAF1-206ENST00000535936 CNGB1Q14028 1251 aaPredicted RBP12.16□□□□□ -0.46
PAAF1-206ENST00000535936 CNBD1Q8NA66 436 aa12.16□□□□□ -0.46
PAAF1-206ENST00000535936 KIAA1551Q9HCM1 1747 aa12.16□□□□□ -0.46
PAAF1-206ENST00000535936 PER1O15534 1290 aaPredicted RBP12.15□□□□□ -0.46
PAAF1-206ENST00000535936 RASSF7Q02833 373 aa12.15□□□□□ -0.46
PAAF1-206ENST00000535936 ERFEQ4G0M1 354 aa12.15□□□□□ -0.46
PAAF1-206ENST00000535936 DNAJC5GQ8N7S2 189 aa12.15□□□□□ -0.46
PAAF1-206ENST00000535936 ZNF496Q96IT1 587 aaPredicted RBP12.15□□□□□ -0.46
PAAF1-206ENST00000535936 VASPP50552 380 aaPredicted RBP12.14□□□□□ -0.47
PAAF1-206ENST00000535936 DZIP3Q86Y13 1208 aaKnown RBP12.14□□□□□ -0.47
PAAF1-206ENST00000535936 DCBLD2Q96PD2 775 aa12.14□□□□□ -0.47
PAAF1-206ENST00000535936 TAOK3Q9H2K8 898 aa12.14□□□□□ -0.47
PAAF1-206ENST00000535936 TBC1D2BQ9UPU7 963 aa12.14□□□□□ -0.47
PAAF1-206ENST00000535936 BRCA1P38398 1863 aaKnown RBP12.14□□□□□ -0.47
PAAF1-206ENST00000535936 TNRC6CQ9HCJ0 1690 aaKnown RBP12.13□□□□□ -0.47
PAAF1-206ENST00000535936 IQCA1LA6NCM1 817 aa12.13□□□□□ -0.47
PAAF1-206ENST00000535936 C21orf2O43822 256 aa12.13□□□□□ -0.47
PAAF1-206ENST00000535936 SNRPA1P09661 255 aaKnown RBP12.13□□□□□ -0.47
PAAF1-206ENST00000535936 GTF2E1P29083 439 aaPredicted RBP12.13□□□□□ -0.47
PAAF1-206ENST00000535936 TBC1D9BQ66K14 1250 aa12.13□□□□□ -0.47
PAAF1-206ENST00000535936 STYK1Q6J9G0 422 aa12.13□□□□□ -0.47
PAAF1-206ENST00000535936 CLEC4GQ6UXB4 293 aa12.13□□□□□ -0.47
PAAF1-206ENST00000535936 MASTLQ96GX5 879 aa12.13□□□□□ -0.47
PAAF1-206ENST00000535936 BCL2L12Q9HB09 334 aa12.13□□□□□ -0.47
PAAF1-206ENST00000535936 HTATSF1O43719 755 aaKnown RBP12.12□□□□□ -0.47
PAAF1-206ENST00000535936 U2AF1L5P0DN76 240 aaPredicted RBP12.12□□□□□ -0.47
PAAF1-206ENST00000535936 PRKAR2BP31323 418 aa12.12□□□□□ -0.47
PAAF1-206ENST00000535936 U2AF1Q01081 240 aaKnown RBP eCLIP12.12□□□□□ -0.47
PAAF1-206ENST00000535936 PRR5LQ6MZQ0 368 aa12.12□□□□□ -0.47
PAAF1-206ENST00000535936 TPTE2Q6XPS3 522 aa12.12□□□□□ -0.47
PAAF1-206ENST00000535936 NBPF5PQ86XG9 351 aaPredicted RBP12.12□□□□□ -0.47
PAAF1-206ENST00000535936 JMYQ8N9B5 988 aa12.12□□□□□ -0.47
PAAF1-206ENST00000535936 IL17REQ8NFR9 667 aa12.12□□□□□ -0.47
PAAF1-206ENST00000535936 PNNQ9H307 717 aaKnown RBP12.12□□□□□ -0.47
PAAF1-206ENST00000535936 RGL2O15211 777 aa12.11□□□□□ -0.47
PAAF1-206ENST00000535936 PNISRQ8TF01 805 aaKnown RBP12.11□□□□□ -0.47
PAAF1-206ENST00000535936 MS4A3Q96HJ5 214 aa12.11□□□□□ -0.47
PAAF1-206ENST00000535936 LTBP3Q9NS15 1303 aa12.11□□□□□ -0.47
PAAF1-206ENST00000535936 A1BGP04217 495 aa12.1□□□□□ -0.47
PAAF1-206ENST00000535936 ALDH1B1P30837 517 aa12.1□□□□□ -0.47
PAAF1-206ENST00000535936 CCDC93Q567U6 631 aa12.1□□□□□ -0.47
PAAF1-206ENST00000535936 TMX4Q9H1E5 349 aaPredicted RBP12.1□□□□□ -0.47
PAAF1-206ENST00000535936 WDR90Q96KV7 1748 aa12.1□□□□□ -0.47
PAAF1-206ENST00000535936 GOLGB1Q14789 3259 aaKnown RBP12.09□□□□□ -0.47
PAAF1-206ENST00000535936 NFKBIEO00221 500 aa12.09□□□□□ -0.47
PAAF1-206ENST00000535936 CAMTA2O94983 1202 aa12.09□□□□□ -0.47
PAAF1-206ENST00000535936 NPR1P16066 1061 aa12.09□□□□□ -0.47
PAAF1-206ENST00000535936 RTKN2Q8IZC4 609 aa12.09□□□□□ -0.47
PAAF1-206ENST00000535936 KIF12Q96FN5 646 aa12.09□□□□□ -0.47
PAAF1-206ENST00000535936 NRXN2Q9P2S2 1712 aa12.08□□□□□ -0.47
PAAF1-206ENST00000535936 CEMIPQ8WUJ3 1361 aa12.08□□□□□ -0.48
PAAF1-206ENST00000535936 ADAMTS7Q9UKP4 1686 aa12.08□□□□□ -0.48
PAAF1-206ENST00000535936 SRGNP10124 158 aa12.08□□□□□ -0.48
PAAF1-206ENST00000535936 PRPF40BQ6NWY9 871 aaKnown RBP12.08□□□□□ -0.48
PAAF1-206ENST00000535936 TNS4Q8IZW8 715 aa12.08□□□□□ -0.48
PAAF1-206ENST00000535936 NYXQ9GZU5 481 aa12.08□□□□□ -0.48
PAAF1-206ENST00000535936 RSPH6AQ9H0K4 717 aa12.08□□□□□ -0.48
PAAF1-206ENST00000535936 AFDNP55196 1824 aaKnown RBP12.07□□□□□ -0.48
PAAF1-206ENST00000535936 TAF7Q15545 349 aaPredicted RBP12.07□□□□□ -0.48
PAAF1-206ENST00000535936 GRIPAP1Q4V328 841 aa12.07□□□□□ -0.48
PAAF1-206ENST00000535936 NIP7Q9Y221 180 aaKnown RBP eCLIP12.07□□□□□ -0.48
PAAF1-206ENST00000535936 SBF1O95248 1867 aa12.06□□□□□ -0.48
PAAF1-206ENST00000535936 UBR2Q8IWV8 1755 aa12.06□□□□□ -0.48
PAAF1-206ENST00000535936 HTRA3P83110 453 aa12.06□□□□□ -0.48
PAAF1-206ENST00000535936 CC2D2BQ6DHV5 1058 aa12.06□□□□□ -0.48
PAAF1-206ENST00000535936 KIF6Q6ZMV9 814 aa12.06□□□□□ -0.48
PAAF1-206ENST00000535936 JDP2Q8WYK2 163 aa12.06□□□□□ -0.48
PAAF1-206ENST00000535936 USP16Q9Y5T5 823 aa12.06□□□□□ -0.48
PAAF1-206ENST00000535936 DLEC1Q9Y238 1755 aa12.05□□□□□ -0.48
PAAF1-206ENST00000535936 FKBP4Q02790 459 aaKnown RBP eCLIP12.05□□□□□ -0.48
PAAF1-206ENST00000535936 PNMA8AQ86V59 439 aaPredicted RBP12.05□□□□□ -0.48
PAAF1-206ENST00000535936 LDHDQ86WU2 507 aa12.05□□□□□ -0.48
PAAF1-206ENST00000535936 CCDC24Q8N4L8 307 aa12.05□□□□□ -0.48
PAAF1-206ENST00000535936 AIDAQ96BJ3 306 aa12.05□□□□□ -0.48
PAAF1-206ENST00000535936 VIRMAQ69YN4 1812 aaKnown RBP12.04□□□□□ -0.48
PAAF1-206ENST00000535936 COL3A1P02461 1466 aaPredicted RBP12.04□□□□□ -0.48
PAAF1-206ENST00000535936 DDNO94850 711 aaPredicted RBP12.04□□□□□ -0.48
PAAF1-206ENST00000535936 HSPA1AP0DMV8 641 aaKnown RBP12.04□□□□□ -0.48
PAAF1-206ENST00000535936 HSPA1BP0DMV9 641 aaKnown RBP12.04□□□□□ -0.48
PAAF1-206ENST00000535936 MCM10Q7L590 875 aa12.04□□□□□ -0.48
PAAF1-206ENST00000535936 PHACTR3Q96KR7 559 aa12.04□□□□□ -0.48
PAAF1-206ENST00000535936 MAPK8IP3Q9UPT6 1336 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms