RNA–Protein interactions for RNA: ENST00000532475.1

NUP98-219, Transcript of nucleoporin 98, humanhuman

TSL 4

Gene NUP98, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-219ENST00000532475 ERFEQ4G0M1 354 aa11.34□□□□□ -0.59
NUP98-219ENST00000532475 AMOTQ4VCS5 1084 aa11.34□□□□□ -0.59
NUP98-219ENST00000532475 CHADLQ6NUI6 762 aa11.34□□□□□ -0.59
NUP98-219ENST00000532475 BICDL1Q6ZP65 573 aa11.34□□□□□ -0.59
NUP98-219ENST00000532475 LGR6Q9HBX8 967 aa11.34□□□□□ -0.59
NUP98-219ENST00000532475 SOS1Q07889 1333 aaPredicted RBP11.34□□□□□ -0.59
NUP98-219ENST00000532475 COL5A3P25940 1745 aaPredicted RBP11.33□□□□□ -0.6
NUP98-219ENST00000532475 TESPA1A2RU30 521 aaPredicted RBP11.33□□□□□ -0.6
NUP98-219ENST00000532475 VEGFBP49765 207 aa11.33□□□□□ -0.6
NUP98-219ENST00000532475 C1orf141Q5JVX7 400 aa11.33□□□□□ -0.6
NUP98-219ENST00000532475 PRDM10Q9NQV6 1147 aa11.33□□□□□ -0.6
NUP98-219ENST00000532475 ZBTB1Q9Y2K1 713 aa11.33□□□□□ -0.6
NUP98-219ENST00000532475 TNRC6CQ9HCJ0 1690 aaKnown RBP11.33□□□□□ -0.6
NUP98-219ENST00000532475 CARMIL3Q8ND23 1372 aa11.32□□□□□ -0.6
NUP98-219ENST00000532475 LBX1P52954 281 aa11.32□□□□□ -0.6
NUP98-219ENST00000532475 SMYD5Q6GMV2 418 aa11.32□□□□□ -0.6
NUP98-219ENST00000532475 ZNF622Q969S3 477 aaKnown RBP eCLIP11.32□□□□□ -0.63e-11■□□□□ 10.6
NUP98-219ENST00000532475 ZNF831Q5JPB2 1677 aa11.31□□□□□ -0.6
NUP98-219ENST00000532475 KIF20BQ96Q89 1820 aa11.31□□□□□ -0.6
NUP98-219ENST00000532475 SEMA3EO15041 775 aa11.31□□□□□ -0.6
NUP98-219ENST00000532475 CANXP27824 592 aaKnown RBP11.31□□□□□ -0.6
NUP98-219ENST00000532475 SULT6B1Q6IMI4 303 aa11.31□□□□□ -0.6
NUP98-219ENST00000532475 PASKQ96RG2 1323 aa11.31□□□□□ -0.6
NUP98-219ENST00000532475 CNTNAP1P78357 1384 aa11.3□□□□□ -0.6
NUP98-219ENST00000532475 ITGBL1O95965 494 aaPredicted RBP11.3□□□□□ -0.6
NUP98-219ENST00000532475 CHRM1P11229 460 aaPredicted RBP11.3□□□□□ -0.6
NUP98-219ENST00000532475 CTCFP49711 727 aaPredicted RBP11.3□□□□□ -0.6
NUP98-219ENST00000532475 TBC1D9BQ66K14 1250 aa11.3□□□□□ -0.6
NUP98-219ENST00000532475 WBP1LQ9NX94 342 aa11.3□□□□□ -0.6
NUP98-219ENST00000532475 FAM161AQ3B820 660 aa11.29□□□□□ -0.6
NUP98-219ENST00000532475 IL27Q8NEV9 243 aa11.29□□□□□ -0.6
NUP98-219ENST00000532475 POLR3GLQ9BT43 218 aa11.29□□□□□ -0.6
NUP98-219ENST00000532475 SLC52A2Q9HAB3 445 aa11.29□□□□□ -0.6
NUP98-219ENST00000532475 ADAMTS7Q9UKP4 1686 aa11.29□□□□□ -0.6
NUP98-219ENST00000532475 CCDC88AQ3V6T2 1871 aa11.28□□□□□ -0.6
NUP98-219ENST00000532475 ABHD8Q96I13 439 aa11.28□□□□□ -0.6
NUP98-219ENST00000532475 C1orf115Q9H7X2 142 aa11.28□□□□□ -0.6
NUP98-219ENST00000532475 COL15A1P39059 1388 aa11.28□□□□□ -0.6
NUP98-219ENST00000532475 TMEM88BA6NKF7 163 aa11.27□□□□□ -0.61
NUP98-219ENST00000532475 EIF5P55010 431 aaKnown RBP11.27□□□□□ -0.61
NUP98-219ENST00000532475 E2F4Q16254 413 aa11.27□□□□□ -0.61
NUP98-219ENST00000532475 PRR5LQ6MZQ0 368 aa11.27□□□□□ -0.61
NUP98-219ENST00000532475 AIDAQ96BJ3 306 aa11.27□□□□□ -0.61
NUP98-219ENST00000532475 BRIP1Q9BX63 1249 aa11.27□□□□□ -0.61
NUP98-219ENST00000532475 TAOK3Q9H2K8 898 aa11.27□□□□□ -0.61
NUP98-219ENST00000532475 TAF1DQ9H5J8 278 aaPredicted RBP11.27□□□□□ -0.61
NUP98-219ENST00000532475 TBC1D2BQ9UPU7 963 aa11.27□□□□□ -0.61
NUP98-219ENST00000532475 AFDNP55196 1824 aaKnown RBP11.27□□□□□ -0.61
NUP98-219ENST00000532475 TJP1Q07157 1748 aa11.26□□□□□ -0.61
NUP98-219ENST00000532475 ANKRD26Q9UPS8 1709 aa11.26□□□□□ -0.61
NUP98-219ENST00000532475 RNMTO43148 476 aaKnown RBP11.26□□□□□ -0.61
NUP98-219ENST00000532475 HSPA8P11142 646 aaKnown RBP11.26□□□□□ -0.61
NUP98-219ENST00000532475 IL13P35225 146 aa11.26□□□□□ -0.61
NUP98-219ENST00000532475 PDE6BP35913 854 aa11.26□□□□□ -0.61
NUP98-219ENST00000532475 AKAP4Q5JQC9 854 aa11.26□□□□□ -0.61
NUP98-219ENST00000532475 LDHDQ86WU2 507 aa11.26□□□□□ -0.61
NUP98-219ENST00000532475 DEFB115Q30KQ5 88 aa11.25□□□□□ -0.61
NUP98-219ENST00000532475 EAPPQ56P03 285 aaPredicted RBP11.25□□□□□ -0.61
NUP98-219ENST00000532475 PANK3Q9H999 370 aa11.25□□□□□ -0.61
NUP98-219ENST00000532475 APBB1O00213 710 aa11.24□□□□□ -0.61
NUP98-219ENST00000532475 SRGNP10124 158 aa11.24□□□□□ -0.61
NUP98-219ENST00000532475 MAP1SQ66K74 1059 aaPredicted RBP11.24□□□□□ -0.61
NUP98-219ENST00000532475 PRPF40BQ6NWY9 871 aaKnown RBP11.24□□□□□ -0.61
NUP98-219ENST00000532475 OLFM4Q6UX06 510 aa11.24□□□□□ -0.61
NUP98-219ENST00000532475 C7orf43Q8WVR3 580 aa11.24□□□□□ -0.61
NUP98-219ENST00000532475 L3MBTL3Q96JM7 780 aaPredicted RBP11.24□□□□□ -0.61
NUP98-219ENST00000532475 CLEC11AQ9Y240 323 aa11.24□□□□□ -0.61
NUP98-219ENST00000532475 ZNF330Q9Y3S2 320 aaPredicted RBP11.24□□□□□ -0.61
NUP98-219ENST00000532475 LTBP3Q9NS15 1303 aa11.24□□□□□ -0.61
NUP98-219ENST00000532475 NRXN2Q9P2S2 1712 aa11.23□□□□□ -0.61
NUP98-219ENST00000532475 IQCA1LA6NCM1 817 aa11.23□□□□□ -0.61
NUP98-219ENST00000532475 CCDC85CA6NKD9 419 aa11.23□□□□□ -0.61
NUP98-219ENST00000532475 HMOX1P09601 288 aa11.23□□□□□ -0.61
NUP98-219ENST00000532475 FMR1Q06787 632 aaKnown RBP eCLIP11.23□□□□□ -0.614e-10■■□□□ 12.7
NUP98-219ENST00000532475 MTHFSDQ2M296 383 aaKnown RBP11.23□□□□□ -0.61
NUP98-219ENST00000532475 CNTROBQ8N137 903 aa11.23□□□□□ -0.61
NUP98-219ENST00000532475 RASSF10A6NK89 507 aa11.22□□□□□ -0.61
NUP98-219ENST00000532475 STARD3NLO95772 234 aa11.22□□□□□ -0.61
NUP98-219ENST00000532475 A1BGP04217 495 aa11.22□□□□□ -0.61
NUP98-219ENST00000532475 MORC1Q86VD1 984 aa11.22□□□□□ -0.61
NUP98-219ENST00000532475 CNKSR1Q969H4 720 aa11.22□□□□□ -0.61
NUP98-219ENST00000532475 ZNF496Q96IT1 587 aaPredicted RBP11.22□□□□□ -0.61
NUP98-219ENST00000532475 WDR33Q9C0J8 1336 aaKnown RBP11.22□□□□□ -0.61
NUP98-219ENST00000532475 ZNF541Q9H0D2 1346 aa11.22□□□□□ -0.61
NUP98-219ENST00000532475 KDM4CQ9H3R0 1056 aa11.22□□□□□ -0.61
NUP98-219ENST00000532475 ZNF277Q9NRM2 450 aaPredicted RBP11.22□□□□□ -0.61
NUP98-219ENST00000532475 PDZRN3Q9UPQ7 1066 aa11.22□□□□□ -0.61
NUP98-219ENST00000532475 TIAM2Q8IVF5 1701 aa11.21□□□□□ -0.61
NUP98-219ENST00000532475 A0A087WZG4 1122 aa11.21□□□□□ -0.61
NUP98-219ENST00000532475 EPHX2P34913 555 aa11.21□□□□□ -0.61
NUP98-219ENST00000532475 RGS19P49795 217 aa11.21□□□□□ -0.61
NUP98-219ENST00000532475 MLLT1Q03111 559 aaPredicted RBP11.21□□□□□ -0.61
NUP98-219ENST00000532475 STYK1Q6J9G0 422 aa11.21□□□□□ -0.61
NUP98-219ENST00000532475 SETDB2Q96T68 719 aa11.21□□□□□ -0.61
NUP98-219ENST00000532475 HACL1Q9UJ83 578 aa11.21□□□□□ -0.61
NUP98-219ENST00000532475 RNF123Q5XPI4 1314 aa11.2□□□□□ -0.62
NUP98-219ENST00000532475 MAP2K1Q02750 393 aaPredicted RBP11.2□□□□□ -0.62
NUP98-219ENST00000532475 CNBD1Q8NA66 436 aa11.2□□□□□ -0.62
NUP98-219ENST00000532475 MASTLQ96GX5 879 aa11.2□□□□□ -0.62
NUP98-219ENST00000532475 TSKSQ9UJT2 592 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms