RNA–Protein interactions for RNA: ENST00000531336.1

SMPD1-206, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 2

Gene SMPD1, Length 650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-206ENST00000531336 STK31Q9BXU1 1019 aa17.79■□□□□ 0.44
SMPD1-206ENST00000531336 ANKRD36CQ5JPF3 1778 aa17.79■□□□□ 0.44
SMPD1-206ENST00000531336 POLD1P28340 1107 aa17.78■□□□□ 0.44
SMPD1-206ENST00000531336 PTGER2P43116 358 aa17.78■□□□□ 0.44
SMPD1-206ENST00000531336 BCL2L12Q9HB09 334 aa17.78■□□□□ 0.44
SMPD1-206ENST00000531336 HYPKQ9NX55 129 aa17.78■□□□□ 0.44
SMPD1-206ENST00000531336 MAP3K15Q6ZN16 1313 aa17.77■□□□□ 0.44
SMPD1-206ENST00000531336 COPS6Q7L5N1 327 aa17.77■□□□□ 0.44
SMPD1-206ENST00000531336 NLGN1Q8N2Q7 840 aa17.77■□□□□ 0.44
SMPD1-206ENST00000531336 SGIP1Q9BQI5 828 aa17.77■□□□□ 0.44
SMPD1-206ENST00000531336 ZBTB3Q9H5J0 574 aa17.77■□□□□ 0.44
SMPD1-206ENST00000531336 AFDNP55196 1824 aaKnown RBP17.77■□□□□ 0.43
SMPD1-206ENST00000531336 MMP10P09238 476 aa17.76■□□□□ 0.43
SMPD1-206ENST00000531336 PHAXQ9H814 394 aaKnown RBP17.76■□□□□ 0.43
SMPD1-206ENST00000531336 ZNF652Q9Y2D9 606 aa17.76■□□□□ 0.43
SMPD1-206ENST00000531336 BICDL1Q6ZP65 573 aa17.75■□□□□ 0.43
SMPD1-206ENST00000531336 PPP1R1BQ9UD71 204 aaPredicted RBP17.75■□□□□ 0.43
SMPD1-206ENST00000531336 SLC4A2P04920 1241 aa17.74■□□□□ 0.43
SMPD1-206ENST00000531336 NFIXQ14938 502 aa17.74■□□□□ 0.43
SMPD1-206ENST00000531336 HLFQ16534 295 aa17.74■□□□□ 0.43
SMPD1-206ENST00000531336 TBC1D9BQ66K14 1250 aa17.74■□□□□ 0.43
SMPD1-206ENST00000531336 ERVV-1B6SEH8 477 aa17.73■□□□□ 0.43
SMPD1-206ENST00000531336 DDR1Q08345 913 aa17.73■□□□□ 0.43
SMPD1-206ENST00000531336 PARP3Q9Y6F1 533 aa17.73■□□□□ 0.43
SMPD1-206ENST00000531336 NRXN2Q9P2S2 1712 aa17.72■□□□□ 0.43
SMPD1-206ENST00000531336 CLEC4GQ6UXB4 293 aa17.72■□□□□ 0.43
SMPD1-206ENST00000531336 G2E3Q7L622 706 aa17.72■□□□□ 0.43
SMPD1-206ENST00000531336 ATP10DQ9P241 1426 aa17.72■□□□□ 0.43
SMPD1-206ENST00000531336 CARMIL3Q8ND23 1372 aa17.71■□□□□ 0.43
SMPD1-206ENST00000531336 POLRMTO00411 1230 aaKnown RBP17.71■□□□□ 0.43
SMPD1-206ENST00000531336 TM4SF1P30408 202 aa17.71■□□□□ 0.43
SMPD1-206ENST00000531336 ANKRD13DQ6ZTN6 518 aa17.71■□□□□ 0.43
SMPD1-206ENST00000531336 KLHL34Q8N239 644 aa17.71■□□□□ 0.43
SMPD1-206ENST00000531336 PLBD2Q8NHP8 589 aa17.71■□□□□ 0.43
SMPD1-206ENST00000531336 BCL2L13Q9BXK5 485 aa17.71■□□□□ 0.43
SMPD1-206ENST00000531336 RGL2O15211 777 aa17.7■□□□□ 0.42
SMPD1-206ENST00000531336 DDX58O95786 925 aaKnown RBP17.7■□□□□ 0.42
SMPD1-206ENST00000531336 CT47B1P0C2W7 299 aaPredicted RBP17.7■□□□□ 0.42
SMPD1-206ENST00000531336 FLIIQ13045 1269 aa17.7■□□□□ 0.42
SMPD1-206ENST00000531336 GIGYF2Q6Y7W6 1299 aaKnown RBP17.7■□□□□ 0.42
SMPD1-206ENST00000531336 SETDB2Q96T68 719 aa17.7■□□□□ 0.42
SMPD1-206ENST00000531336 NIP7Q9Y221 180 aaKnown RBP eCLIP17.7■□□□□ 0.42
SMPD1-206ENST00000531336 KIF13BQ9NQT8 1826 aa17.7■□□□□ 0.42
SMPD1-206ENST00000531336 GPTP24298 496 aa17.69■□□□□ 0.42
SMPD1-206ENST00000531336 RIC3Q7Z5B4 369 aa17.69■□□□□ 0.42
SMPD1-206ENST00000531336 SSH1Q8WYL5 1049 aa17.69■□□□□ 0.42
SMPD1-206ENST00000531336 ZNF428Q96B54 188 aa17.69■□□□□ 0.42
SMPD1-206ENST00000531336 SMC4Q9NTJ3 1288 aa17.69■□□□□ 0.42
SMPD1-206ENST00000531336 ADCY9O60503 1353 aa17.68■□□□□ 0.42
SMPD1-206ENST00000531336 FAM177BA6PVY3 158 aa17.68■□□□□ 0.42
SMPD1-206ENST00000531336 SERPINB2P05120 415 aa17.68■□□□□ 0.42
SMPD1-206ENST00000531336 FKBP5Q13451 457 aaPredicted RBP17.68■□□□□ 0.42
SMPD1-206ENST00000531336 C10orf71Q711Q0 1435 aa17.67■□□□□ 0.42
SMPD1-206ENST00000531336 ALDH1L2Q3SY69 923 aa17.67■□□□□ 0.42
SMPD1-206ENST00000531336 HSP90AB3PQ58FF7 597 aa17.67■□□□□ 0.42
SMPD1-206ENST00000531336 MRPL50Q8N5N7 158 aaKnown RBP17.67■□□□□ 0.42
SMPD1-206ENST00000531336 MAP3K2Q9Y2U5 619 aa17.67■□□□□ 0.42
SMPD1-206ENST00000531336 UBN2Q6ZU65 1347 aa17.67■□□□□ 0.42
SMPD1-206ENST00000531336 ANKRD31Q8N7Z5 1873 aa17.67■□□□□ 0.42
SMPD1-206ENST00000531336 PI4KAP2A4QPH2 592 aa17.66■□□□□ 0.42
SMPD1-206ENST00000531336 NPHP1O15259 732 aa17.66■□□□□ 0.42
SMPD1-206ENST00000531336 RARSP54136 660 aaKnown RBP17.66■□□□□ 0.42
SMPD1-206ENST00000531336 TCIRG1Q13488 830 aa17.66■□□□□ 0.42
SMPD1-206ENST00000531336 KSR2Q6VAB6 950 aa17.66■□□□□ 0.42
SMPD1-206ENST00000531336 ZNF34Q8IZ26 560 aa17.66■□□□□ 0.42
SMPD1-206ENST00000531336 PI4KAP1Q8N8J0 262 aa17.66■□□□□ 0.42
SMPD1-206ENST00000531336 FHDC1Q9C0D6 1143 aaPredicted RBP17.66■□□□□ 0.42
SMPD1-206ENST00000531336 KIAA1551Q9HCM1 1747 aa17.65■□□□□ 0.42
SMPD1-206ENST00000531336 NBPF5PQ86XG9 351 aaPredicted RBP17.65■□□□□ 0.42
SMPD1-206ENST00000531336 MYD88Q99836 296 aa17.65■□□□□ 0.42
SMPD1-206ENST00000531336 N4BP2Q86UW6 1770 aaPredicted RBP17.65■□□□□ 0.42
SMPD1-206ENST00000531336 ATP5J2-PTCD1G3V325 749 aa17.64■□□□□ 0.41
SMPD1-206ENST00000531336 CCDC24Q8N4L8 307 aa17.64■□□□□ 0.41
SMPD1-206ENST00000531336 CNBD1Q8NA66 436 aa17.64■□□□□ 0.41
SMPD1-206ENST00000531336 SUSD4Q5VX71 490 aa17.63■□□□□ 0.41
SMPD1-206ENST00000531336 PRR5LQ6MZQ0 368 aa17.63■□□□□ 0.41
SMPD1-206ENST00000531336 METTL22Q9BUU2 404 aaPredicted RBP17.63■□□□□ 0.41
SMPD1-206ENST00000531336 TNRC6CQ9HCJ0 1690 aaKnown RBP17.63■□□□□ 0.41
SMPD1-206ENST00000531336 IBTKQ9P2D0 1353 aaPredicted RBP17.63■□□□□ 0.41
SMPD1-206ENST00000531336 COL11A2P13942 1736 aaPredicted RBP17.62■□□□□ 0.41
SMPD1-206ENST00000531336 F6X3S4 739 aa17.62■□□□□ 0.41
SMPD1-206ENST00000531336 ST5P78524 1137 aa17.62■□□□□ 0.41
SMPD1-206ENST00000531336 PARP10Q53GL7 1025 aa17.62■□□□□ 0.41
SMPD1-206ENST00000531336 NLRP10Q86W26 655 aa17.62■□□□□ 0.41
SMPD1-206ENST00000531336 DNAAF4Q8WXU2 420 aa17.62■□□□□ 0.41
SMPD1-206ENST00000531336 ISCA1Q9BUE6 129 aa17.62■□□□□ 0.41
SMPD1-206ENST00000531336 NYXQ9GZU5 481 aa17.62■□□□□ 0.41
SMPD1-206ENST00000531336 LAMB2P55268 1798 aa17.61■□□□□ 0.41
SMPD1-206ENST00000531336 SRCAPQ6ZRS2 3230 aa17.61■□□□□ 0.41
SMPD1-206ENST00000531336 NTSR2O95665 410 aa17.61■□□□□ 0.41
SMPD1-206ENST00000531336 NEXNQ0ZGT2 675 aa17.61■□□□□ 0.41
SMPD1-206ENST00000531336 PPP1R42Q7Z4L9 355 aa17.61■□□□□ 0.41
SMPD1-206ENST00000531336 NUTM1Q86Y26 1132 aa17.61■□□□□ 0.41
SMPD1-206ENST00000531336 NLGN2Q8NFZ4 835 aa17.61■□□□□ 0.41
SMPD1-206ENST00000531336 CD2APQ9Y5K6 639 aa17.61■□□□□ 0.41
SMPD1-206ENST00000531336 PTPRCP08575 1304 aa17.61■□□□□ 0.41
SMPD1-206ENST00000531336 ABCC12Q96J65 1359 aa17.61■□□□□ 0.41
SMPD1-206ENST00000531336 DLEC1Q9Y238 1755 aa17.61■□□□□ 0.41
SMPD1-206ENST00000531336 BCAR3O75815 825 aa17.6■□□□□ 0.41
SMPD1-206ENST00000531336 GTF2E1P29083 439 aaPredicted RBP17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms