RNA–Protein interactions for RNA: ENST00000533733.5

ATM-222, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-222ENST00000533733 GZF1Q9H116 711 aaPredicted RBP14.5□□□□□ -0.09
ATM-222ENST00000533733 ECHDC1Q9NTX5 307 aa14.5□□□□□ -0.09
ATM-222ENST00000533733 ERBB4Q15303 1308 aa14.5□□□□□ -0.09
ATM-222ENST00000533733 NUTM1Q86Y26 1132 aa14.49□□□□□ -0.09
ATM-222ENST00000533733 DDX49Q9Y6V7 483 aaKnown RBP14.49□□□□□ -0.09
ATM-222ENST00000533733 ARFGEF2Q9Y6D5 1785 aa14.49□□□□□ -0.09
ATM-222ENST00000533733 KDM4FA0A1W2PPD8 638 aa14.49□□□□□ -0.09
ATM-222ENST00000533733 TSHZ3Q63HK5 1081 aa14.49□□□□□ -0.09
ATM-222ENST00000533733 NLRP2Q9NX02 1062 aa14.49□□□□□ -0.09
ATM-222ENST00000533733 MEGF6O75095 1541 aa14.49□□□□□ -0.09
ATM-222ENST00000533733 IFIT2P09913 472 aaKnown RBP14.48□□□□□ -0.09
ATM-222ENST00000533733 G3BP1Q13283 466 aaKnown RBP eCLIP14.48□□□□□ -0.09
ATM-222ENST00000533733 EVI5LQ96CN4 794 aa14.48□□□□□ -0.09
ATM-222ENST00000533733 XIRP1Q702N8 1843 aaKnown RBP14.47□□□□□ -0.09
ATM-222ENST00000533733 PLEKHG5O94827 1062 aa14.47□□□□□ -0.09
ATM-222ENST00000533733 SNRPA1P09661 255 aaKnown RBP14.47□□□□□ -0.09
ATM-222ENST00000533733 PDIA4P13667 645 aaKnown RBP14.47□□□□□ -0.09
ATM-222ENST00000533733 ZC3H6P61129 1189 aaKnown RBP14.47□□□□□ -0.09
ATM-222ENST00000533733 RIC3Q7Z5B4 369 aa14.47□□□□□ -0.09
ATM-222ENST00000533733 UNC5CLQ8IV45 518 aa14.47□□□□□ -0.09
ATM-222ENST00000533733 TTC5Q8N0Z6 440 aa14.47□□□□□ -0.09
ATM-222ENST00000533733 UBR2Q8IWV8 1755 aa14.47□□□□□ -0.09
ATM-222ENST00000533733 SPATA31A3Q5VYP0 1347 aa14.47□□□□□ -0.09
ATM-222ENST00000533733 MBD3O95983 291 aa14.46□□□□□ -0.09
ATM-222ENST00000533733 ANXA1P04083 346 aa14.46□□□□□ -0.09
ATM-222ENST00000533733 PDIA6Q15084 440 aa14.46□□□□□ -0.09
ATM-222ENST00000533733 FMNL2Q96PY5 1086 aa14.46□□□□□ -0.09
ATM-222ENST00000533733 METTL22Q9BUU2 404 aaPredicted RBP14.46□□□□□ -0.09
ATM-222ENST00000533733 DIAPH3Q9NSV4 1193 aa14.46□□□□□ -0.09
ATM-222ENST00000533733 BRD1O95696 1058 aa14.46□□□□□ -0.1
ATM-222ENST00000533733 CSB-PGBD3P0DP91 1061 aa14.46□□□□□ -0.1
ATM-222ENST00000533733 ZNF445P59923 1031 aa14.46□□□□□ -0.1
ATM-222ENST00000533733 PROSER3Q2NL68 480 aa14.46□□□□□ -0.1
ATM-222ENST00000533733 TM6SF1Q9BZW5 370 aa14.46□□□□□ -0.1
ATM-222ENST00000533733 LSG1Q9H089 658 aaKnown RBP14.46□□□□□ -0.1
ATM-222ENST00000533733 LMBRD1Q9NUN5 540 aa14.46□□□□□ -0.1
ATM-222ENST00000533733 MCTP1Q6DN14 999 aa14.45□□□□□ -0.1
ATM-222ENST00000533733 TICAM2Q86XR7 235 aa14.45□□□□□ -0.1
ATM-222ENST00000533733 KLHL34Q8N239 644 aa14.45□□□□□ -0.1
ATM-222ENST00000533733 ZGPATQ8N5A5 531 aaKnown RBP14.45□□□□□ -0.1
ATM-222ENST00000533733 PALD1Q9ULE6 856 aa14.45□□□□□ -0.1
ATM-222ENST00000533733 RFX7Q2KHR2 1363 aa14.45□□□□□ -0.1
ATM-222ENST00000533733 PAPPAQ13219 1627 aa14.45□□□□□ -0.1
ATM-222ENST00000533733 NEURL1BA8MQ27 555 aa14.44□□□□□ -0.1
ATM-222ENST00000533733 CWF19L2Q2TBE0 894 aaKnown RBP14.44□□□□□ -0.1
ATM-222ENST00000533733 ANP32BQ92688 251 aaKnown RBP14.44□□□□□ -0.1
ATM-222ENST00000533733 KCNB2Q92953 911 aa14.44□□□□□ -0.1
ATM-222ENST00000533733 SUCLG2Q96I99 432 aa14.44□□□□□ -0.1
ATM-222ENST00000533733 SNRKQ9NRH2 765 aa14.44□□□□□ -0.1
ATM-222ENST00000533733 WDR33Q9C0J8 1336 aaKnown RBP14.44□□□□□ -0.1
ATM-222ENST00000533733 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.44□□□□□ -0.1
ATM-222ENST00000533733 GLI3P10071 1580 aa14.43□□□□□ -0.1
ATM-222ENST00000533733 GCKRQ14397 625 aa14.43□□□□□ -0.1
ATM-222ENST00000533733 ANKRD13DQ6ZTN6 518 aa14.43□□□□□ -0.1
ATM-222ENST00000533733 NFATC2IPQ8NCF5 419 aa14.43□□□□□ -0.1
ATM-222ENST00000533733 ZSCAN31Q96LW9 406 aaPredicted RBP14.43□□□□□ -0.1
ATM-222ENST00000533733 BICC1Q9H694 974 aaKnown RBP14.43□□□□□ -0.1
ATM-222ENST00000533733 ZDHHC9Q9Y397 364 aa14.43□□□□□ -0.1
ATM-222ENST00000533733 SNX14Q9Y5W7 946 aa14.43□□□□□ -0.1
ATM-222ENST00000533733 NUP188Q5SRE5 1749 aa14.42□□□□□ -0.1
ATM-222ENST00000533733 IGKV5-2P06315 115 aa14.42□□□□□ -0.1
ATM-222ENST00000533733 AACSQ86V21 672 aa14.42□□□□□ -0.1
ATM-222ENST00000533733 COPRSQ9NQ92 184 aa14.42□□□□□ -0.1
ATM-222ENST00000533733 ABCA3Q99758 1704 aa14.42□□□□□ -0.1
ATM-222ENST00000533733 XAGE3Q8WTP9 111 aa14.41□□□□□ -0.1
ATM-222ENST00000533733 KAZALD1Q96I82 304 aa14.41□□□□□ -0.1
ATM-222ENST00000533733 TTC14Q96N46 770 aa14.41□□□□□ -0.1
ATM-222ENST00000533733 SH2B1Q9NRF2 756 aaPredicted RBP14.41□□□□□ -0.1
ATM-222ENST00000533733 LIMCH1Q9UPQ0 1083 aa14.41□□□□□ -0.1
ATM-222ENST00000533733 PCDH11XQ9BZA7 1347 aa14.41□□□□□ -0.1
ATM-222ENST00000533733 PCDH11YQ9BZA8 1340 aa14.41□□□□□ -0.1
ATM-222ENST00000533733 PRAMEF22A3QJZ6 481 aa14.41□□□□□ -0.1
ATM-222ENST00000533733 ZKSCAN1P17029 563 aaPredicted RBP14.41□□□□□ -0.1
ATM-222ENST00000533733 CABP4P57796 275 aa14.41□□□□□ -0.1
ATM-222ENST00000533733 CCDC173Q0VFZ6 552 aa14.41□□□□□ -0.1
ATM-222ENST00000533733 AIMP1Q12904 312 aaKnown RBP14.41□□□□□ -0.1
ATM-222ENST00000533733 RABL6Q3YEC7 729 aaPredicted RBP14.41□□□□□ -0.1
ATM-222ENST00000533733 VPS53Q5VIR6 699 aa14.41□□□□□ -0.1
ATM-222ENST00000533733 CWC27Q6UX04 472 aaKnown RBP14.41□□□□□ -0.1
ATM-222ENST00000533733 COPS6Q7L5N1 327 aa14.41□□□□□ -0.1
ATM-222ENST00000533733 SYAP1Q96A49 352 aaPredicted RBP14.41□□□□□ -0.1
ATM-222ENST00000533733 ZNF496Q96IT1 587 aaPredicted RBP14.41□□□□□ -0.1
ATM-222ENST00000533733 ATP6V1DQ9Y5K8 247 aa14.41□□□□□ -0.1
ATM-222ENST00000533733 ERVV-2B6SEH9 535 aa14.4□□□□□ -0.1
ATM-222ENST00000533733 CYP27B1O15528 508 aa14.4□□□□□ -0.1
ATM-222ENST00000533733 SASH1O94885 1247 aa14.4□□□□□ -0.1
ATM-222ENST00000533733 PSMA5P28066 241 aa14.4□□□□□ -0.1
ATM-222ENST00000533733 RNF20Q5VTR2 975 aa14.4□□□□□ -0.1
ATM-222ENST00000533733 LRP10Q7Z4F1 713 aa14.4□□□□□ -0.1
ATM-222ENST00000533733 CCDC171Q6TFL3 1326 aa14.4□□□□□ -0.1
ATM-222ENST00000533733 WDR17Q8IZU2 1322 aa14.4□□□□□ -0.1
ATM-222ENST00000533733 SLC39A6Q13433 755 aa14.39□□□□□ -0.11
ATM-222ENST00000533733 PKP1Q13835 747 aa14.39□□□□□ -0.11
ATM-222ENST00000533733 PLBD2Q8NHP8 589 aa14.39□□□□□ -0.11
ATM-222ENST00000533733 MYD88Q99836 296 aa14.39□□□□□ -0.11
ATM-222ENST00000533733 SPEF2Q9C093 1822 aa14.39□□□□□ -0.11
ATM-222ENST00000533733 MAP4K4O95819 1239 aaPredicted RBP14.38□□□□□ -0.11
ATM-222ENST00000533733 NCLP19338 710 aaKnown RBP14.38□□□□□ -0.11
ATM-222ENST00000533733 UPF3BQ9BZI7 483 aaKnown RBP14.38□□□□□ -0.11
ATM-222ENST00000533733 IL25Q9H293 177 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms