RNA–Protein interactions for RNA: ENST00000534753.5

CCDC90B-219, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-219ENST00000534753 AMIGO3Q86WK7 504 aa11.91□□□□□ -0.5
CCDC90B-219ENST00000534753 FLAD1Q8NFF5 587 aa11.91□□□□□ -0.5
CCDC90B-219ENST00000534753 PHACTR3Q96KR7 559 aa11.91□□□□□ -0.5
CCDC90B-219ENST00000534753 SLC4A9Q96Q91 983 aa11.91□□□□□ -0.5
CCDC90B-219ENST00000534753 SLC52A2Q9HAB3 445 aa11.91□□□□□ -0.5
CCDC90B-219ENST00000534753 GNAT3A8MTJ3 354 aa11.9□□□□□ -0.5
CCDC90B-219ENST00000534753 PDIA6Q15084 440 aa11.9□□□□□ -0.5
CCDC90B-219ENST00000534753 GAS2L2Q8NHY3 880 aa11.9□□□□□ -0.5
CCDC90B-219ENST00000534753 SYT17Q9BSW7 474 aa11.9□□□□□ -0.5
CCDC90B-219ENST00000534753 QSER1Q2KHR3 1735 aa11.89□□□□□ -0.51
CCDC90B-219ENST00000534753 TEFQ10587 303 aa11.89□□□□□ -0.51
CCDC90B-219ENST00000534753 L3MBTL3Q96JM7 780 aaPredicted RBP11.89□□□□□ -0.51
CCDC90B-219ENST00000534753 RSPH6AQ9H0K4 717 aa11.89□□□□□ -0.51
CCDC90B-219ENST00000534753 RTCBQ9Y3I0 505 aaKnown RBP11.89□□□□□ -0.51
CCDC90B-219ENST00000534753 SCN11AQ9UI33 1791 aa11.89□□□□□ -0.51
CCDC90B-219ENST00000534753 MAP3K5Q99683 1374 aa11.89□□□□□ -0.51
CCDC90B-219ENST00000534753 NEFMP07197 916 aa11.88□□□□□ -0.51
CCDC90B-219ENST00000534753 ZEB1P37275 1124 aaPredicted RBP11.88□□□□□ -0.51
CCDC90B-219ENST00000534753 TRAPPC3LQ5T215 181 aa11.88□□□□□ -0.51
CCDC90B-219ENST00000534753 ZMYND10O75800 440 aa11.87□□□□□ -0.51
CCDC90B-219ENST00000534753 SSFA2P28290 1259 aa11.87□□□□□ -0.51
CCDC90B-219ENST00000534753 BRPF1P55201 1214 aaPredicted RBP11.87□□□□□ -0.51
CCDC90B-219ENST00000534753 DNAJC10Q8IXB1 793 aa11.87□□□□□ -0.51
CCDC90B-219ENST00000534753 TTC5Q8N0Z6 440 aa11.87□□□□□ -0.51
CCDC90B-219ENST00000534753 IL17REQ8NFR9 667 aa11.87□□□□□ -0.51
CCDC90B-219ENST00000534753 RTF1Q92541 710 aaKnown RBP11.87□□□□□ -0.51
CCDC90B-219ENST00000534753 SPDYE16A6NNV3 312 aaPredicted RBP11.86□□□□□ -0.51
CCDC90B-219ENST00000534753 FCHSD2O94868 740 aa11.86□□□□□ -0.51
CCDC90B-219ENST00000534753 RFC4P35249 363 aa11.86□□□□□ -0.51
CCDC90B-219ENST00000534753 CRKLP46109 303 aaKnown RBP11.86□□□□□ -0.51
CCDC90B-219ENST00000534753 RALBP1Q15311 655 aa11.86□□□□□ -0.51
CCDC90B-219ENST00000534753 MCM10Q7L590 875 aa11.86□□□□□ -0.51
CCDC90B-219ENST00000534753 GPIHBP1Q8IV16 184 aa11.86□□□□□ -0.51
CCDC90B-219ENST00000534753 UBR3Q6ZT12 1888 aa11.85□□□□□ -0.51
CCDC90B-219ENST00000534753 DCTN1Q14203 1278 aa11.85□□□□□ -0.51
CCDC90B-219ENST00000534753 GPR162Q16538 588 aa11.85□□□□□ -0.51
CCDC90B-219ENST00000534753 NLGN2Q8NFZ4 835 aa11.85□□□□□ -0.51
CCDC90B-219ENST00000534753 SLC39A7Q92504 469 aa11.85□□□□□ -0.51
CCDC90B-219ENST00000534753 METRNQ9UJH8 293 aa11.85□□□□□ -0.51
CCDC90B-219ENST00000534753 VIRMAQ69YN4 1812 aaKnown RBP11.85□□□□□ -0.51
CCDC90B-219ENST00000534753 RPS6KA4O75676 772 aa11.84□□□□□ -0.51
CCDC90B-219ENST00000534753 RC3H1Q5TC82 1133 aaKnown RBP11.84□□□□□ -0.51
CCDC90B-219ENST00000534753 WWC3Q9ULE0 1092 aa11.84□□□□□ -0.51
CCDC90B-219ENST00000534753 CNTNAP4Q9C0A0 1308 aa11.84□□□□□ -0.51
CCDC90B-219ENST00000534753 BTBD11A6QL63 1104 aa11.83□□□□□ -0.52
CCDC90B-219ENST00000534753 CANXP27824 592 aaKnown RBP11.83□□□□□ -0.52
CCDC90B-219ENST00000534753 MAP3K9P80192 1104 aa11.83□□□□□ -0.52
CCDC90B-219ENST00000534753 CCDC87Q9NVE4 849 aa11.83□□□□□ -0.52
CCDC90B-219ENST00000534753 SRP68Q9UHB9 627 aaKnown RBP11.83□□□□□ -0.52
CCDC90B-219ENST00000534753 ZNF330Q9Y3S2 320 aaPredicted RBP11.83□□□□□ -0.52
CCDC90B-219ENST00000534753 MAPK8IP3Q9UPT6 1336 aa11.83□□□□□ -0.52
CCDC90B-219ENST00000534753 KCNQ3O43525 872 aa11.82□□□□□ -0.52
CCDC90B-219ENST00000534753 MMP10P09238 476 aa11.82□□□□□ -0.52
CCDC90B-219ENST00000534753 YY1P25490 414 aa11.82□□□□□ -0.52
CCDC90B-219ENST00000534753 INTS5Q6P9B9 1019 aaKnown RBP11.82□□□□□ -0.52
CCDC90B-219ENST00000534753 MYBBP1AQ9BQG0 1328 aaKnown RBP11.82□□□□□ -0.52
CCDC90B-219ENST00000534753 MRC1P22897 1456 aa11.82□□□□□ -0.52
CCDC90B-219ENST00000534753 COL5A3P25940 1745 aaPredicted RBP11.81□□□□□ -0.52
CCDC90B-219ENST00000534753 TJP1Q07157 1748 aa11.81□□□□□ -0.52
CCDC90B-219ENST00000534753 GRXCR2A6NFK2 248 aa11.81□□□□□ -0.52
CCDC90B-219ENST00000534753 C7P10643 843 aa11.81□□□□□ -0.52
CCDC90B-219ENST00000534753 CYP19A1P11511 503 aaPredicted RBP11.81□□□□□ -0.52
CCDC90B-219ENST00000534753 NEUROD2Q15784 382 aa11.81□□□□□ -0.52
CCDC90B-219ENST00000534753 ZNF790Q6PG37 636 aa11.81□□□□□ -0.52
CCDC90B-219ENST00000534753 ZNF496Q96IT1 587 aaPredicted RBP11.81□□□□□ -0.52
CCDC90B-219ENST00000534753 MIS18AQ9NYP9 233 aa11.81□□□□□ -0.52
CCDC90B-219ENST00000534753 POTEB2H3BUK9 544 aa11.8□□□□□ -0.52
CCDC90B-219ENST00000534753 ZPR1O75312 459 aa11.8□□□□□ -0.52
CCDC90B-219ENST00000534753 STARD3NLO95772 234 aa11.8□□□□□ -0.52
CCDC90B-219ENST00000534753 WDR43Q15061 677 aaKnown RBP eCLIP11.8□□□□□ -0.52
CCDC90B-219ENST00000534753 CCDC146Q8IYE0 955 aa11.8□□□□□ -0.52
CCDC90B-219ENST00000534753 NLGN1Q8N2Q7 840 aa11.8□□□□□ -0.52
CCDC90B-219ENST00000534753 FMNL2Q96PY5 1086 aa11.8□□□□□ -0.52
CCDC90B-219ENST00000534753 PNNQ9H307 717 aaKnown RBP11.8□□□□□ -0.52
CCDC90B-219ENST00000534753 ZNF831Q5JPB2 1677 aa11.8□□□□□ -0.52
CCDC90B-219ENST00000534753 KCPQ6ZWJ8 1503 aa11.8□□□□□ -0.52
CCDC90B-219ENST00000534753 ADAMTS7Q9UKP4 1686 aa11.79□□□□□ -0.52
CCDC90B-219ENST00000534753 GYS1P13807 737 aa11.79□□□□□ -0.52
CCDC90B-219ENST00000534753 NFE2L2Q16236 605 aa11.79□□□□□ -0.52
CCDC90B-219ENST00000534753 OXER1Q8TDS5 423 aa11.79□□□□□ -0.52
CCDC90B-219ENST00000534753 THUMPD2Q9BTF0 503 aaKnown RBP11.79□□□□□ -0.52
CCDC90B-219ENST00000534753 ZBTB1Q9Y2K1 713 aa11.79□□□□□ -0.52
CCDC90B-219ENST00000534753 PARP3Q9Y6F1 533 aa11.79□□□□□ -0.52
CCDC90B-219ENST00000534753 COL24A1Q17RW2 1714 aa11.79□□□□□ -0.52
CCDC90B-219ENST00000534753 MYH14Q7Z406 1995 aaKnown RBP11.79□□□□□ -0.52
CCDC90B-219ENST00000534753 USPL1Q5W0Q7 1092 aa11.78□□□□□ -0.52
CCDC90B-219ENST00000534753 NPM2Q86SE8 214 aaKnown RBP11.78□□□□□ -0.52
CCDC90B-219ENST00000534753 PLEKHF1Q96S99 279 aa11.78□□□□□ -0.52
CCDC90B-219ENST00000534753 RRP7AQ9Y3A4 280 aaKnown RBP11.78□□□□□ -0.52
CCDC90B-219ENST00000534753 CD2APQ9Y5K6 639 aa11.78□□□□□ -0.52
CCDC90B-219ENST00000534753 CEMIPQ8WUJ3 1361 aa11.78□□□□□ -0.52
CCDC90B-219ENST00000534753 HEG1Q9ULI3 1381 aa11.78□□□□□ -0.52
CCDC90B-219ENST00000534753 PRAMEF22A3QJZ6 481 aa11.77□□□□□ -0.53
CCDC90B-219ENST00000534753 ZNF316A6NFI3 1004 aaPredicted RBP11.77□□□□□ -0.53
CCDC90B-219ENST00000534753 HTATSF1O43719 755 aaKnown RBP11.77□□□□□ -0.53
CCDC90B-219ENST00000534753 A1BGP04217 495 aa11.77□□□□□ -0.53
CCDC90B-219ENST00000534753 PIP4K2AP48426 406 aaPredicted RBP11.77□□□□□ -0.53
CCDC90B-219ENST00000534753 TAF7Q15545 349 aaPredicted RBP11.77□□□□□ -0.53
CCDC90B-219ENST00000534753 TEX13AQ9BXU3 409 aaPredicted RBP11.77□□□□□ -0.53
CCDC90B-219ENST00000534753 PRKRIP1Q9H875 184 aaPredicted RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms