RNA–Protein interactions for RNA: ENST00000528232.5

CTNND1-218, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-218ENST00000528232 SOS1Q07889 1333 aaPredicted RBP8.41□□□□□ -1.06
CTNND1-218ENST00000528232 IDH1O75874 414 aaKnown RBP8.41□□□□□ -1.06
CTNND1-218ENST00000528232 CT47A1Q5JQC4 288 aaPredicted RBP8.41□□□□□ -1.06
CTNND1-218ENST00000528232 SCAND2PQ9GZW5 306 aaPredicted RBP8.41□□□□□ -1.06
CTNND1-218ENST00000528232 CCDC8Q9H0W5 538 aaPredicted RBP8.41□□□□□ -1.06
CTNND1-218ENST00000528232 NUTM2BA6NNL0 878 aaPredicted RBP8.41□□□□□ -1.06
CTNND1-218ENST00000528232 NUTM2EB1AL46 878 aaPredicted RBP8.41□□□□□ -1.06
CTNND1-218ENST00000528232 SERPINC1P01008 464 aa8.41□□□□□ -1.06
CTNND1-218ENST00000528232 MCM3P25205 808 aa8.41□□□□□ -1.06
CTNND1-218ENST00000528232 NUTM2AQ8IVF1 878 aaPredicted RBP8.41□□□□□ -1.06
CTNND1-218ENST00000528232 NEO1Q92859 1461 aa8.41□□□□□ -1.06
CTNND1-218ENST00000528232 SYCE3A1L190 88 aa8.41□□□□□ -1.06
CTNND1-218ENST00000528232 IFIT5Q13325 482 aaKnown RBP8.41□□□□□ -1.06
CTNND1-218ENST00000528232 AKAP4Q5JQC9 854 aa8.41□□□□□ -1.06
CTNND1-218ENST00000528232 C8orf58Q8NAV2 365 aa8.41□□□□□ -1.06
CTNND1-218ENST00000528232 ZNF622Q969S3 477 aaKnown RBP eCLIP8.41□□□□□ -1.063e-7■□□□□ 10.1
CTNND1-218ENST00000528232 LRP2BPQ9P2M1 347 aa8.41□□□□□ -1.06
CTNND1-218ENST00000528232 CEP131Q9UPN4 1083 aa8.41□□□□□ -1.06
CTNND1-218ENST00000528232 SPATA31E1Q6ZUB1 1445 aa8.41□□□□□ -1.06
CTNND1-218ENST00000528232 SMTNL1A8MU46 457 aa8.4□□□□□ -1.06
CTNND1-218ENST00000528232 TMCO3Q6UWJ1 677 aa8.4□□□□□ -1.06
CTNND1-218ENST00000528232 GPATCH11Q8N954 259 aa8.4□□□□□ -1.06
CTNND1-218ENST00000528232 SYNMO15061 1565 aa8.4□□□□□ -1.06
CTNND1-218ENST00000528232 A0A087WZG4 1122 aa8.4□□□□□ -1.06
CTNND1-218ENST00000528232 PI4KAP2A4QPH2 592 aa8.4□□□□□ -1.06
CTNND1-218ENST00000528232 PTCD1O75127 700 aaKnown RBP8.4□□□□□ -1.06
CTNND1-218ENST00000528232 FBLN1P23142 703 aa8.4□□□□□ -1.06
CTNND1-218ENST00000528232 FILIP1Q7Z7B0 1213 aa8.4□□□□□ -1.06
CTNND1-218ENST00000528232 PI4KAP1Q8N8J0 262 aa8.4□□□□□ -1.06
CTNND1-218ENST00000528232 CCDC94Q9BW85 323 aaPredicted RBP8.4□□□□□ -1.06
CTNND1-218ENST00000528232 ALDH1L1O75891 902 aa8.4□□□□□ -1.06
CTNND1-218ENST00000528232 SNRPA1P09661 255 aaKnown RBP8.4□□□□□ -1.06
CTNND1-218ENST00000528232 LIG1P18858 919 aa8.4□□□□□ -1.06
CTNND1-218ENST00000528232 STIM1Q13586 685 aa8.4□□□□□ -1.06
CTNND1-218ENST00000528232 ODF2Q5BJF6 829 aa8.4□□□□□ -1.06
CTNND1-218ENST00000528232 HMG20BQ9P0W2 317 aa8.4□□□□□ -1.06
CTNND1-218ENST00000528232 MAP3K5Q99683 1374 aa8.4□□□□□ -1.06
CTNND1-218ENST00000528232 GOLGA6L10A0A0M3HER8 536 aa8.4□□□□□ -1.07
CTNND1-218ENST00000528232 IKQ13123 557 aaPredicted RBP8.4□□□□□ -1.07
CTNND1-218ENST00000528232 CWC25Q9NXE8 425 aaPredicted RBP8.4□□□□□ -1.07
CTNND1-218ENST00000528232 SLC5A1P13866 664 aa8.4□□□□□ -1.07
CTNND1-218ENST00000528232 ATP8B2P98198 1209 aa8.4□□□□□ -1.07
CTNND1-218ENST00000528232 IQCEQ6IPM2 695 aa8.4□□□□□ -1.07
CTNND1-218ENST00000528232 KRI1Q8N9T8 703 aaKnown RBP8.4□□□□□ -1.07
CTNND1-218ENST00000528232 SNX21Q969T3 373 aa8.4□□□□□ -1.07
CTNND1-218ENST00000528232 MEIS3Q99687 375 aa8.4□□□□□ -1.07
CTNND1-218ENST00000528232 MBD5Q9P267 1494 aa8.4□□□□□ -1.07
CTNND1-218ENST00000528232 ANKRD18BA2A2Z9 1011 aa8.39□□□□□ -1.07
CTNND1-218ENST00000528232 VAMP4O75379 141 aa8.39□□□□□ -1.07
CTNND1-218ENST00000528232 SOGA3Q5TF21 947 aa8.39□□□□□ -1.07
CTNND1-218ENST00000528232 RHPN1Q8TCX5 695 aa8.39□□□□□ -1.07
CTNND1-218ENST00000528232 ZMYM3Q14202 1370 aa8.39□□□□□ -1.07
CTNND1-218ENST00000528232 ZHX1Q9UKY1 873 aaPredicted RBP8.39□□□□□ -1.07
CTNND1-218ENST00000528232 POTEB2H3BUK9 544 aa8.39□□□□□ -1.07
CTNND1-218ENST00000528232 SDSP20132 328 aa8.39□□□□□ -1.07
CTNND1-218ENST00000528232 HS1BP3Q53T59 392 aa8.39□□□□□ -1.07
CTNND1-218ENST00000528232 CCDC85AQ96PX6 553 aaPredicted RBP8.39□□□□□ -1.07
CTNND1-218ENST00000528232 PLCD4Q9BRC7 762 aa8.39□□□□□ -1.07
CTNND1-218ENST00000528232 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.39□□□□□ -1.071e-6■■■■■ 38.5
CTNND1-218ENST00000528232 TMCO5BA8MYB1 307 aa8.39□□□□□ -1.07
CTNND1-218ENST00000528232 ANAPC15P60006 121 aa8.39□□□□□ -1.07
CTNND1-218ENST00000528232 PPFIBP1Q86W92 1011 aa8.39□□□□□ -1.07
CTNND1-218ENST00000528232 GBP2P32456 591 aaPredicted RBP8.38□□□□□ -1.07
CTNND1-218ENST00000528232 BMS1Q14692 1282 aaKnown RBP8.38□□□□□ -1.07
CTNND1-218ENST00000528232 TTF1Q15361 905 aaPredicted RBP8.38□□□□□ -1.07
CTNND1-218ENST00000528232 MTHFSDQ2M296 383 aaKnown RBP8.38□□□□□ -1.07
CTNND1-218ENST00000528232 CADPS2Q86UW7 1296 aa8.38□□□□□ -1.07
CTNND1-218ENST00000528232 FEZ1Q99689 392 aa8.38□□□□□ -1.07
CTNND1-218ENST00000528232 CHPF2Q9P2E5 772 aa8.38□□□□□ -1.07
CTNND1-218ENST00000528232 PTPRTO14522 1441 aa8.38□□□□□ -1.07
CTNND1-218ENST00000528232 NF2P35240 595 aa8.38□□□□□ -1.07
CTNND1-218ENST00000528232 PDE1AP54750 535 aa8.38□□□□□ -1.07
CTNND1-218ENST00000528232 CBX1P83916 185 aa8.38□□□□□ -1.07
CTNND1-218ENST00000528232 MAP3K12Q12852 859 aa8.38□□□□□ -1.07
CTNND1-218ENST00000528232 CAVIN4Q5BKX8 364 aa8.38□□□□□ -1.07
CTNND1-218ENST00000528232 CCAR1Q8IX12 1150 aaKnown RBP8.38□□□□□ -1.07
CTNND1-218ENST00000528232 SPINK5Q9NQ38 1064 aaPredicted RBP8.38□□□□□ -1.07
CTNND1-218ENST00000528232 ZBTB40Q9NUA8 1239 aa8.38□□□□□ -1.07
CTNND1-218ENST00000528232 KIF1BO60333 1816 aa8.38□□□□□ -1.07
CTNND1-218ENST00000528232 ADCY10Q96PN6 1610 aa8.38□□□□□ -1.07
CTNND1-218ENST00000528232 LUZP1Q86V48 1076 aa8.38□□□□□ -1.07
CTNND1-218ENST00000528232 IPO4Q8TEX9 1081 aaKnown RBP8.38□□□□□ -1.07
CTNND1-218ENST00000528232 ZRANB1Q9UGI0 708 aa8.38□□□□□ -1.07
CTNND1-218ENST00000528232 TTC37Q6PGP7 1564 aa8.38□□□□□ -1.07
CTNND1-218ENST00000528232 KRT222Q8N1A0 295 aa8.38□□□□□ -1.07
CTNND1-218ENST00000528232 ZFYVE16Q7Z3T8 1539 aa8.38□□□□□ -1.07
CTNND1-218ENST00000528232 MSH6P52701 1360 aa8.38□□□□□ -1.07
CTNND1-218ENST00000528232 CCDC196A0A1B0GTZ2 297 aa8.38□□□□□ -1.07
CTNND1-218ENST00000528232 CTAGE5O15320 804 aa8.38□□□□□ -1.07
CTNND1-218ENST00000528232 RLBP1P12271 317 aa8.38□□□□□ -1.07
CTNND1-218ENST00000528232 TRMT112Q9UI30 125 aaKnown RBP8.38□□□□□ -1.07
CTNND1-218ENST00000528232 ERICH4A6NGS2 130 aa8.37□□□□□ -1.07
CTNND1-218ENST00000528232 OFD1O75665 1012 aa8.37□□□□□ -1.07
CTNND1-218ENST00000528232 BAG4O95429 457 aaKnown RBP8.37□□□□□ -1.07
CTNND1-218ENST00000528232 GJB2P29033 226 aa8.37□□□□□ -1.07
CTNND1-218ENST00000528232 DCTPP1Q9H773 170 aa8.37□□□□□ -1.07
CTNND1-218ENST00000528232 ZNHIT6Q9NWK9 470 aaKnown RBP8.37□□□□□ -1.07
CTNND1-218ENST00000528232 CPSF2Q9P2I0 782 aaKnown RBP8.37□□□□□ -1.07
CTNND1-218ENST00000528232 FAM193AP78312 1265 aa8.37□□□□□ -1.07
CTNND1-218ENST00000528232 SARNPP82979 210 aaKnown RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms