RNA–Protein interactions for RNA: ENST00000527817.1

SRPRA-202, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 687 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-202ENST00000527817 ITGBL1O95965 494 aaPredicted RBP16.64■□□□□ 0.25
SRPRA-202ENST00000527817 A1BGP04217 495 aa16.64■□□□□ 0.25
SRPRA-202ENST00000527817 CTCFP49711 727 aaPredicted RBP16.64■□□□□ 0.25
SRPRA-202ENST00000527817 TMEM88BA6NKF7 163 aa16.63■□□□□ 0.25
SRPRA-202ENST00000527817 GNAT3A8MTJ3 354 aa16.63■□□□□ 0.25
SRPRA-202ENST00000527817 NPHP1O15259 732 aa16.63■□□□□ 0.25
SRPRA-202ENST00000527817 VEGFBP49765 207 aa16.63■□□□□ 0.25
SRPRA-202ENST00000527817 AIDAQ96BJ3 306 aa16.63■□□□□ 0.25
SRPRA-202ENST00000527817 FMNL2Q96PY5 1086 aa16.63■□□□□ 0.25
SRPRA-202ENST00000527817 ZNF330Q9Y3S2 320 aaPredicted RBP16.63■□□□□ 0.25
SRPRA-202ENST00000527817 KLRG2A4D1S0 409 aaPredicted RBP16.62■□□□□ 0.25
SRPRA-202ENST00000527817 CLEC4GQ6UXB4 293 aa16.62■□□□□ 0.25
SRPRA-202ENST00000527817 WBP1LQ9NX94 342 aa16.62■□□□□ 0.25
SRPRA-202ENST00000527817 SCN4AP35499 1836 aa16.61■□□□□ 0.25
SRPRA-202ENST00000527817 DZIP3Q86Y13 1208 aaKnown RBP16.61■□□□□ 0.25
SRPRA-202ENST00000527817 GAS2L2Q8NHY3 880 aa16.61■□□□□ 0.25
SRPRA-202ENST00000527817 COL11A2P13942 1736 aaPredicted RBP16.6■□□□□ 0.25
SRPRA-202ENST00000527817 PER1O15534 1290 aaPredicted RBP16.6■□□□□ 0.25
SRPRA-202ENST00000527817 NPR1P16066 1061 aa16.6■□□□□ 0.25
SRPRA-202ENST00000527817 CCDC93Q567U6 631 aa16.6■□□□□ 0.25
SRPRA-202ENST00000527817 HACL1Q9UJ83 578 aa16.6■□□□□ 0.25
SRPRA-202ENST00000527817 FKBP4Q02790 459 aaKnown RBP eCLIP16.59■□□□□ 0.25
SRPRA-202ENST00000527817 NBPF5PQ86XG9 351 aaPredicted RBP16.59■□□□□ 0.25
SRPRA-202ENST00000527817 USP16Q9Y5T5 823 aa16.59■□□□□ 0.25
SRPRA-202ENST00000527817 SCN7AQ01118 1682 aa16.59■□□□□ 0.25
SRPRA-202ENST00000527817 RASSF10A6NK89 507 aa16.58■□□□□ 0.24
SRPRA-202ENST00000527817 DEFB115Q30KQ5 88 aa16.58■□□□□ 0.24
SRPRA-202ENST00000527817 EAPPQ56P03 285 aaPredicted RBP16.58■□□□□ 0.24
SRPRA-202ENST00000527817 PNMA8AQ86V59 439 aaPredicted RBP16.58■□□□□ 0.24
SRPRA-202ENST00000527817 RTKN2Q8IZC4 609 aa16.58■□□□□ 0.24
SRPRA-202ENST00000527817 CLEC11AQ9Y240 323 aa16.58■□□□□ 0.24
SRPRA-202ENST00000527817 CEMIPQ8WUJ3 1361 aa16.57■□□□□ 0.24
SRPRA-202ENST00000527817 BTBD11A6QL63 1104 aa16.57■□□□□ 0.24
SRPRA-202ENST00000527817 RGL2O15211 777 aa16.57■□□□□ 0.24
SRPRA-202ENST00000527817 KCNQ3O43525 872 aa16.57■□□□□ 0.24
SRPRA-202ENST00000527817 EPHX2P34913 555 aa16.57■□□□□ 0.24
SRPRA-202ENST00000527817 LBX1P52954 281 aa16.57■□□□□ 0.24
SRPRA-202ENST00000527817 TPTE2Q6XPS3 522 aa16.57■□□□□ 0.24
SRPRA-202ENST00000527817 CNTROBQ8N137 903 aa16.57■□□□□ 0.24
SRPRA-202ENST00000527817 ZNF277Q9NRM2 450 aaPredicted RBP16.57■□□□□ 0.24
SRPRA-202ENST00000527817 FZD9O00144 591 aa16.56■□□□□ 0.24
SRPRA-202ENST00000527817 ZNF652Q9Y2D9 606 aa16.56■□□□□ 0.24
SRPRA-202ENST00000527817 ARFGEF2Q9Y6D5 1785 aa16.56■□□□□ 0.24
SRPRA-202ENST00000527817 ZNF541Q9H0D2 1346 aa16.55■□□□□ 0.24
SRPRA-202ENST00000527817 U2SURPO15042 1029 aaKnown RBP16.55■□□□□ 0.24
SRPRA-202ENST00000527817 ALDH1B1P30837 517 aa16.55■□□□□ 0.24
SRPRA-202ENST00000527817 MAP2K1Q02750 393 aaPredicted RBP16.55■□□□□ 0.24
SRPRA-202ENST00000527817 SIPA1L3O60292 1781 aaPredicted RBP16.54■□□□□ 0.24
SRPRA-202ENST00000527817 SNRPA1P09661 255 aaKnown RBP16.54■□□□□ 0.24
SRPRA-202ENST00000527817 CC2D1BQ5T0F9 858 aaKnown RBP16.54■□□□□ 0.24
SRPRA-202ENST00000527817 SYNE4Q8N205 404 aa16.54■□□□□ 0.24
SRPRA-202ENST00000527817 PCGF6Q9BYE7 350 aa16.54■□□□□ 0.24
SRPRA-202ENST00000527817 CACNA1SQ13698 1873 aa16.54■□□□□ 0.24
SRPRA-202ENST00000527817 WDR33Q9C0J8 1336 aaKnown RBP16.53■□□□□ 0.24
SRPRA-202ENST00000527817 HSPA8P11142 646 aaKnown RBP16.53■□□□□ 0.24
SRPRA-202ENST00000527817 IARSP41252 1262 aaKnown RBP16.53■□□□□ 0.24
SRPRA-202ENST00000527817 MAP1SQ66K74 1059 aaPredicted RBP16.53■□□□□ 0.24
SRPRA-202ENST00000527817 OLFM4Q6UX06 510 aa16.53■□□□□ 0.24
SRPRA-202ENST00000527817 GPC2Q8N158 579 aa16.53■□□□□ 0.24
SRPRA-202ENST00000527817 NIP7Q9Y221 180 aaKnown RBP eCLIP16.53■□□□□ 0.24
SRPRA-202ENST00000527817 KIF7Q2M1P5 1343 aa16.52■□□□□ 0.24
SRPRA-202ENST00000527817 PIP4K2AP48426 406 aaPredicted RBP16.52■□□□□ 0.24
SRPRA-202ENST00000527817 ABHD8Q96I13 439 aa16.52■□□□□ 0.24
SRPRA-202ENST00000527817 PHACTR3Q96KR7 559 aa16.52■□□□□ 0.24
SRPRA-202ENST00000527817 PSMD1Q99460 953 aa16.52■□□□□ 0.24
SRPRA-202ENST00000527817 RNF123Q5XPI4 1314 aa16.51■□□□□ 0.23
SRPRA-202ENST00000527817 PRAMEF22A3QJZ6 481 aa16.51■□□□□ 0.23
SRPRA-202ENST00000527817 JDP2Q8WYK2 163 aa16.51■□□□□ 0.23
SRPRA-202ENST00000527817 BCORQ6W2J9 1755 aa16.51■□□□□ 0.23
SRPRA-202ENST00000527817 ADAMTSL1Q8N6G6 1762 aa16.51■□□□□ 0.23
SRPRA-202ENST00000527817 COL3A1P02461 1466 aaPredicted RBP16.5■□□□□ 0.23
SRPRA-202ENST00000527817 SLC34A2O95436 690 aa16.5■□□□□ 0.23
SRPRA-202ENST00000527817 CC2D2BQ6DHV5 1058 aa16.5■□□□□ 0.23
SRPRA-202ENST00000527817 DDX21Q9NR30 783 aaKnown RBP eCLIP16.5■□□□□ 0.233e-7■□□□□ 11
SRPRA-202ENST00000527817 NPC1L1Q9UHC9 1359 aa16.5■□□□□ 0.23
SRPRA-202ENST00000527817 NBPF26B4DH59 902 aa16.49■□□□□ 0.23
SRPRA-202ENST00000527817 NBPF10Q6P3W6 841 aaKnown RBP16.49■□□□□ 0.23
SRPRA-202ENST00000527817 NBPF15Q8N660 670 aa16.49■□□□□ 0.23
SRPRA-202ENST00000527817 ABT1Q9ULW3 272 aaKnown RBP16.49■□□□□ 0.23
SRPRA-202ENST00000527817 GTF2E1P29083 439 aaPredicted RBP16.48■□□□□ 0.23
SRPRA-202ENST00000527817 EIF6P56537 245 aaKnown RBP16.48■□□□□ 0.23
SRPRA-202ENST00000527817 HLFQ16534 295 aa16.48■□□□□ 0.23
SRPRA-202ENST00000527817 CRY2Q49AN0 593 aa16.48■□□□□ 0.23
SRPRA-202ENST00000527817 GRIPAP1Q4V328 841 aa16.48■□□□□ 0.23
SRPRA-202ENST00000527817 RSPH6AQ9H0K4 717 aa16.48■□□□□ 0.23
SRPRA-202ENST00000527817 FAM177BA6PVY3 158 aa16.47■□□□□ 0.23
SRPRA-202ENST00000527817 PRKAR2BP31323 418 aa16.47■□□□□ 0.23
SRPRA-202ENST00000527817 ECE1P42892 770 aa16.47■□□□□ 0.23
SRPRA-202ENST00000527817 LMOD1P29536 600 aaPredicted RBP16.46■□□□□ 0.23
SRPRA-202ENST00000527817 RGS19P49795 217 aa16.46■□□□□ 0.23
SRPRA-202ENST00000527817 RTF1Q92541 710 aaKnown RBP16.46■□□□□ 0.23
SRPRA-202ENST00000527817 NYXQ9GZU5 481 aa16.46■□□□□ 0.23
SRPRA-202ENST00000527817 SNED1Q8TER0 1413 aa16.45■□□□□ 0.22
SRPRA-202ENST00000527817 HTATSF1O43719 755 aaKnown RBP16.45■□□□□ 0.22
SRPRA-202ENST00000527817 HOXA10P31260 410 aaPredicted RBP16.45■□□□□ 0.22
SRPRA-202ENST00000527817 FAM161AQ3B820 660 aa16.45■□□□□ 0.22
SRPRA-202ENST00000527817 USP50Q70EL3 339 aaPredicted RBP16.45■□□□□ 0.22
SRPRA-202ENST00000527817 CAPNS2Q96L46 248 aa16.45■□□□□ 0.22
SRPRA-202ENST00000527817 GPR101Q96P66 508 aaPredicted RBP16.45■□□□□ 0.22
SRPRA-202ENST00000527817 BEGAINQ9BUH8 593 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms