RNA–Protein interactions for RNA: ENST00000534548.6

NCAPD3-214, Transcript of non-SMC condensin II complex subunit D3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NCAPD3, Length 5,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-214ENST00000534548 TEFQ10587 303 aa11.95□□□□□ -0.5
NCAPD3-214ENST00000534548 SMARCC1Q92922 1105 aaPredicted RBP11.95□□□□□ -0.5
NCAPD3-214ENST00000534548 CCDC47Q96A33 483 aaKnown RBP11.95□□□□□ -0.5
NCAPD3-214ENST00000534548 PHACTR3Q96KR7 559 aa11.95□□□□□ -0.5
NCAPD3-214ENST00000534548 DACH1Q9UI36 760 aa11.95□□□□□ -0.5
NCAPD3-214ENST00000534548 FCHSD2O94868 740 aa11.95□□□□□ -0.5
NCAPD3-214ENST00000534548 CLSTN1O94985 981 aa11.95□□□□□ -0.5
NCAPD3-214ENST00000534548 TSPYL6Q8N831 410 aa11.95□□□□□ -0.5
NCAPD3-214ENST00000534548 DNAI1Q9UI46 699 aa11.95□□□□□ -0.5
NCAPD3-214ENST00000534548 KIF1BO60333 1816 aa11.95□□□□□ -0.5
NCAPD3-214ENST00000534548 RRP12Q5JTH9 1297 aaKnown RBP11.95□□□□□ -0.5
NCAPD3-214ENST00000534548 KIF5CO60282 957 aa11.94□□□□□ -0.5
NCAPD3-214ENST00000534548 CAPN2P17655 700 aa11.94□□□□□ -0.5
NCAPD3-214ENST00000534548 CCDC150Q8NCX0 1101 aa11.94□□□□□ -0.5
NCAPD3-214ENST00000534548 CEP89Q96ST8 783 aa11.94□□□□□ -0.5
NCAPD3-214ENST00000534548 ZRANB1Q9UGI0 708 aa11.94□□□□□ -0.5
NCAPD3-214ENST00000534548 POTEB2H3BUK9 544 aa11.94□□□□□ -0.5
NCAPD3-214ENST00000534548 EPB41L2O43491 1005 aaKnown RBP11.94□□□□□ -0.5
NCAPD3-214ENST00000534548 AEBP2Q6ZN18 517 aaPredicted RBP11.94□□□□□ -0.5
NCAPD3-214ENST00000534548 ZBTB40Q9NUA8 1239 aa11.94□□□□□ -0.5
NCAPD3-214ENST00000534548 DHX16O60231 1041 aaKnown RBP11.94□□□□□ -0.5
NCAPD3-214ENST00000534548 RRS1Q15050 365 aaKnown RBP11.94□□□□□ -0.5
NCAPD3-214ENST00000534548 MAP9Q49MG5 647 aa11.94□□□□□ -0.5
NCAPD3-214ENST00000534548 ERO1AQ96HE7 468 aa11.94□□□□□ -0.5
NCAPD3-214ENST00000534548 TMEM63CQ9P1W3 806 aa11.94□□□□□ -0.5
NCAPD3-214ENST00000534548 NGDNQ8NEJ9 315 aaKnown RBP11.94□□□□□ -0.5
NCAPD3-214ENST00000534548 PLEKHF1Q96S99 279 aa11.94□□□□□ -0.5
NCAPD3-214ENST00000534548 ZSWIM4Q9H7M6 989 aa11.94□□□□□ -0.5
NCAPD3-214ENST00000534548 EFCAB6Q5THR3 1501 aa11.93□□□□□ -0.5
NCAPD3-214ENST00000534548 NFE2L2Q16236 605 aa11.93□□□□□ -0.5
NCAPD3-214ENST00000534548 TYRO3Q06418 890 aa11.93□□□□□ -0.5
NCAPD3-214ENST00000534548 FAM83GA6ND36 823 aa11.93□□□□□ -0.5
NCAPD3-214ENST00000534548 ATP2B1P20020 1258 aa11.93□□□□□ -0.5
NCAPD3-214ENST00000534548 GNG11P61952 73 aa11.93□□□□□ -0.5
NCAPD3-214ENST00000534548 DNAJC25Q9H1X3 360 aa11.93□□□□□ -0.5
NCAPD3-214ENST00000534548 MCM6Q14566 821 aa11.93□□□□□ -0.5
NCAPD3-214ENST00000534548 CT47A1Q5JQC4 288 aaPredicted RBP11.93□□□□□ -0.5
NCAPD3-214ENST00000534548 CCDC181Q5TID7 509 aa11.93□□□□□ -0.5
NCAPD3-214ENST00000534548 CCDC148Q8NFR7 591 aa11.93□□□□□ -0.5
NCAPD3-214ENST00000534548 ERC1Q8IUD2 1116 aa11.92□□□□□ -0.5
NCAPD3-214ENST00000534548 F13A1P00488 732 aa11.92□□□□□ -0.5
NCAPD3-214ENST00000534548 DNM1Q05193 864 aaKnown RBP11.92□□□□□ -0.5
NCAPD3-214ENST00000534548 IQCEQ6IPM2 695 aa11.92□□□□□ -0.5
NCAPD3-214ENST00000534548 NME9Q86XW9 330 aa11.92□□□□□ -0.5
NCAPD3-214ENST00000534548 MICALL1Q8N3F8 863 aa11.92□□□□□ -0.5
NCAPD3-214ENST00000534548 DACT1Q9NYF0 836 aa11.92□□□□□ -0.5
NCAPD3-214ENST00000534548 A0A1B0GUL7 405 aa11.92□□□□□ -0.5
NCAPD3-214ENST00000534548 DDX58O95786 925 aaKnown RBP11.92□□□□□ -0.5
NCAPD3-214ENST00000534548 NEUROD6Q96NK8 337 aa11.92□□□□□ -0.5
NCAPD3-214ENST00000534548 USP26Q9BXU7 913 aa11.92□□□□□ -0.5
NCAPD3-214ENST00000534548 RAB11FIP3O75154 756 aa11.91□□□□□ -0.5
NCAPD3-214ENST00000534548 RNF187Q5TA31 235 aaPredicted RBP11.91□□□□□ -0.5
NCAPD3-214ENST00000534548 LUZP1Q86V48 1076 aa11.91□□□□□ -0.5
NCAPD3-214ENST00000534548 NCKAP5LQ9HCH0 1330 aa11.91□□□□□ -0.5
NCAPD3-214ENST00000534548 CCDC69A6NI79 296 aa11.91□□□□□ -0.5
NCAPD3-214ENST00000534548 SRGAP3O43295 1099 aa11.91□□□□□ -0.5
NCAPD3-214ENST00000534548 TSHZ3Q63HK5 1081 aa11.91□□□□□ -0.5
NCAPD3-214ENST00000534548 OSCARQ8IYS5 282 aa11.91□□□□□ -0.5
NCAPD3-214ENST00000534548 SLC52A1Q9NWF4 448 aa11.91□□□□□ -0.5
NCAPD3-214ENST00000534548 ZNHIT6Q9NWK9 470 aaKnown RBP11.91□□□□□ -0.5
NCAPD3-214ENST00000534548 ELF2Q15723 593 aa11.91□□□□□ -0.5
NCAPD3-214ENST00000534548 WASHC4Q2M389 1173 aa11.91□□□□□ -0.5
NCAPD3-214ENST00000534548 SRRTQ9BXP5 876 aaKnown RBP11.91□□□□□ -0.5
NCAPD3-214ENST00000534548 NSD2O96028 1365 aa11.91□□□□□ -0.5
NCAPD3-214ENST00000534548 PPRC1Q5VV67 1664 aaKnown RBP11.91□□□□□ -0.5
NCAPD3-214ENST00000534548 GOLGA6L9A6NEM1 432 aa11.91□□□□□ -0.5
NCAPD3-214ENST00000534548 MCM3P25205 808 aa11.91□□□□□ -0.5
NCAPD3-214ENST00000534548 FSIP1Q8NA03 581 aa11.91□□□□□ -0.5
NCAPD3-214ENST00000534548 POLKQ9UBT6 870 aa11.91□□□□□ -0.5
NCAPD3-214ENST00000534548 GOLGA6L7A0A1B0GV03 622 aa11.9□□□□□ -0.5
NCAPD3-214ENST00000534548 PIP4K2AP48426 406 aaPredicted RBP11.9□□□□□ -0.5
NCAPD3-214ENST00000534548 KRT32Q14532 448 aa11.9□□□□□ -0.5
NCAPD3-214ENST00000534548 SYT10Q6XYQ8 523 aa11.9□□□□□ -0.5
NCAPD3-214ENST00000534548 C16orf71Q8IYS4 520 aaPredicted RBP11.9□□□□□ -0.5
NCAPD3-214ENST00000534548 ATAD2Q6PL18 1390 aa11.9□□□□□ -0.5
NCAPD3-214ENST00000534548 ODF2Q5BJF6 829 aa11.9□□□□□ -0.5
NCAPD3-214ENST00000534548 CCDC12Q8WUD4 166 aaPredicted RBP11.9□□□□□ -0.5
NCAPD3-214ENST00000534548 ANAPC15P60006 121 aa11.9□□□□□ -0.5
NCAPD3-214ENST00000534548 TXNDC2Q86VQ3 553 aa11.9□□□□□ -0.5
NCAPD3-214ENST00000534548 CCAR1Q8IX12 1150 aaKnown RBP11.9□□□□□ -0.5
NCAPD3-214ENST00000534548 VPS18Q9P253 973 aa11.9□□□□□ -0.5
NCAPD3-214ENST00000534548 MROH2AA6NES4 1674 aa11.9□□□□□ -0.5
NCAPD3-214ENST00000534548 BIN1O00499 593 aa11.9□□□□□ -0.51
NCAPD3-214ENST00000534548 TUBB4AP04350 444 aa11.9□□□□□ -0.51
NCAPD3-214ENST00000534548 MICALCLQ6ZW33 695 aa11.9□□□□□ -0.51
NCAPD3-214ENST00000534548 INTS4Q96HW7 963 aaKnown RBP11.9□□□□□ -0.51
NCAPD3-214ENST00000534548 CCDC91Q7Z6B0 441 aa11.89□□□□□ -0.51
NCAPD3-214ENST00000534548 TICAM2Q86XR7 235 aa11.89□□□□□ -0.51
NCAPD3-214ENST00000534548 SIL1Q9H173 461 aa11.89□□□□□ -0.51
NCAPD3-214ENST00000534548 SPG7Q9UQ90 795 aa11.89□□□□□ -0.51
NCAPD3-214ENST00000534548 INO80Q9ULG1 1556 aaPredicted RBP11.89□□□□□ -0.51
NCAPD3-214ENST00000534548 AACSQ86V21 672 aa11.89□□□□□ -0.51
NCAPD3-214ENST00000534548 ESYT1Q9BSJ8 1104 aa11.89□□□□□ -0.51
NCAPD3-214ENST00000534548 RAI14Q9P0K7 980 aa11.89□□□□□ -0.51
NCAPD3-214ENST00000534548 MARCH6O60337 910 aa11.88□□□□□ -0.51
NCAPD3-214ENST00000534548 KRT24Q2M2I5 525 aa11.88□□□□□ -0.51
NCAPD3-214ENST00000534548 CYB5RLQ6IPT4 315 aa11.88□□□□□ -0.51
NCAPD3-214ENST00000534548 MBIPQ9NS73 344 aa11.88□□□□□ -0.51
NCAPD3-214ENST00000534548 MAGEC2Q9UBF1 373 aaPredicted RBP11.88□□□□□ -0.51
NCAPD3-214ENST00000534548 IQSEC2Q5JU85 1478 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms