RNA–Protein interactions for RNA: ENST00000534290.1

NCAPD3-212, Transcript of non-SMC condensin II complex subunit D3, humanhuman

TSL 2

Gene NCAPD3, Length 352 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-212ENST00000534290 RNF181Q9P0P0 153 aa13.58□□□□□ -0.24
NCAPD3-212ENST00000534290 ZBTB47Q9UFB7 747 aaPredicted RBP13.58□□□□□ -0.24
NCAPD3-212ENST00000534290 TRIM35Q9UPQ4 493 aa13.58□□□□□ -0.24
NCAPD3-212ENST00000534290 MYH14Q7Z406 1995 aaKnown RBP13.58□□□□□ -0.24
NCAPD3-212ENST00000534290 COL5A3P25940 1745 aaPredicted RBP13.57□□□□□ -0.24
NCAPD3-212ENST00000534290 HTRA3P83110 453 aa13.57□□□□□ -0.24
NCAPD3-212ENST00000534290 FSTL1Q12841 308 aa13.57□□□□□ -0.24
NCAPD3-212ENST00000534290 SMC4Q9NTJ3 1288 aa13.57□□□□□ -0.24
NCAPD3-212ENST00000534290 IFT57Q9NWB7 429 aa13.57□□□□□ -0.24
NCAPD3-212ENST00000534290 DDX19BQ9UMR2 479 aa13.57□□□□□ -0.24
NCAPD3-212ENST00000534290 CYP19A1P11511 503 aaPredicted RBP13.56□□□□□ -0.24
NCAPD3-212ENST00000534290 BRPF1P55201 1214 aaPredicted RBP13.56□□□□□ -0.24
NCAPD3-212ENST00000534290 EXOSC9Q06265 439 aaKnown RBP13.56□□□□□ -0.24
NCAPD3-212ENST00000534290 SLC52A2Q9HAB3 445 aa13.56□□□□□ -0.24
NCAPD3-212ENST00000534290 SLC39A6Q13433 755 aa13.55□□□□□ -0.24
NCAPD3-212ENST00000534290 FAM161AQ3B820 660 aa13.55□□□□□ -0.24
NCAPD3-212ENST00000534290 COG6Q9Y2V7 657 aa13.55□□□□□ -0.24
NCAPD3-212ENST00000534290 MVPQ14764 893 aaKnown RBP13.54□□□□□ -0.24
NCAPD3-212ENST00000534290 NFIXQ14938 502 aa13.54□□□□□ -0.24
NCAPD3-212ENST00000534290 ARHGAP45Q92619 1136 aa13.54□□□□□ -0.24
NCAPD3-212ENST00000534290 KLRG1Q96E93 195 aa13.54□□□□□ -0.24
NCAPD3-212ENST00000534290 DAXXQ9UER7 740 aaPredicted RBP13.54□□□□□ -0.24
NCAPD3-212ENST00000534290 NARFQ9UHQ1 456 aa13.54□□□□□ -0.24
NCAPD3-212ENST00000534290 NOP58Q9Y2X3 529 aaKnown RBP13.54□□□□□ -0.24
NCAPD3-212ENST00000534290 SOS1Q07889 1333 aaPredicted RBP13.54□□□□□ -0.24
NCAPD3-212ENST00000534290 KCPQ6ZWJ8 1503 aa13.54□□□□□ -0.24
NCAPD3-212ENST00000534290 RNMTO43148 476 aaKnown RBP13.53□□□□□ -0.24
NCAPD3-212ENST00000534290 HMOX1P09601 288 aa13.53□□□□□ -0.24
NCAPD3-212ENST00000534290 ATF7IPQ6VMQ6 1270 aa13.53□□□□□ -0.24
NCAPD3-212ENST00000534290 BRCA1P38398 1863 aaKnown RBP13.53□□□□□ -0.24
NCAPD3-212ENST00000534290 SERPINB2P05120 415 aa13.52□□□□□ -0.25
NCAPD3-212ENST00000534290 LMNB1P20700 586 aa13.52□□□□□ -0.25
NCAPD3-212ENST00000534290 PANK1Q8TE04 598 aa13.52□□□□□ -0.25
NCAPD3-212ENST00000534290 EIF5BO60841 1220 aaKnown RBP13.51□□□□□ -0.25
NCAPD3-212ENST00000534290 RASSF7Q02833 373 aa13.51□□□□□ -0.25
NCAPD3-212ENST00000534290 MTHFSDQ2M296 383 aaKnown RBP13.51□□□□□ -0.25
NCAPD3-212ENST00000534290 TTLL6Q8N841 843 aa13.51□□□□□ -0.25
NCAPD3-212ENST00000534290 JMYQ8N9B5 988 aa13.51□□□□□ -0.25
NCAPD3-212ENST00000534290 SMC1BQ8NDV3 1235 aa13.51□□□□□ -0.25
NCAPD3-212ENST00000534290 CFAP44Q96MT7 982 aa13.51□□□□□ -0.25
NCAPD3-212ENST00000534290 BCL2L12Q9HB09 334 aa13.51□□□□□ -0.25
NCAPD3-212ENST00000534290 ZBTB1Q9Y2K1 713 aa13.51□□□□□ -0.25
NCAPD3-212ENST00000534290 ARFGEF1Q9Y6D6 1849 aa13.5□□□□□ -0.25
NCAPD3-212ENST00000534290 H0YIN7 160 aa13.5□□□□□ -0.25
NCAPD3-212ENST00000534290 C2CD5Q86YS7 1000 aa13.5□□□□□ -0.25
NCAPD3-212ENST00000534290 VSIG10Q8N0Z9 540 aa13.5□□□□□ -0.25
NCAPD3-212ENST00000534290 CHMP4AQ9BY43 222 aa13.5□□□□□ -0.25
NCAPD3-212ENST00000534290 TJP1Q07157 1748 aa13.5□□□□□ -0.25
NCAPD3-212ENST00000534290 COL15A1P39059 1388 aa13.49□□□□□ -0.25
NCAPD3-212ENST00000534290 ZC3H4Q9UPT8 1303 aaKnown RBP13.49□□□□□ -0.25
NCAPD3-212ENST00000534290 GLTPD2A6NH11 291 aa13.49□□□□□ -0.25
NCAPD3-212ENST00000534290 STARD3NLO95772 234 aa13.49□□□□□ -0.25
NCAPD3-212ENST00000534290 VEGFAP15692 232 aaPredicted RBP13.49□□□□□ -0.25
NCAPD3-212ENST00000534290 PRELPP51888 382 aa13.49□□□□□ -0.25
NCAPD3-212ENST00000534290 COL13A1Q5TAT6 717 aaPredicted RBP13.49□□□□□ -0.25
NCAPD3-212ENST00000534290 BICDL1Q6ZP65 573 aa13.49□□□□□ -0.25
NCAPD3-212ENST00000534290 TSR2Q969E8 191 aaKnown RBP13.49□□□□□ -0.25
NCAPD3-212ENST00000534290 API5Q9BZZ5 524 aaKnown RBP13.49□□□□□ -0.25
NCAPD3-212ENST00000534290 UPF2Q9HAU5 1272 aaKnown RBP13.49□□□□□ -0.25
NCAPD3-212ENST00000534290 LAS1LQ9Y4W2 734 aaKnown RBP13.49□□□□□ -0.25
NCAPD3-212ENST00000534290 HTATSF1O43719 755 aaKnown RBP13.48□□□□□ -0.25
NCAPD3-212ENST00000534290 SSH1Q8WYL5 1049 aa13.48□□□□□ -0.25
NCAPD3-212ENST00000534290 RTF1Q92541 710 aaKnown RBP13.48□□□□□ -0.25
NCAPD3-212ENST00000534290 NOB1Q9ULX3 412 aaKnown RBP13.48□□□□□ -0.25
NCAPD3-212ENST00000534290 SCN11AQ9UI33 1791 aa13.48□□□□□ -0.25
NCAPD3-212ENST00000534290 ADAMTS7Q9UKP4 1686 aa13.47□□□□□ -0.25
NCAPD3-212ENST00000534290 A0A087WZG4 1122 aa13.47□□□□□ -0.25
NCAPD3-212ENST00000534290 EIF5P55010 431 aaKnown RBP13.47□□□□□ -0.25
NCAPD3-212ENST00000534290 TTC5Q8N0Z6 440 aa13.47□□□□□ -0.25
NCAPD3-212ENST00000534290 GAS2L2Q8NHY3 880 aa13.47□□□□□ -0.25
NCAPD3-212ENST00000534290 WDR90Q96KV7 1748 aa13.47□□□□□ -0.25
NCAPD3-212ENST00000534290 ZNF853P0CG23 659 aa13.46□□□□□ -0.25
NCAPD3-212ENST00000534290 HDAC1Q13547 482 aaPredicted RBP13.46□□□□□ -0.25
NCAPD3-212ENST00000534290 ITPRIPQ8IWB1 547 aa13.46□□□□□ -0.25
NCAPD3-212ENST00000534290 PHACTR3Q96KR7 559 aa13.46□□□□□ -0.25
NCAPD3-212ENST00000534290 SBF1O95248 1867 aa13.45□□□□□ -0.26
NCAPD3-212ENST00000534290 NFKBIEO00221 500 aa13.45□□□□□ -0.26
NCAPD3-212ENST00000534290 RGS3P49796 1198 aa13.45□□□□□ -0.26
NCAPD3-212ENST00000534290 TBC1D9BQ66K14 1250 aa13.45□□□□□ -0.26
NCAPD3-212ENST00000534290 DPY19L2Q6NUT2 758 aa13.45□□□□□ -0.26
NCAPD3-212ENST00000534290 ZNF622Q969S3 477 aaKnown RBP eCLIP13.45□□□□□ -0.26
NCAPD3-212ENST00000534290 ZNF496Q96IT1 587 aaPredicted RBP13.45□□□□□ -0.26
NCAPD3-212ENST00000534290 BRIP1Q9BX63 1249 aa13.45□□□□□ -0.26
NCAPD3-212ENST00000534290 BCL2L13Q9BXK5 485 aa13.45□□□□□ -0.26
NCAPD3-212ENST00000534290 TEX13AQ9BXU3 409 aaPredicted RBP13.45□□□□□ -0.26
NCAPD3-212ENST00000534290 TBC1D2BQ9UPU7 963 aa13.45□□□□□ -0.26
NCAPD3-212ENST00000534290 MRC1P22897 1456 aa13.44□□□□□ -0.26
NCAPD3-212ENST00000534290 C21orf2O43822 256 aa13.44□□□□□ -0.26
NCAPD3-212ENST00000534290 VAMP4O75379 141 aa13.44□□□□□ -0.26
NCAPD3-212ENST00000534290 IGHDP01880 384 aa13.44□□□□□ -0.26
NCAPD3-212ENST00000534290 TRIM27P14373 513 aa13.44□□□□□ -0.26
NCAPD3-212ENST00000534290 PDE6BP35913 854 aa13.44□□□□□ -0.26
NCAPD3-212ENST00000534290 TWISTNBQ3B726 338 aaPredicted RBP13.44□□□□□ -0.26
NCAPD3-212ENST00000534290 ZNF790Q6PG37 636 aa13.44□□□□□ -0.26
NCAPD3-212ENST00000534290 NPM2Q86SE8 214 aaKnown RBP13.44□□□□□ -0.26
NCAPD3-212ENST00000534290 IL17REQ8NFR9 667 aa13.44□□□□□ -0.26
NCAPD3-212ENST00000534290 PDZRN3Q9UPQ7 1066 aa13.44□□□□□ -0.26
NCAPD3-212ENST00000534290 CARMIL3Q8ND23 1372 aa13.44□□□□□ -0.26
NCAPD3-212ENST00000534290 GNAT3A8MTJ3 354 aa13.43□□□□□ -0.26
NCAPD3-212ENST00000534290 POTECB2RU33 542 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms