RNA–Protein interactions for RNA: ENST00000533390.5

AP004608.1-202, humanhuman

TSL 1 (best) BASIC

Gene AP004608.1, Length 1,863 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004608.1-202ENST00000533390 ATG3Q9NT62 314 aa27.01■■□□□ 1.91
AP004608.1-202ENST00000533390 A1BGP04217 495 aa27■■□□□ 1.91
AP004608.1-202ENST00000533390 BARGINQ6ZT62 677 aa27■■□□□ 1.91
AP004608.1-202ENST00000533390 SURF6O75683 361 aaKnown RBP27■■□□□ 1.91
AP004608.1-202ENST00000533390 SYTL4Q96C24 671 aaPredicted RBP27■■□□□ 1.91
AP004608.1-202ENST00000533390 GCKRQ14397 625 aa26.99■■□□□ 1.91
AP004608.1-202ENST00000533390 HSP90AB4PQ58FF6 505 aa26.99■■□□□ 1.91
AP004608.1-202ENST00000533390 OTUD7AQ8TE49 926 aaPredicted RBP26.99■■□□□ 1.91
AP004608.1-202ENST00000533390 RBM42Q9BTD8 480 aaKnown RBP26.99■■□□□ 1.91
AP004608.1-202ENST00000533390 UNC5CLQ8IV45 518 aa26.98■■□□□ 1.91
AP004608.1-202ENST00000533390 MFAP1P55081 439 aaKnown RBP26.98■■□□□ 1.91
AP004608.1-202ENST00000533390 NUP188Q5SRE5 1749 aa26.98■■□□□ 1.91
AP004608.1-202ENST00000533390 GSPT1P15170 499 aaKnown RBP26.97■■□□□ 1.91
AP004608.1-202ENST00000533390 SUCLG2Q96I99 432 aa26.97■■□□□ 1.91
AP004608.1-202ENST00000533390 NGLY1Q96IV0 654 aa26.97■■□□□ 1.91
AP004608.1-202ENST00000533390 C8orf37Q96NL8 207 aa26.96■■□□□ 1.91
AP004608.1-202ENST00000533390 STARD3NLO95772 234 aa26.96■■□□□ 1.91
AP004608.1-202ENST00000533390 CERKQ8TCT0 537 aa26.96■■□□□ 1.91
AP004608.1-202ENST00000533390 TBC1D32Q96NH3 1257 aa26.96■■□□□ 1.91
AP004608.1-202ENST00000533390 OSBPL3Q9H4L5 887 aa26.96■■□□□ 1.91
AP004608.1-202ENST00000533390 CDC45O75419 566 aa26.95■■□□□ 1.9
AP004608.1-202ENST00000533390 DNAJC10Q8IXB1 793 aa26.95■■□□□ 1.9
AP004608.1-202ENST00000533390 PRIM1P49642 420 aaKnown RBP26.94■■□□□ 1.9
AP004608.1-202ENST00000533390 PDE1AP54750 535 aa26.94■■□□□ 1.9
AP004608.1-202ENST00000533390 TTLL7Q6ZT98 887 aa26.94■■□□□ 1.9
AP004608.1-202ENST00000533390 KIF1BPQ96EK5 621 aa26.94■■□□□ 1.9
AP004608.1-202ENST00000533390 SPATA31A6Q5VVP1 1343 aa26.94■■□□□ 1.9
AP004608.1-202ENST00000533390 EIF5BO60841 1220 aaKnown RBP26.93■■□□□ 1.9
AP004608.1-202ENST00000533390 BICC1Q9H694 974 aaKnown RBP26.93■■□□□ 1.9
AP004608.1-202ENST00000533390 OS9Q13438 667 aaPredicted RBP26.92■■□□□ 1.9
AP004608.1-202ENST00000533390 RHPN1Q8TCX5 695 aa26.92■■□□□ 1.9
AP004608.1-202ENST00000533390 DAXXQ9UER7 740 aaPredicted RBP26.92■■□□□ 1.9
AP004608.1-202ENST00000533390 ATP5J2-PTCD1G3V325 749 aa26.91■■□□□ 1.9
AP004608.1-202ENST00000533390 MX1P20591 662 aa26.91■■□□□ 1.9
AP004608.1-202ENST00000533390 TBC1D9Q6ZT07 1266 aa26.91■■□□□ 1.9
AP004608.1-202ENST00000533390 VPS72Q15906 364 aa26.91■■□□□ 1.9
AP004608.1-202ENST00000533390 KAZALD1Q96I82 304 aa26.91■■□□□ 1.9
AP004608.1-202ENST00000533390 C22orf23Q9BZE7 217 aa26.91■■□□□ 1.9
AP004608.1-202ENST00000533390 SALL3Q9BXA9 1300 aa26.91■■□□□ 1.9
AP004608.1-202ENST00000533390 MARCH10Q8NA82 808 aaPredicted RBP26.9■■□□□ 1.9
AP004608.1-202ENST00000533390 IL1RAPL2Q9NP60 686 aa26.89■■□□□ 1.9
AP004608.1-202ENST00000533390 BCL9LQ86UU0 1499 aa26.89■■□□□ 1.9
AP004608.1-202ENST00000533390 A0A087WZG4 1122 aa26.89■■□□□ 1.89
AP004608.1-202ENST00000533390 A0A0G2JS52 829 aa26.89■■□□□ 1.89
AP004608.1-202ENST00000533390 ZBTB3Q9H5J0 574 aa26.89■■□□□ 1.89
AP004608.1-202ENST00000533390 ERC1Q8IUD2 1116 aa26.88■■□□□ 1.89
AP004608.1-202ENST00000533390 ZNF330Q9Y3S2 320 aaPredicted RBP26.88■■□□□ 1.89
AP004608.1-202ENST00000533390 COL15A1P39059 1388 aa26.87■■□□□ 1.89
AP004608.1-202ENST00000533390 SDSP20132 328 aa26.87■■□□□ 1.89
AP004608.1-202ENST00000533390 CASC1Q6TDU7 716 aa26.87■■□□□ 1.89
AP004608.1-202ENST00000533390 UBE3BQ7Z3V4 1068 aa26.87■■□□□ 1.89
AP004608.1-202ENST00000533390 KIF6Q6ZMV9 814 aa26.87■■□□□ 1.89
AP004608.1-202ENST00000533390 FNBP4Q8N3X1 1017 aaPredicted RBP26.87■■□□□ 1.89
AP004608.1-202ENST00000533390 CWC25Q9NXE8 425 aaPredicted RBP26.87■■□□□ 1.89
AP004608.1-202ENST00000533390 STAP2Q9UGK3 403 aa26.87■■□□□ 1.89
AP004608.1-202ENST00000533390 AOX1Q06278 1338 aa26.86■■□□□ 1.89
AP004608.1-202ENST00000533390 FAM98CQ17RN3 349 aaKnown RBP26.86■■□□□ 1.89
AP004608.1-202ENST00000533390 ACSBG1Q96GR2 724 aa26.86■■□□□ 1.89
AP004608.1-202ENST00000533390 TJP1Q07157 1748 aa26.86■■□□□ 1.89
AP004608.1-202ENST00000533390 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.86■■□□□ 1.89
AP004608.1-202ENST00000533390 TUBGCP6Q96RT7 1819 aa26.85■■□□□ 1.89
AP004608.1-202ENST00000533390 CYP19A1P11511 503 aaPredicted RBP26.85■■□□□ 1.89
AP004608.1-202ENST00000533390 CCDC191Q8NCU4 936 aa26.85■■□□□ 1.89
AP004608.1-202ENST00000533390 SLC4A9Q96Q91 983 aa26.85■■□□□ 1.89
AP004608.1-202ENST00000533390 PA2G4Q9UQ80 394 aaKnown RBP26.85■■□□□ 1.89
AP004608.1-202ENST00000533390 G3BP1Q13283 466 aaKnown RBP eCLIP26.84■■□□□ 1.89
AP004608.1-202ENST00000533390 USP21Q9UK80 565 aa26.83■■□□□ 1.89
AP004608.1-202ENST00000533390 NUTM1Q86Y26 1132 aa26.83■■□□□ 1.88
AP004608.1-202ENST00000533390 CLASRPQ8N2M8 674 aaKnown RBP26.83■■□□□ 1.88
AP004608.1-202ENST00000533390 JARID2Q92833 1246 aaPredicted RBP26.83■■□□□ 1.88
AP004608.1-202ENST00000533390 H7C1W4 665 aa26.82■■□□□ 1.88
AP004608.1-202ENST00000533390 BECN1Q14457 450 aa26.82■■□□□ 1.88
AP004608.1-202ENST00000533390 EPHA10Q5JZY3 1008 aa26.82■■□□□ 1.88
AP004608.1-202ENST00000533390 CASP7P55210 303 aa26.81■■□□□ 1.88
AP004608.1-202ENST00000533390 TSHZ3Q63HK5 1081 aa26.81■■□□□ 1.88
AP004608.1-202ENST00000533390 RABL6Q3YEC7 729 aaPredicted RBP26.81■■□□□ 1.88
AP004608.1-202ENST00000533390 ARXQ96QS3 562 aa26.81■■□□□ 1.88
AP004608.1-202ENST00000533390 TCIRG1Q13488 830 aa26.8■■□□□ 1.88
AP004608.1-202ENST00000533390 MEX3CQ5U5Q3 659 aaKnown RBP26.8■■□□□ 1.88
AP004608.1-202ENST00000533390 RBM25P49756 843 aaKnown RBP26.79■■□□□ 1.88
AP004608.1-202ENST00000533390 MYT1Q01538 1121 aa26.79■■□□□ 1.88
AP004608.1-202ENST00000533390 ISCA1Q9BUE6 129 aa26.79■■□□□ 1.88
AP004608.1-202ENST00000533390 MAP3K15Q6ZN16 1313 aa26.78■■□□□ 1.88
AP004608.1-202ENST00000533390 ZBTB1Q9Y2K1 713 aa26.78■■□□□ 1.88
AP004608.1-202ENST00000533390 AK9Q5TCS8 1911 aa26.78■■□□□ 1.88
AP004608.1-202ENST00000533390 TRIM6-TRIM34B2RNG4 842 aa26.77■■□□□ 1.88
AP004608.1-202ENST00000533390 SMARCC1Q92922 1105 aaPredicted RBP26.77■■□□□ 1.88
AP004608.1-202ENST00000533390 HSPA1LP34931 641 aa26.76■■□□□ 1.87
AP004608.1-202ENST00000533390 ATP6V1AP38606 617 aa26.76■■□□□ 1.87
AP004608.1-202ENST00000533390 IL6STP40189 918 aaPredicted RBP26.76■■□□□ 1.87
AP004608.1-202ENST00000533390 SLC4A3P48751 1232 aa26.76■■□□□ 1.87
AP004608.1-202ENST00000533390 HSP90AB3PQ58FF7 597 aa26.76■■□□□ 1.87
AP004608.1-202ENST00000533390 SIL1Q9H173 461 aa26.76■■□□□ 1.87
AP004608.1-202ENST00000533390 COPRSQ9NQ92 184 aa26.76■■□□□ 1.87
AP004608.1-202ENST00000533390 TTC41PQ6P2S7 1318 aa26.76■■□□□ 1.87
AP004608.1-202ENST00000533390 ANKRD36CQ5JPF3 1778 aa26.75■■□□□ 1.87
AP004608.1-202ENST00000533390 CICQ96RK0 1608 aaPredicted RBP26.75■■□□□ 1.87
AP004608.1-202ENST00000533390 IFIT2P09913 472 aaKnown RBP26.75■■□□□ 1.87
AP004608.1-202ENST00000533390 TRIM28Q13263 835 aaKnown RBP26.75■■□□□ 1.87
AP004608.1-202ENST00000533390 GIGYF2Q6Y7W6 1299 aaKnown RBP26.75■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms