RNA–Protein interactions for RNA: ENST00000535871.1

CDCA3-205, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 454 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-205ENST00000535871 PALLDQ8WX93 1383 aa8.22□□□□□ -1.09
CDCA3-205ENST00000535871 RREB1Q92766 1687 aa8.22□□□□□ -1.09
CDCA3-205ENST00000535871 LOC102724428A0A0B4J2F2 783 aa8.22□□□□□ -1.09
CDCA3-205ENST00000535871 PLSCR1O15162 318 aa8.22□□□□□ -1.09
CDCA3-205ENST00000535871 IL6STP40189 918 aaPredicted RBP8.22□□□□□ -1.09
CDCA3-205ENST00000535871 SIK1P57059 783 aa8.22□□□□□ -1.09
CDCA3-205ENST00000535871 PDAP1Q13442 181 aaKnown RBP8.22□□□□□ -1.09
CDCA3-205ENST00000535871 SLC27A3Q5K4L6 730 aa8.22□□□□□ -1.09
CDCA3-205ENST00000535871 KSR2Q6VAB6 950 aa8.22□□□□□ -1.09
CDCA3-205ENST00000535871 FRAT1Q92837 279 aaPredicted RBP8.22□□□□□ -1.09
CDCA3-205ENST00000535871 RBM42Q9BTD8 480 aaKnown RBP8.22□□□□□ -1.09
CDCA3-205ENST00000535871 SLC24A3Q9HC58 644 aa8.22□□□□□ -1.09
CDCA3-205ENST00000535871 CHPF2Q9P2E5 772 aa8.22□□□□□ -1.09
CDCA3-205ENST00000535871 RGPD3A6NKT7 1758 aaPredicted RBP8.22□□□□□ -1.09
CDCA3-205ENST00000535871 RGPD4Q7Z3J3 1758 aa8.22□□□□□ -1.09
CDCA3-205ENST00000535871 C5P01031 1676 aa8.21□□□□□ -1.09
CDCA3-205ENST00000535871 A0A0G2JS52 829 aa8.21□□□□□ -1.1
CDCA3-205ENST00000535871 ALDH1L1O75891 902 aa8.21□□□□□ -1.1
CDCA3-205ENST00000535871 CYP19A1P11511 503 aaPredicted RBP8.21□□□□□ -1.1
CDCA3-205ENST00000535871 MYT1Q01538 1121 aa8.21□□□□□ -1.1
CDCA3-205ENST00000535871 TRIM28Q13263 835 aaKnown RBP8.21□□□□□ -1.1
CDCA3-205ENST00000535871 BCL2L13Q9BXK5 485 aa8.21□□□□□ -1.1
CDCA3-205ENST00000535871 ZBTB40Q9NUA8 1239 aa8.21□□□□□ -1.1
CDCA3-205ENST00000535871 RGS17Q9UGC6 210 aaPredicted RBP8.21□□□□□ -1.1
CDCA3-205ENST00000535871 USP16Q9Y5T5 823 aa8.21□□□□□ -1.1
CDCA3-205ENST00000535871 CNTNAP4Q9C0A0 1308 aa8.21□□□□□ -1.1
CDCA3-205ENST00000535871 COL15A1P39059 1388 aa8.21□□□□□ -1.1
CDCA3-205ENST00000535871 LY75O60449 1722 aa8.2□□□□□ -1.1
CDCA3-205ENST00000535871 BTAF1O14981 1849 aa8.2□□□□□ -1.1
CDCA3-205ENST00000535871 BRWD3Q6RI45 1802 aa8.2□□□□□ -1.1
CDCA3-205ENST00000535871 ERVV-1B6SEH8 477 aa8.2□□□□□ -1.1
CDCA3-205ENST00000535871 ZBTB7BO15156 539 aaPredicted RBP8.2□□□□□ -1.1
CDCA3-205ENST00000535871 PLIN1O60240 522 aa8.2□□□□□ -1.1
CDCA3-205ENST00000535871 PTCD1O75127 700 aaKnown RBP8.2□□□□□ -1.1
CDCA3-205ENST00000535871 GNAI3P08754 354 aa8.2□□□□□ -1.1
CDCA3-205ENST00000535871 RLBP1P12271 317 aa8.2□□□□□ -1.1
CDCA3-205ENST00000535871 EIF2S2P20042 333 aaKnown RBP8.2□□□□□ -1.1
CDCA3-205ENST00000535871 FKBP5Q13451 457 aaPredicted RBP8.2□□□□□ -1.1
CDCA3-205ENST00000535871 E2F4Q16254 413 aa8.2□□□□□ -1.1
CDCA3-205ENST00000535871 LINS1Q8NG48 757 aa8.2□□□□□ -1.1
CDCA3-205ENST00000535871 PLBD2Q8NHP8 589 aa8.2□□□□□ -1.1
CDCA3-205ENST00000535871 DNAAF4Q8WXU2 420 aa8.2□□□□□ -1.1
CDCA3-205ENST00000535871 CLUAP1Q96AJ1 413 aa8.2□□□□□ -1.1
CDCA3-205ENST00000535871 SYTL4Q96C24 671 aaPredicted RBP8.2□□□□□ -1.1
CDCA3-205ENST00000535871 A0A087WZG4 1122 aa8.19□□□□□ -1.1
CDCA3-205ENST00000535871 NEXNQ0ZGT2 675 aa8.19□□□□□ -1.1
CDCA3-205ENST00000535871 HSP90AB3PQ58FF7 597 aa8.19□□□□□ -1.1
CDCA3-205ENST00000535871 ANKRD13DQ6ZTN6 518 aa8.19□□□□□ -1.1
CDCA3-205ENST00000535871 CCDC125Q86Z20 511 aa8.19□□□□□ -1.1
CDCA3-205ENST00000535871 COL5A3P25940 1745 aaPredicted RBP8.19□□□□□ -1.1
CDCA3-205ENST00000535871 UTYO14607 1347 aa8.19□□□□□ -1.1
CDCA3-205ENST00000535871 TJP1Q07157 1748 aa8.18□□□□□ -1.1
CDCA3-205ENST00000535871 PI4KAP2A4QPH2 592 aa8.18□□□□□ -1.1
CDCA3-205ENST00000535871 NBPF26B4DH59 902 aa8.18□□□□□ -1.1
CDCA3-205ENST00000535871 SEMA3EO15041 775 aa8.18□□□□□ -1.1
CDCA3-205ENST00000535871 KCNQ2O43526 872 aa8.18□□□□□ -1.1
CDCA3-205ENST00000535871 ATP6V1AP38606 617 aa8.18□□□□□ -1.1
CDCA3-205ENST00000535871 EIF5P55010 431 aaKnown RBP8.18□□□□□ -1.1
CDCA3-205ENST00000535871 HDAC1Q13547 482 aaPredicted RBP8.18□□□□□ -1.1
CDCA3-205ENST00000535871 BEND3Q5T5X7 828 aa8.18□□□□□ -1.1
CDCA3-205ENST00000535871 C20orf194Q5TEA3 1177 aa8.18□□□□□ -1.1
CDCA3-205ENST00000535871 NBPF14Q5TI25 921 aa8.18□□□□□ -1.1
CDCA3-205ENST00000535871 NBPF10Q6P3W6 841 aaKnown RBP8.18□□□□□ -1.1
CDCA3-205ENST00000535871 POTEAQ6S8J7 498 aa8.18□□□□□ -1.1
CDCA3-205ENST00000535871 CLEC4GQ6UXB4 293 aa8.18□□□□□ -1.1
CDCA3-205ENST00000535871 NPM2Q86SE8 214 aaKnown RBP8.18□□□□□ -1.1
CDCA3-205ENST00000535871 DNAJC10Q8IXB1 793 aa8.18□□□□□ -1.1
CDCA3-205ENST00000535871 RPAP2Q8IXW5 612 aaPredicted RBP8.18□□□□□ -1.1
CDCA3-205ENST00000535871 TMEM57Q8N5G2 664 aa8.18□□□□□ -1.1
CDCA3-205ENST00000535871 NBPF15Q8N660 670 aa8.18□□□□□ -1.1
CDCA3-205ENST00000535871 PI4KAP1Q8N8J0 262 aa8.18□□□□□ -1.1
CDCA3-205ENST00000535871 PANK1Q8TE04 598 aa8.18□□□□□ -1.1
CDCA3-205ENST00000535871 SLC4A9Q96Q91 983 aa8.18□□□□□ -1.1
CDCA3-205ENST00000535871 CRBNQ96SW2 442 aa8.18□□□□□ -1.1
CDCA3-205ENST00000535871 METTL22Q9BUU2 404 aaPredicted RBP8.18□□□□□ -1.1
CDCA3-205ENST00000535871 MFRPQ9BY79 579 aa8.18□□□□□ -1.1
CDCA3-205ENST00000535871 SRCIN1Q9C0H9 1055 aa8.18□□□□□ -1.1
CDCA3-205ENST00000535871 TSPYL2Q9H2G4 693 aaPredicted RBP8.18□□□□□ -1.1
CDCA3-205ENST00000535871 CCDC87Q9NVE4 849 aa8.18□□□□□ -1.1
CDCA3-205ENST00000535871 COG6Q9Y2V7 657 aa8.18□□□□□ -1.1
CDCA3-205ENST00000535871 ADCY9O60503 1353 aa8.18□□□□□ -1.1
CDCA3-205ENST00000535871 TESPA1A2RU30 521 aaPredicted RBP8.17□□□□□ -1.1
CDCA3-205ENST00000535871 COPS6Q7L5N1 327 aa8.17□□□□□ -1.1
CDCA3-205ENST00000535871 G2E3Q7L622 706 aa8.17□□□□□ -1.1
CDCA3-205ENST00000535871 ITPRIPQ8IWB1 547 aa8.17□□□□□ -1.1
CDCA3-205ENST00000535871 REM2Q8IYK8 340 aaPredicted RBP8.17□□□□□ -1.1
CDCA3-205ENST00000535871 EXOC6Q8TAG9 804 aa8.17□□□□□ -1.1
CDCA3-205ENST00000535871 ACSBG1Q96GR2 724 aa8.17□□□□□ -1.1
CDCA3-205ENST00000535871 PHAXQ9H814 394 aaKnown RBP8.17□□□□□ -1.1
CDCA3-205ENST00000535871 PRAMEF22A3QJZ6 481 aa8.16□□□□□ -1.1
CDCA3-205ENST00000535871 RPS6KA4O75676 772 aa8.16□□□□□ -1.1
CDCA3-205ENST00000535871 A1BGP04217 495 aa8.16□□□□□ -1.1
CDCA3-205ENST00000535871 HSP90B1P14625 803 aaKnown RBP8.16□□□□□ -1.1
CDCA3-205ENST00000535871 CRKLP46109 303 aaKnown RBP8.16□□□□□ -1.1
CDCA3-205ENST00000535871 PROSER3Q2NL68 480 aa8.16□□□□□ -1.1
CDCA3-205ENST00000535871 INTS5Q6P9B9 1019 aaKnown RBP8.16□□□□□ -1.1
CDCA3-205ENST00000535871 GIGYF2Q6Y7W6 1299 aaKnown RBP8.16□□□□□ -1.1
CDCA3-205ENST00000535871 KIF6Q6ZMV9 814 aa8.16□□□□□ -1.1
CDCA3-205ENST00000535871 MAP3K15Q6ZN16 1313 aa8.16□□□□□ -1.1
CDCA3-205ENST00000535871 CENPQQ7L2Z9 268 aaPredicted RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms