RNA–Protein interactions for RNA: ENST00000534484.1

LMO1-204, Transcript of LIM domain only 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene LMO1, Length 770 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-204ENST00000534484 SMARCA5O60264 1052 aaPredicted RBP16.69■□□□□ 0.26
LMO1-204ENST00000534484 ADAMTS2O95450 1211 aa16.69■□□□□ 0.26
LMO1-204ENST00000534484 PIP4K2BP78356 416 aa16.69■□□□□ 0.26
LMO1-204ENST00000534484 KAZALD1Q96I82 304 aa16.69■□□□□ 0.26
LMO1-204ENST00000534484 SRGAP3O43295 1099 aa16.68■□□□□ 0.26
LMO1-204ENST00000534484 PDE1AP54750 535 aa16.68■□□□□ 0.26
LMO1-204ENST00000534484 OTUD7AQ8TE49 926 aaPredicted RBP16.68■□□□□ 0.26
LMO1-204ENST00000534484 ZNF831Q5JPB2 1677 aa16.68■□□□□ 0.26
LMO1-204ENST00000534484 RREB1Q92766 1687 aa16.67■□□□□ 0.26
LMO1-204ENST00000534484 CDC45O75419 566 aa16.67■□□□□ 0.26
LMO1-204ENST00000534484 SUCLG2Q96I99 432 aa16.67■□□□□ 0.26
LMO1-204ENST00000534484 MYD88Q99836 296 aa16.67■□□□□ 0.26
LMO1-204ENST00000534484 ASAP1Q9ULH1 1129 aa16.67■□□□□ 0.26
LMO1-204ENST00000534484 PTCD1O75127 700 aaKnown RBP16.66■□□□□ 0.26
LMO1-204ENST00000534484 TBC1D9Q6ZT07 1266 aa16.66■□□□□ 0.26
LMO1-204ENST00000534484 CERKQ8TCT0 537 aa16.66■□□□□ 0.26
LMO1-204ENST00000534484 KIF1BPQ96EK5 621 aa16.66■□□□□ 0.26
LMO1-204ENST00000534484 BCL9LQ86UU0 1499 aa16.66■□□□□ 0.26
LMO1-204ENST00000534484 SPATA31A6Q5VVP1 1343 aa16.66■□□□□ 0.26
LMO1-204ENST00000534484 SURF6O75683 361 aaKnown RBP16.65■□□□□ 0.26
LMO1-204ENST00000534484 A1BGP04217 495 aa16.65■□□□□ 0.26
LMO1-204ENST00000534484 RBM25P49756 843 aaKnown RBP16.65■□□□□ 0.26
LMO1-204ENST00000534484 CASP7P55210 303 aa16.65■□□□□ 0.26
LMO1-204ENST00000534484 DDB1Q16531 1140 aa16.65■□□□□ 0.26
LMO1-204ENST00000534484 UNC5CLQ8IV45 518 aa16.65■□□□□ 0.26
LMO1-204ENST00000534484 RHPN1Q8TCX5 695 aa16.65■□□□□ 0.26
LMO1-204ENST00000534484 USP42Q9H9J4 1324 aaKnown RBP16.65■□□□□ 0.26
LMO1-204ENST00000534484 NUTM2BA6NNL0 878 aaPredicted RBP16.64■□□□□ 0.25
LMO1-204ENST00000534484 NUTM2EB1AL46 878 aaPredicted RBP16.64■□□□□ 0.25
LMO1-204ENST00000534484 VPS72Q15906 364 aa16.64■□□□□ 0.25
LMO1-204ENST00000534484 RABL6Q3YEC7 729 aaPredicted RBP16.64■□□□□ 0.25
LMO1-204ENST00000534484 NUTM2AQ8IVF1 878 aaPredicted RBP16.64■□□□□ 0.25
LMO1-204ENST00000534484 FNBP4Q8N3X1 1017 aaPredicted RBP16.64■□□□□ 0.25
LMO1-204ENST00000534484 C22orf23Q9BZE7 217 aa16.64■□□□□ 0.25
LMO1-204ENST00000534484 ANKRD36CQ5JPF3 1778 aa16.64■□□□□ 0.25
LMO1-204ENST00000534484 SDSP20132 328 aa16.63■□□□□ 0.25
LMO1-204ENST00000534484 MX1P20591 662 aa16.63■□□□□ 0.25
LMO1-204ENST00000534484 PIP4K2AP48426 406 aaPredicted RBP16.63■□□□□ 0.25
LMO1-204ENST00000534484 TTLL7Q6ZT98 887 aa16.63■□□□□ 0.25
LMO1-204ENST00000534484 ERC1Q8IUD2 1116 aa16.63■□□□□ 0.25
LMO1-204ENST00000534484 DNAJC10Q8IXB1 793 aa16.63■□□□□ 0.25
LMO1-204ENST00000534484 BICC1Q9H694 974 aaKnown RBP16.63■□□□□ 0.25
LMO1-204ENST00000534484 THSD7AQ9UPZ6 1657 aa16.62■□□□□ 0.25
LMO1-204ENST00000534484 H7C1W4 665 aa16.62■□□□□ 0.25
LMO1-204ENST00000534484 APBB1O00213 710 aa16.62■□□□□ 0.25
LMO1-204ENST00000534484 STARD3NLO95772 234 aa16.62■□□□□ 0.25
LMO1-204ENST00000534484 TRIM28Q13263 835 aaKnown RBP16.62■□□□□ 0.25
LMO1-204ENST00000534484 MARCH10Q8NA82 808 aaPredicted RBP16.62■□□□□ 0.25
LMO1-204ENST00000534484 SLC4A9Q96Q91 983 aa16.62■□□□□ 0.25
LMO1-204ENST00000534484 MFAP1P55081 439 aaKnown RBP16.61■□□□□ 0.25
LMO1-204ENST00000534484 CCDC191Q8NCU4 936 aa16.61■□□□□ 0.25
LMO1-204ENST00000534484 ISCA1Q9BUE6 129 aa16.61■□□□□ 0.25
LMO1-204ENST00000534484 AK9Q5TCS8 1911 aa16.6■□□□□ 0.25
LMO1-204ENST00000534484 CYP19A1P11511 503 aaPredicted RBP16.6■□□□□ 0.25
LMO1-204ENST00000534484 COPRSQ9NQ92 184 aa16.6■□□□□ 0.25
LMO1-204ENST00000534484 PRIM1P49642 420 aaKnown RBP16.59■□□□□ 0.25
LMO1-204ENST00000534484 ERICH6Q7L0X2 663 aa16.59■□□□□ 0.25
LMO1-204ENST00000534484 CWC25Q9NXE8 425 aaPredicted RBP16.59■□□□□ 0.25
LMO1-204ENST00000534484 A0A087WZG4 1122 aa16.58■□□□□ 0.24
LMO1-204ENST00000534484 RFX5P48382 616 aaPredicted RBP16.58■□□□□ 0.24
LMO1-204ENST00000534484 TCIRG1Q13488 830 aa16.58■□□□□ 0.24
LMO1-204ENST00000534484 EPHA10Q5JZY3 1008 aa16.58■□□□□ 0.24
LMO1-204ENST00000534484 TTC41PQ6P2S7 1318 aa16.58■□□□□ 0.24
LMO1-204ENST00000534484 COL5A3P25940 1745 aaPredicted RBP16.58■□□□□ 0.24
LMO1-204ENST00000534484 NUP98P52948 1817 aa16.58■□□□□ 0.24
LMO1-204ENST00000534484 KAT6BQ8WYB5 2073 aa16.58■□□□□ 0.24
LMO1-204ENST00000534484 BECN1Q14457 450 aa16.57■□□□□ 0.24
LMO1-204ENST00000534484 PI4K2BQ8TCG2 481 aa16.57■□□□□ 0.24
LMO1-204ENST00000534484 RBM42Q9BTD8 480 aaKnown RBP16.57■□□□□ 0.24
LMO1-204ENST00000534484 IL1RAPL2Q9NP60 686 aa16.57■□□□□ 0.24
LMO1-204ENST00000534484 MAP3K15Q6ZN16 1313 aa16.56■□□□□ 0.24
LMO1-204ENST00000534484 ATP5J2-PTCD1G3V325 749 aa16.56■□□□□ 0.24
LMO1-204ENST00000534484 SASH1O94885 1247 aa16.56■□□□□ 0.24
LMO1-204ENST00000534484 IL6STP40189 918 aaPredicted RBP16.56■□□□□ 0.24
LMO1-204ENST00000534484 FOXO4P98177 505 aa16.56■□□□□ 0.24
LMO1-204ENST00000534484 CASC1Q6TDU7 716 aa16.56■□□□□ 0.24
LMO1-204ENST00000534484 UBE3BQ7Z3V4 1068 aa16.56■□□□□ 0.24
LMO1-204ENST00000534484 NGLY1Q96IV0 654 aa16.56■□□□□ 0.24
LMO1-204ENST00000534484 ANP32EQ9BTT0 268 aa16.56■□□□□ 0.24
LMO1-204ENST00000534484 GIGYF2Q6Y7W6 1299 aaKnown RBP16.55■□□□□ 0.24
LMO1-204ENST00000534484 KIF6Q6ZMV9 814 aa16.55■□□□□ 0.24
LMO1-204ENST00000534484 CLASRPQ8N2M8 674 aaKnown RBP16.55■□□□□ 0.24
LMO1-204ENST00000534484 PA2G4Q9UQ80 394 aaKnown RBP16.55■□□□□ 0.24
LMO1-204ENST00000534484 ERVV-1B6SEH8 477 aa16.54■□□□□ 0.24
LMO1-204ENST00000534484 EPB41L2O43491 1005 aaKnown RBP16.54■□□□□ 0.24
LMO1-204ENST00000534484 PTPN12Q05209 780 aaKnown RBP16.54■□□□□ 0.24
LMO1-204ENST00000534484 G3BP1Q13283 466 aaKnown RBP eCLIP16.54■□□□□ 0.24
LMO1-204ENST00000534484 HSP90AB3PQ58FF7 597 aa16.54■□□□□ 0.24
LMO1-204ENST00000534484 SMARCC1Q92922 1105 aaPredicted RBP16.54■□□□□ 0.24
LMO1-204ENST00000534484 PLA2G12BQ9BX93 195 aa16.54■□□□□ 0.24
LMO1-204ENST00000534484 ZBTB3Q9H5J0 574 aa16.54■□□□□ 0.24
LMO1-204ENST00000534484 NHSQ6T4R5 1651 aa16.53■□□□□ 0.24
LMO1-204ENST00000534484 OS9Q13438 667 aaPredicted RBP16.53■□□□□ 0.24
LMO1-204ENST00000534484 SNX21Q969T3 373 aa16.53■□□□□ 0.24
LMO1-204ENST00000534484 C8orf37Q96NL8 207 aa16.53■□□□□ 0.24
LMO1-204ENST00000534484 KIF2CQ99661 725 aa16.53■□□□□ 0.24
LMO1-204ENST00000534484 USP26Q9BXU7 913 aa16.53■□□□□ 0.24
LMO1-204ENST00000534484 MYH14Q7Z406 1995 aaKnown RBP16.53■□□□□ 0.24
LMO1-204ENST00000534484 GLRX3O76003 335 aaKnown RBP16.52■□□□□ 0.24
LMO1-204ENST00000534484 PCCAP05165 728 aaPredicted RBP16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms