RNA–Protein interactions for RNA: ENST00000534532.6

NCAPD3-213, Transcript of non-SMC condensin II complex subunit D3, human

TSL 2

Gene NCAPD3, Length 5,539 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAPD3-213	ENST00000534532	CDCA7	Q9BWT1	371 aa	Predicted RBP	18.36	■□□□□ 0.53
NCAPD3-213	ENST00000534532	ZMYM3	Q14202	1370 aa		18.36	■□□□□ 0.53
NCAPD3-213	ENST00000534532	BAG4	O95429	457 aa	Known RBP	18.36	■□□□□ 0.53
NCAPD3-213	ENST00000534532	PPP4R3B	Q5MIZ7	849 aa		18.36	■□□□□ 0.53
NCAPD3-213	ENST00000534532	XAGE3	Q8WTP9	111 aa		18.36	■□□□□ 0.53
NCAPD3-213	ENST00000534532	FAM83G	A6ND36	823 aa		18.35	■□□□□ 0.53
NCAPD3-213	ENST00000534532	GOLGA8A	A7E2F4	631 aa		18.35	■□□□□ 0.53
NCAPD3-213	ENST00000534532	GOLGA8B	A8MQT2	603 aa		18.35	■□□□□ 0.53
NCAPD3-213	ENST00000534532	JDP2	Q8WYK2	163 aa		18.35	■□□□□ 0.53
NCAPD3-213	ENST00000534532	UTP14A	Q9BVJ6	771 aa	Known RBP	18.35	■□□□□ 0.53
NCAPD3-213	ENST00000534532	SNRK	Q9NRH2	765 aa		18.35	■□□□□ 0.53
NCAPD3-213	ENST00000534532	SH2B1	Q9NRF2	756 aa	Predicted RBP	18.35	■□□□□ 0.53
NCAPD3-213	ENST00000534532	TBX22	Q9Y458	520 aa		18.35	■□□□□ 0.53
NCAPD3-213	ENST00000534532	NLRP5	P59047	1200 aa		18.35	■□□□□ 0.53
NCAPD3-213	ENST00000534532	C16orf71	Q8IYS4	520 aa	Predicted RBP	18.35	■□□□□ 0.53
NCAPD3-213	ENST00000534532	C8orf76	Q96K31	380 aa		18.35	■□□□□ 0.53
NCAPD3-213	ENST00000534532	SSRP1	Q08945	709 aa	Known RBP	18.34	■□□□□ 0.53
NCAPD3-213	ENST00000534532	KAT14	Q9H8E8	782 aa		18.34	■□□□□ 0.53
NCAPD3-213	ENST00000534532	RPRD2	Q5VT52	1461 aa	Known RBP	18.34	■□□□□ 0.53
NCAPD3-213	ENST00000534532	TRAF1	Q13077	416 aa		18.34	■□□□□ 0.53
NCAPD3-213	ENST00000534532	COPS6	Q7L5N1	327 aa		18.34	■□□□□ 0.53
NCAPD3-213	ENST00000534532	SIRT1	Q96EB6	747 aa		18.34	■□□□□ 0.53
NCAPD3-213	ENST00000534532	HMGN5	P82970	282 aa	Known RBP	18.34	■□□□□ 0.53
NCAPD3-213	ENST00000534532	CCDC82	Q8N4S0	544 aa		18.34	■□□□□ 0.53
NCAPD3-213	ENST00000534532	SLC39A6	Q13433	755 aa		18.33	■□□□□ 0.53
NCAPD3-213	ENST00000534532	PATL2	C9JE40	543 aa	Known RBP	18.33	■□□□□ 0.53
NCAPD3-213	ENST00000534532	KIF20A	O95235	890 aa		18.33	■□□□□ 0.52
NCAPD3-213	ENST00000534532	DZIP3	Q86Y13	1208 aa	Known RBP	18.33	■□□□□ 0.52
NCAPD3-213	ENST00000534532	GC	P02774	474 aa		18.33	■□□□□ 0.52
NCAPD3-213	ENST00000534532	ANXA1	P04083	346 aa		18.33	■□□□□ 0.52
NCAPD3-213	ENST00000534532	KCNA6	P17658	529 aa		18.33	■□□□□ 0.52
NCAPD3-213	ENST00000534532	ZNF804A	Q7Z570	1209 aa		18.33	■□□□□ 0.52
NCAPD3-213	ENST00000534532	CCDC83	Q8IWF9	413 aa		18.33	■□□□□ 0.52
NCAPD3-213	ENST00000534532	ZC3H12C	Q9C0D7	883 aa	Known RBP	18.33	■□□□□ 0.52
NCAPD3-213	ENST00000534532	NUP62CL	Q9H1M0	184 aa		18.33	■□□□□ 0.52
NCAPD3-213	ENST00000534532	MFSD6	Q6ZSS7	791 aa		18.32	■□□□□ 0.52
NCAPD3-213	ENST00000534532	UHRF1BP1	Q6BDS2	1440 aa		18.32	■□□□□ 0.52
NCAPD3-213	ENST00000534532	SMTNL1	A8MU46	457 aa		18.32	■□□□□ 0.52
NCAPD3-213	ENST00000534532	EIF5	P55010	431 aa	Known RBP	18.32	■□□□□ 0.52
NCAPD3-213	ENST00000534532	CIZ1	Q9ULV3	898 aa	Predicted RBP	18.32	■□□□□ 0.52
NCAPD3-213	ENST00000534532	TSG101	Q99816	390 aa		18.32	■□□□□ 0.52
NCAPD3-213	ENST00000534532	STK32B	Q9NY57	414 aa		18.32	■□□□□ 0.52
NCAPD3-213	ENST00000534532	CHPF2	Q9P2E5	772 aa		18.31	■□□□□ 0.52
NCAPD3-213	ENST00000534532	FLT4	P35916	1363 aa		18.31	■□□□□ 0.52
NCAPD3-213	ENST00000534532	CCDC178	Q5BJE1	867 aa		18.31	■□□□□ 0.52
NCAPD3-213	ENST00000534532	FAM43A	Q8N2R8	423 aa		18.31	■□□□□ 0.52
NCAPD3-213	ENST00000534532	ALDH1L1	O75891	902 aa		18.31	■□□□□ 0.52
NCAPD3-213	ENST00000534532	ATP2B3	Q16720	1220 aa		18.31	■□□□□ 0.52
NCAPD3-213	ENST00000534532	DCAF5	Q96JK2	942 aa		18.31	■□□□□ 0.52
NCAPD3-213	ENST00000534532	UPF3B	Q9BZI7	483 aa	Known RBP	18.31	■□□□□ 0.52
NCAPD3-213	ENST00000534532	TRIM27	P14373	513 aa		18.3	■□□□□ 0.52
NCAPD3-213	ENST00000534532	CCDC181	Q5TID7	509 aa		18.3	■□□□□ 0.52
NCAPD3-213	ENST00000534532	EYA3	Q99504	573 aa		18.3	■□□□□ 0.52
NCAPD3-213	ENST00000534532	BTG4	Q9NY30	223 aa		18.3	■□□□□ 0.52
NCAPD3-213	ENST00000534532	SYCP2	Q9BX26	1530 aa		18.3	■□□□□ 0.52
NCAPD3-213	ENST00000534532	TMEM67	Q5HYA8	995 aa		18.3	■□□□□ 0.52
NCAPD3-213	ENST00000534532	DISP3	Q9P2K9	1392 aa		18.29	■□□□□ 0.52
NCAPD3-213	ENST00000534532	ZFY	P08048	801 aa	Predicted RBP	18.29	■□□□□ 0.52
NCAPD3-213	ENST00000534532	JARID2	Q92833	1246 aa	Predicted RBP	18.29	■□□□□ 0.52
NCAPD3-213	ENST00000534532	UBA5	Q9GZZ9	404 aa		18.29	■□□□□ 0.52
NCAPD3-213	ENST00000534532	TRAPPC8	Q9Y2L5	1435 aa		18.29	■□□□□ 0.52
NCAPD3-213	ENST00000534532	PCDH11X	Q9BZA7	1347 aa		18.29	■□□□□ 0.52
NCAPD3-213	ENST00000534532	PCDH11Y	Q9BZA8	1340 aa		18.29	■□□□□ 0.52
NCAPD3-213	ENST00000534532	C11orf95	C9JLR9	678 aa	Predicted RBP	18.29	■□□□□ 0.52
NCAPD3-213	ENST00000534532	FBLN1	P23142	703 aa		18.29	■□□□□ 0.52
NCAPD3-213	ENST00000534532	BACH2	Q9BYV9	841 aa		18.29	■□□□□ 0.52
NCAPD3-213	ENST00000534532	VAT1L	Q9HCJ6	419 aa		18.29	■□□□□ 0.52
NCAPD3-213	ENST00000534532	SPDYE4	A6NLX3	237 aa		18.29	■□□□□ 0.52
NCAPD3-213	ENST00000534532	CETN2	P41208	172 aa		18.29	■□□□□ 0.52
NCAPD3-213	ENST00000534532	GRM1	Q13255	1194 aa		18.29	■□□□□ 0.52
NCAPD3-213	ENST00000534532	KSR2	Q6VAB6	950 aa		18.29	■□□□□ 0.52
NCAPD3-213	ENST00000534532	TRPM2	O94759	1503 aa		18.28	■□□□□ 0.52
NCAPD3-213	ENST00000534532	CCDC150	Q8NCX0	1101 aa		18.28	■□□□□ 0.52
NCAPD3-213	ENST00000534532	PUS7	Q96PZ0	661 aa	Known RBP	18.28	■□□□□ 0.52
NCAPD3-213	ENST00000534532	NEFH	P12036	1026 aa		18.28	■□□□□ 0.52
NCAPD3-213	ENST00000534532	EIF4A2	Q14240	407 aa	Known RBP	18.28	■□□□□ 0.52
NCAPD3-213	ENST00000534532	CYP7A1	P22680	504 aa		18.28	■□□□□ 0.52
NCAPD3-213	ENST00000534532	TRAPPC3L	Q5T215	181 aa		18.28	■□□□□ 0.52
NCAPD3-213	ENST00000534532	FERMT3	Q86UX7	667 aa		18.28	■□□□□ 0.52
NCAPD3-213	ENST00000534532		F8W031	263 aa	Predicted RBP	18.27	■□□□□ 0.52
NCAPD3-213	ENST00000534532	FGFR1OP	O95684	399 aa	Known RBP	18.27	■□□□□ 0.52
NCAPD3-213	ENST00000534532	ZNF397	Q8NF99	534 aa	Predicted RBP	18.27	■□□□□ 0.52
NCAPD3-213	ENST00000534532	IL15	P40933	162 aa	Predicted RBP	18.27	■□□□□ 0.52
NCAPD3-213	ENST00000534532	NFATC2IP	Q8NCF5	419 aa		18.27	■□□□□ 0.52
NCAPD3-213	ENST00000534532	NCOA7	Q8NI08	942 aa		18.27	■□□□□ 0.52
NCAPD3-213	ENST00000534532	SCAND2P	Q9GZW5	306 aa	Predicted RBP	18.27	■□□□□ 0.52
NCAPD3-213	ENST00000534532	IARS	P41252	1262 aa	Known RBP	18.27	■□□□□ 0.51
NCAPD3-213	ENST00000534532	STX8	Q9UNK0	236 aa		18.27	■□□□□ 0.51
NCAPD3-213	ENST00000534532	LMOD1	P29536	600 aa	Predicted RBP	18.26	■□□□□ 0.51
NCAPD3-213	ENST00000534532	SSR1	P43307	286 aa	Known RBP	18.26	■□□□□ 0.51
NCAPD3-213	ENST00000534532	LMBR1L	Q6UX01	489 aa		18.26	■□□□□ 0.51
NCAPD3-213	ENST00000534532	SPC24	Q8NBT2	197 aa		18.26	■□□□□ 0.51
NCAPD3-213	ENST00000534532	BIVM-ERCC5	R4GMW8	1640 aa		18.26	■□□□□ 0.51
NCAPD3-213	ENST00000534532	GRM8	O00222	908 aa		18.26	■□□□□ 0.51
NCAPD3-213	ENST00000534532	NAA16	Q6N069	864 aa	Predicted RBP	18.26	■□□□□ 0.51
NCAPD3-213	ENST00000534532	TCP11L1	Q9NUJ3	509 aa		18.26	■□□□□ 0.51
NCAPD3-213	ENST00000534532	NSFL1C	Q9UNZ2	370 aa	Known RBP	18.26	■□□□□ 0.51
NCAPD3-213	ENST00000534532	RALGAPB	Q86X10	1494 aa		18.26	■□□□□ 0.51
NCAPD3-213	ENST00000534532	NUP153	P49790	1475 aa	Known RBP	18.25	■□□□□ 0.51
NCAPD3-213	ENST00000534532	ARHGAP45	Q92619	1136 aa		18.25	■□□□□ 0.51

Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms