RNA–Protein interactions for RNA: ENST00000530068.5

CTNND1-224, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-224ENST00000530068 CNTNAP1P78357 1384 aa14.9□□□□□ -0.02
CTNND1-224ENST00000530068 BTBD11A6QL63 1104 aa14.9□□□□□ -0.02
CTNND1-224ENST00000530068 PER1O15534 1290 aaPredicted RBP14.9□□□□□ -0.02
CTNND1-224ENST00000530068 NPR1P16066 1061 aa14.9□□□□□ -0.02
CTNND1-224ENST00000530068 CC2D1BQ5T0F9 858 aaKnown RBP14.9□□□□□ -0.02
CTNND1-224ENST00000530068 KIF7Q2M1P5 1343 aa14.9□□□□□ -0.02
CTNND1-224ENST00000530068 NPC1L1Q9UHC9 1359 aa14.89□□□□□ -0.03
CTNND1-224ENST00000530068 CTCFP49711 727 aaPredicted RBP14.89□□□□□ -0.03
CTNND1-224ENST00000530068 FKBP4Q02790 459 aaKnown RBP eCLIP14.89□□□□□ -0.03
CTNND1-224ENST00000530068 TPTE2Q6XPS3 522 aa14.89□□□□□ -0.03
CTNND1-224ENST00000530068 RTKN2Q8IZC4 609 aa14.89□□□□□ -0.03
CTNND1-224ENST00000530068 TAF1DQ9H5J8 278 aaPredicted RBP14.89□□□□□ -0.03
CTNND1-224ENST00000530068 TIAM2Q8IVF5 1701 aa14.89□□□□□ -0.03
CTNND1-224ENST00000530068 CEMIPQ8WUJ3 1361 aa14.88□□□□□ -0.03
CTNND1-224ENST00000530068 TMEM88BA6NKF7 163 aa14.88□□□□□ -0.03
CTNND1-224ENST00000530068 C7orf43Q8WVR3 580 aa14.88□□□□□ -0.03
CTNND1-224ENST00000530068 CFAP53Q96M91 514 aa14.88□□□□□ -0.03
CTNND1-224ENST00000530068 HACL1Q9UJ83 578 aa14.88□□□□□ -0.03
CTNND1-224ENST00000530068 PASKQ96RG2 1323 aa14.88□□□□□ -0.03
CTNND1-224ENST00000530068 KLRG2A4D1S0 409 aaPredicted RBP14.87□□□□□ -0.03
CTNND1-224ENST00000530068 SNRPA1P09661 255 aaKnown RBP14.87□□□□□ -0.03
CTNND1-224ENST00000530068 POTEIP0CG38 1075 aa14.87□□□□□ -0.03
CTNND1-224ENST00000530068 POTEJP0CG39 1038 aa14.87□□□□□ -0.03
CTNND1-224ENST00000530068 PNMA8AQ86V59 439 aaPredicted RBP14.87□□□□□ -0.03
CTNND1-224ENST00000530068 RTF1Q92541 710 aaKnown RBP14.87□□□□□ -0.03
CTNND1-224ENST00000530068 NUDCQ9Y266 331 aa14.87□□□□□ -0.03
CTNND1-224ENST00000530068 UBR2Q8IWV8 1755 aa14.87□□□□□ -0.03
CTNND1-224ENST00000530068 FOXN1O15353 648 aa14.86□□□□□ -0.03
CTNND1-224ENST00000530068 ALDH1B1P30837 517 aa14.86□□□□□ -0.03
CTNND1-224ENST00000530068 EAPPQ56P03 285 aaPredicted RBP14.86□□□□□ -0.03
CTNND1-224ENST00000530068 CCER1Q8TC90 406 aaPredicted RBP14.86□□□□□ -0.03
CTNND1-224ENST00000530068 CLEC11AQ9Y240 323 aa14.86□□□□□ -0.03
CTNND1-224ENST00000530068 SCN7AQ01118 1682 aa14.85□□□□□ -0.03
CTNND1-224ENST00000530068 USP16Q9Y5T5 823 aa14.85□□□□□ -0.03
CTNND1-224ENST00000530068 FER1L6Q2WGJ9 1857 aa14.84□□□□□ -0.03
CTNND1-224ENST00000530068 ITGBL1O95965 494 aaPredicted RBP14.84□□□□□ -0.03
CTNND1-224ENST00000530068 GTF2E1P29083 439 aaPredicted RBP14.84□□□□□ -0.03
CTNND1-224ENST00000530068 PRKAR2BP31323 418 aa14.84□□□□□ -0.03
CTNND1-224ENST00000530068 EPHX2P34913 555 aa14.84□□□□□ -0.03
CTNND1-224ENST00000530068 VEGFBP49765 207 aa14.84□□□□□ -0.03
CTNND1-224ENST00000530068 CC2D2BQ6DHV5 1058 aa14.84□□□□□ -0.03
CTNND1-224ENST00000530068 ZNF277Q9NRM2 450 aaPredicted RBP14.84□□□□□ -0.03
CTNND1-224ENST00000530068 NIP7Q9Y221 180 aaKnown RBP eCLIP14.84□□□□□ -0.03
CTNND1-224ENST00000530068 ANKRD31Q8N7Z5 1873 aa14.83□□□□□ -0.04
CTNND1-224ENST00000530068 KCNQ3O43525 872 aa14.83□□□□□ -0.04
CTNND1-224ENST00000530068 GRIPAP1Q4V328 841 aa14.83□□□□□ -0.04
CTNND1-224ENST00000530068 JDP2Q8WYK2 163 aa14.83□□□□□ -0.04
CTNND1-224ENST00000530068 WBP1LQ9NX94 342 aa14.83□□□□□ -0.04
CTNND1-224ENST00000530068 DICER1Q9UPY3 1922 aaKnown RBP14.83□□□□□ -0.04
CTNND1-224ENST00000530068 COL3A1P02461 1466 aaPredicted RBP14.82□□□□□ -0.04
CTNND1-224ENST00000530068 CCDC88AQ3V6T2 1871 aa14.82□□□□□ -0.04
CTNND1-224ENST00000530068 FZD9O00144 591 aa14.82□□□□□ -0.04
CTNND1-224ENST00000530068 HTATSF1O43719 755 aaKnown RBP14.82□□□□□ -0.04
CTNND1-224ENST00000530068 IARSP41252 1262 aaKnown RBP14.82□□□□□ -0.04
CTNND1-224ENST00000530068 MAP2K1Q02750 393 aaPredicted RBP14.82□□□□□ -0.04
CTNND1-224ENST00000530068 DEFB115Q30KQ5 88 aa14.82□□□□□ -0.04
CTNND1-224ENST00000530068 GPC2Q8N158 579 aa14.82□□□□□ -0.04
CTNND1-224ENST00000530068 SYNE4Q8N205 404 aa14.82□□□□□ -0.04
CTNND1-224ENST00000530068 PHACTR3Q96KR7 559 aa14.82□□□□□ -0.04
CTNND1-224ENST00000530068 NYXQ9GZU5 481 aa14.82□□□□□ -0.04
CTNND1-224ENST00000530068 RSPH6AQ9H0K4 717 aa14.82□□□□□ -0.04
CTNND1-224ENST00000530068 RASSF10A6NK89 507 aa14.81□□□□□ -0.04
CTNND1-224ENST00000530068 EIF6P56537 245 aaKnown RBP14.81□□□□□ -0.04
CTNND1-224ENST00000530068 CNTROBQ8N137 903 aa14.81□□□□□ -0.04
CTNND1-224ENST00000530068 PSMD1Q99460 953 aa14.81□□□□□ -0.04
CTNND1-224ENST00000530068 ZNF541Q9H0D2 1346 aa14.81□□□□□ -0.04
CTNND1-224ENST00000530068 COL11A2P13942 1736 aaPredicted RBP14.8□□□□□ -0.04
CTNND1-224ENST00000530068 SLX4Q8IY92 1834 aa14.8□□□□□ -0.04
CTNND1-224ENST00000530068 LMOD1P29536 600 aaPredicted RBP14.8□□□□□ -0.04
CTNND1-224ENST00000530068 PIP4K2AP48426 406 aaPredicted RBP14.8□□□□□ -0.04
CTNND1-224ENST00000530068 SCN4AP35499 1836 aa14.79□□□□□ -0.04
CTNND1-224ENST00000530068 CNGB1Q14028 1251 aaPredicted RBP14.79□□□□□ -0.04
CTNND1-224ENST00000530068 RNF123Q5XPI4 1314 aa14.78□□□□□ -0.04
CTNND1-224ENST00000530068 FAM177BA6PVY3 158 aa14.78□□□□□ -0.04
CTNND1-224ENST00000530068 NBPF26B4DH59 902 aa14.78□□□□□ -0.04
CTNND1-224ENST00000530068 ERVV-1B6SEH8 477 aa14.78□□□□□ -0.04
CTNND1-224ENST00000530068 U2AF1L5P0DN76 240 aaPredicted RBP14.78□□□□□ -0.04
CTNND1-224ENST00000530068 LBX1P52954 281 aa14.78□□□□□ -0.04
CTNND1-224ENST00000530068 U2AF1Q01081 240 aaKnown RBP eCLIP14.78□□□□□ -0.042e-10■■□□□ 12.3
CTNND1-224ENST00000530068 TAF7Q15545 349 aaPredicted RBP14.78□□□□□ -0.04
CTNND1-224ENST00000530068 NBPF10Q6P3W6 841 aaKnown RBP14.78□□□□□ -0.04
CTNND1-224ENST00000530068 NBPF15Q8N660 670 aa14.78□□□□□ -0.04
CTNND1-224ENST00000530068 ABT1Q9ULW3 272 aaKnown RBP14.78□□□□□ -0.04
CTNND1-224ENST00000530068 PRAMEF22A3QJZ6 481 aa14.77□□□□□ -0.05
CTNND1-224ENST00000530068 NEFMP07197 916 aa14.77□□□□□ -0.05
CTNND1-224ENST00000530068 ECE1P42892 770 aa14.77□□□□□ -0.05
CTNND1-224ENST00000530068 CRY2Q49AN0 593 aa14.77□□□□□ -0.05
CTNND1-224ENST00000530068 MAP1SQ66K74 1059 aaPredicted RBP14.77□□□□□ -0.05
CTNND1-224ENST00000530068 MCM10Q7L590 875 aa14.77□□□□□ -0.05
CTNND1-224ENST00000530068 PNISRQ8TF01 805 aaKnown RBP14.77□□□□□ -0.05
CTNND1-224ENST00000530068 RPGRQ92834 1020 aaKnown RBP14.77□□□□□ -0.05
CTNND1-224ENST00000530068 BEGAINQ9BUH8 593 aa14.77□□□□□ -0.05
CTNND1-224ENST00000530068 TMX4Q9H1E5 349 aaPredicted RBP14.77□□□□□ -0.05
CTNND1-224ENST00000530068 VIRMAQ69YN4 1812 aaKnown RBP14.77□□□□□ -0.05
CTNND1-224ENST00000530068 WDR33Q9C0J8 1336 aaKnown RBP14.76□□□□□ -0.05
CTNND1-224ENST00000530068 OLFM4Q6UX06 510 aa14.76□□□□□ -0.05
CTNND1-224ENST00000530068 DDX21Q9NR30 783 aaKnown RBP eCLIP14.76□□□□□ -0.05
CTNND1-224ENST00000530068 SIPA1L3O60292 1781 aaPredicted RBP14.75□□□□□ -0.05
CTNND1-224ENST00000530068 HSPA8P11142 646 aaKnown RBP14.75□□□□□ -0.05
CTNND1-224ENST00000530068 HOXA10P31260 410 aaPredicted RBP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms