RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 GLMNQ92990 594 aa8.22□□□□□ -1.09
CSDE1-211ENST00000525970 L3MBTL2Q969R5 705 aa8.22□□□□□ -1.09
CSDE1-211ENST00000525970 EML1O00423 815 aa8.21□□□□□ -1.1
CSDE1-211ENST00000525970 TXLNAP40222 546 aa8.21□□□□□ -1.1
CSDE1-211ENST00000525970 EPHA4P54764 986 aa8.21□□□□□ -1.1
CSDE1-211ENST00000525970 PCBP4P57723 403 aaKnown RBP8.21□□□□□ -1.1
CSDE1-211ENST00000525970 CD163Q86VB7 1156 aa8.21□□□□□ -1.1
CSDE1-211ENST00000525970 TRIM50Q86XT4 487 aa8.21□□□□□ -1.1
CSDE1-211ENST00000525970 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.21□□□□□ -1.1
CSDE1-211ENST00000525970 ZDHHC1Q8WTX9 485 aa8.21□□□□□ -1.1
CSDE1-211ENST00000525970 SERPINA10Q9UK55 444 aa8.21□□□□□ -1.1
CSDE1-211ENST00000525970 PARP3Q9Y6F1 533 aa8.21□□□□□ -1.1
CSDE1-211ENST00000525970 USP17L5A8MUK1 530 aa8.2□□□□□ -1.1
CSDE1-211ENST00000525970 NOS2P35228 1153 aa8.2□□□□□ -1.1
CSDE1-211ENST00000525970 ELOA3CA0A087WX78 387 aaPredicted RBP8.19□□□□□ -1.1
CSDE1-211ENST00000525970 ELOA3DA6NLF2 546 aaPredicted RBP8.19□□□□□ -1.1
CSDE1-211ENST00000525970 FURINP09958 794 aa8.19□□□□□ -1.1
CSDE1-211ENST00000525970 ELOA3BQ3SY89 546 aa8.19□□□□□ -1.1
CSDE1-211ENST00000525970 XP32Q5T750 250 aa8.19□□□□□ -1.1
CSDE1-211ENST00000525970 SLC9A9Q8IVB4 645 aa8.19□□□□□ -1.1
CSDE1-211ENST00000525970 ELOA3Q8NG57 546 aa8.19□□□□□ -1.1
CSDE1-211ENST00000525970 STRN4Q9NRL3 753 aa8.19□□□□□ -1.1
CSDE1-211ENST00000525970 SPDYE3A6NKU9 549 aa8.18□□□□□ -1.1
CSDE1-211ENST00000525970 SIN3BO75182 1162 aa8.18□□□□□ -1.1
CSDE1-211ENST00000525970 ALAS2P22557 587 aa8.18□□□□□ -1.1
CSDE1-211ENST00000525970 CHRNA4P43681 627 aa8.18□□□□□ -1.1
CSDE1-211ENST00000525970 ATP1A2P50993 1020 aa8.18□□□□□ -1.1
CSDE1-211ENST00000525970 PLEKHM2Q8IWE5 1019 aa8.18□□□□□ -1.1
CSDE1-211ENST00000525970 TRIM11Q96F44 468 aa8.18□□□□□ -1.1
CSDE1-211ENST00000525970 MDFIQ99750 246 aa8.18□□□□□ -1.1
CSDE1-211ENST00000525970 TRAIPQ9BWF2 469 aa8.18□□□□□ -1.1
CSDE1-211ENST00000525970 NEUROD4Q9HD90 331 aa8.18□□□□□ -1.1
CSDE1-211ENST00000525970 SERTM1A2A2V5 107 aa8.17□□□□□ -1.1
CSDE1-211ENST00000525970 ADARB2-AS1A8MUL3 147 aa8.17□□□□□ -1.1
CSDE1-211ENST00000525970 SPATA31C1P0DKV0 1188 aa8.17□□□□□ -1.1
CSDE1-211ENST00000525970 LRRC69Q6ZNQ3 347 aa8.17□□□□□ -1.1
CSDE1-211ENST00000525970 SYT9Q86SS6 491 aa8.17□□□□□ -1.1
CSDE1-211ENST00000525970 C7orf43Q8WVR3 580 aa8.17□□□□□ -1.1
CSDE1-211ENST00000525970 PLVAPQ9BX97 442 aa8.17□□□□□ -1.1
CSDE1-211ENST00000525970 ZNF232Q9UNY5 417 aa8.17□□□□□ -1.1
CSDE1-211ENST00000525970 PSMA6P60900 246 aaKnown RBP8.16□□□□□ -1.1
CSDE1-211ENST00000525970 C1orf53Q5VUE5 145 aa8.16□□□□□ -1.1
CSDE1-211ENST00000525970 TNS4Q8IZW8 715 aa8.16□□□□□ -1.1
CSDE1-211ENST00000525970 CCDC97Q96F63 343 aaPredicted RBP8.16□□□□□ -1.1
CSDE1-211ENST00000525970 M0R2N6 131 aa8.15□□□□□ -1.1
CSDE1-211ENST00000525970 HIRAP54198 1017 aaPredicted RBP8.15□□□□□ -1.1
CSDE1-211ENST00000525970 DEPDC4Q8N2C3 294 aa8.15□□□□□ -1.1
CSDE1-211ENST00000525970 TPCN2Q8NHX9 752 aa8.15□□□□□ -1.1
CSDE1-211ENST00000525970 RHPN1Q8TCX5 695 aa8.15□□□□□ -1.1
CSDE1-211ENST00000525970 UCN2Q96RP3 112 aa8.15□□□□□ -1.1
CSDE1-211ENST00000525970 ZBTB7CA1YPR0 619 aa8.14□□□□□ -1.11
CSDE1-211ENST00000525970 NEUROD1Q13562 356 aa8.14□□□□□ -1.11
CSDE1-211ENST00000525970 CCDC102BQ68D86 513 aa8.14□□□□□ -1.11
CSDE1-211ENST00000525970 POTEAQ6S8J7 498 aa8.14□□□□□ -1.11
CSDE1-211ENST00000525970 TNFRSF25Q93038 417 aa8.14□□□□□ -1.11
CSDE1-211ENST00000525970 PRDM6Q9NQX0 595 aa8.14□□□□□ -1.11
CSDE1-211ENST00000525970 ANKIB1Q9P2G1 1089 aa8.14□□□□□ -1.11
CSDE1-211ENST00000525970 TFIP11Q9UBB9 837 aaKnown RBP8.14□□□□□ -1.11
CSDE1-211ENST00000525970 CHMP3Q9Y3E7 222 aa8.14□□□□□ -1.11
CSDE1-211ENST00000525970 USP17L3A6NCW0 530 aa8.13□□□□□ -1.11
CSDE1-211ENST00000525970 USP17L4A6NCW7 530 aa8.13□□□□□ -1.11
CSDE1-211ENST00000525970 ZBTB7BO15156 539 aaPredicted RBP8.13□□□□□ -1.11
CSDE1-211ENST00000525970 ATP9BO43861 1147 aa8.13□□□□□ -1.11
CSDE1-211ENST00000525970 GATA4P43694 442 aa8.13□□□□□ -1.11
CSDE1-211ENST00000525970 PRRT3Q5FWE3 981 aa8.13□□□□□ -1.11
CSDE1-211ENST00000525970 TBCELQ5QJ74 424 aa8.13□□□□□ -1.11
CSDE1-211ENST00000525970 USP17L2Q6R6M4 530 aa8.13□□□□□ -1.11
CSDE1-211ENST00000525970 USP17L1Q7RTZ2 530 aa8.13□□□□□ -1.11
CSDE1-211ENST00000525970 LARGE2Q8N3Y3 721 aa8.13□□□□□ -1.11
CSDE1-211ENST00000525970 PALM3A6NDB9 673 aaPredicted RBP8.12□□□□□ -1.11
CSDE1-211ENST00000525970 KCNQ4P56696 695 aa8.12□□□□□ -1.11
CSDE1-211ENST00000525970 SFSWAPQ12872 951 aaKnown RBP8.12□□□□□ -1.11
CSDE1-211ENST00000525970 PPP1R12CQ9BZL4 782 aa8.12□□□□□ -1.11
CSDE1-211ENST00000525970 KIAA1024Q9UPX6 916 aa8.12□□□□□ -1.11
CSDE1-211ENST00000525970 SPEM2Q0P670 501 aa8.11□□□□□ -1.11
CSDE1-211ENST00000525970 Q8N3U1 123 aa8.11□□□□□ -1.11
CSDE1-211ENST00000525970 SLC30A3Q99726 388 aa8.11□□□□□ -1.11
CSDE1-211ENST00000525970 LMOD1P29536 600 aaPredicted RBP8.1□□□□□ -1.11
CSDE1-211ENST00000525970 CLDN10P78369 228 aa8.1□□□□□ -1.11
CSDE1-211ENST00000525970 SH3PXD2AQ5TCZ1 1133 aa8.1□□□□□ -1.11
CSDE1-211ENST00000525970 SIX5Q8N196 739 aa8.1□□□□□ -1.11
CSDE1-211ENST00000525970 TSPAN10Q9H1Z9 355 aaPredicted RBP8.1□□□□□ -1.11
CSDE1-211ENST00000525970 BRD7Q9NPI1 651 aa8.1□□□□□ -1.11
CSDE1-211ENST00000525970 M0R082 166 aa8.09□□□□□ -1.11
CSDE1-211ENST00000525970 APBA3O96018 575 aa8.09□□□□□ -1.11
CSDE1-211ENST00000525970 DOC2BQ14184 412 aa8.09□□□□□ -1.11
CSDE1-211ENST00000525970 HIF1AQ16665 826 aa8.09□□□□□ -1.11
CSDE1-211ENST00000525970 OGFOD1Q8N543 542 aa8.09□□□□□ -1.11
CSDE1-211ENST00000525970 ZNF417Q8TAU3 575 aa8.09□□□□□ -1.11
CSDE1-211ENST00000525970 CEP63Q96MT8 703 aa8.09□□□□□ -1.11
CSDE1-211ENST00000525970 ZNF587Q96SQ5 575 aaPredicted RBP8.09□□□□□ -1.11
CSDE1-211ENST00000525970 PHACTR1Q9C0D0 580 aa8.09□□□□□ -1.11
CSDE1-211ENST00000525970 KCNH4Q9UQ05 1017 aa8.09□□□□□ -1.11
CSDE1-211ENST00000525970 RBM19Q9Y4C8 960 aaKnown RBP8.09□□□□□ -1.11
CSDE1-211ENST00000525970 MAFBQ9Y5Q3 323 aaPredicted RBP8.09□□□□□ -1.11
CSDE1-211ENST00000525970 ADH7P40394 386 aa8.08□□□□□ -1.12
CSDE1-211ENST00000525970 RANGAP1P46060 587 aaPredicted RBP8.08□□□□□ -1.12
CSDE1-211ENST00000525970 COL9A3Q14050 684 aaPredicted RBP8.08□□□□□ -1.12
CSDE1-211ENST00000525970 NPM2Q86SE8 214 aaKnown RBP8.08□□□□□ -1.12
CSDE1-211ENST00000525970 MICALL1Q8N3F8 863 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms