RNA–Protein interactions for RNA: ENST00000522854.5

CSGALNACT1-211, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 1,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-211ENST00000522854 RGS3P49796 1198 aa18.92■□□□□ 0.62
CSGALNACT1-211ENST00000522854 KRT27Q7Z3Y8 459 aa18.92■□□□□ 0.62
CSGALNACT1-211ENST00000522854 NUP188Q5SRE5 1749 aa18.91■□□□□ 0.62
CSGALNACT1-211ENST00000522854 AFDNP55196 1824 aaKnown RBP18.91■□□□□ 0.62
CSGALNACT1-211ENST00000522854 RBM6P78332 1123 aaKnown RBP18.91■□□□□ 0.62
CSGALNACT1-211ENST00000522854 METTL22Q9BUU2 404 aaPredicted RBP18.91■□□□□ 0.62
CSGALNACT1-211ENST00000522854 GNAI2P04899 355 aa18.9■□□□□ 0.62
CSGALNACT1-211ENST00000522854 UBTFL1P0CB47 393 aaPredicted RBP18.9■□□□□ 0.62
CSGALNACT1-211ENST00000522854 SMIM5Q71RC9 77 aa18.9■□□□□ 0.62
CSGALNACT1-211ENST00000522854 PELP1Q8IZL8 1130 aaKnown RBP18.9■□□□□ 0.62
CSGALNACT1-211ENST00000522854 PLBD2Q8NHP8 589 aa18.9■□□□□ 0.62
CSGALNACT1-211ENST00000522854 BCL11AQ9H165 835 aa18.9■□□□□ 0.62
CSGALNACT1-211ENST00000522854 CRKLP46109 303 aaKnown RBP18.9■□□□□ 0.62
CSGALNACT1-211ENST00000522854 INTS5Q6P9B9 1019 aaKnown RBP18.9■□□□□ 0.62
CSGALNACT1-211ENST00000522854 LINS1Q8NG48 757 aa18.9■□□□□ 0.62
CSGALNACT1-211ENST00000522854 PDZRN3Q9UPQ7 1066 aa18.9■□□□□ 0.62
CSGALNACT1-211ENST00000522854 NEURL1BA8MQ27 555 aa18.89■□□□□ 0.61
CSGALNACT1-211ENST00000522854 GNAI3P08754 354 aa18.89■□□□□ 0.61
CSGALNACT1-211ENST00000522854 ANKRD44Q8N8A2 993 aa18.89■□□□□ 0.61
CSGALNACT1-211ENST00000522854 PNMA6EA0A0J9YXQ4 647 aa18.88■□□□□ 0.61
CSGALNACT1-211ENST00000522854 POTEAQ6S8J7 498 aa18.88■□□□□ 0.61
CSGALNACT1-211ENST00000522854 LINC00116Q8NCU8 138 aa18.88■□□□□ 0.61
CSGALNACT1-211ENST00000522854 SMARCC1Q92922 1105 aaPredicted RBP18.88■□□□□ 0.61
CSGALNACT1-211ENST00000522854 C9orf78Q9NZ63 289 aaPredicted RBP18.88■□□□□ 0.61
CSGALNACT1-211ENST00000522854 NEXNQ0ZGT2 675 aa18.88■□□□□ 0.61
CSGALNACT1-211ENST00000522854 COL5A3P25940 1745 aaPredicted RBP18.87■□□□□ 0.61
CSGALNACT1-211ENST00000522854 TRIM37O94972 964 aa18.87■□□□□ 0.61
CSGALNACT1-211ENST00000522854 RTL5Q5HYW3 569 aaPredicted RBP18.87■□□□□ 0.61
CSGALNACT1-211ENST00000522854 TBC1D2BQ9UPU7 963 aa18.87■□□□□ 0.61
CSGALNACT1-211ENST00000522854 ALDH1L1O75891 902 aa18.86■□□□□ 0.61
CSGALNACT1-211ENST00000522854 HLFQ16534 295 aa18.86■□□□□ 0.61
CSGALNACT1-211ENST00000522854 SMC5Q8IY18 1101 aa18.86■□□□□ 0.61
CSGALNACT1-211ENST00000522854 APBB1O00213 710 aa18.86■□□□□ 0.61
CSGALNACT1-211ENST00000522854 RXRBP28702 533 aa18.86■□□□□ 0.61
CSGALNACT1-211ENST00000522854 GCKRQ14397 625 aa18.86■□□□□ 0.61
CSGALNACT1-211ENST00000522854 CCDC87Q9NVE4 849 aa18.86■□□□□ 0.61
CSGALNACT1-211ENST00000522854 GRM8O00222 908 aa18.85■□□□□ 0.61
CSGALNACT1-211ENST00000522854 RPAP2Q8IXW5 612 aaPredicted RBP18.85■□□□□ 0.61
CSGALNACT1-211ENST00000522854 KAZALD1Q96I82 304 aa18.84■□□□□ 0.61
CSGALNACT1-211ENST00000522854 SUCLG2Q96I99 432 aa18.84■□□□□ 0.61
CSGALNACT1-211ENST00000522854 KIF6Q6ZMV9 814 aa18.83■□□□□ 0.61
CSGALNACT1-211ENST00000522854 FAM196AQ6ZSG2 479 aa18.83■□□□□ 0.61
CSGALNACT1-211ENST00000522854 LNPKQ9C0E8 428 aa18.83■□□□□ 0.61
CSGALNACT1-211ENST00000522854 BCL11BQ9C0K0 894 aaPredicted RBP18.83■□□□□ 0.61
CSGALNACT1-211ENST00000522854 CCNL1Q9UK58 526 aaPredicted RBP18.83■□□□□ 0.61
CSGALNACT1-211ENST00000522854 LY75O60449 1722 aa18.83■□□□□ 0.6
CSGALNACT1-211ENST00000522854 CICQ96RK0 1608 aaPredicted RBP18.83■□□□□ 0.6
CSGALNACT1-211ENST00000522854 PDE4AP27815 886 aa18.82■□□□□ 0.6
CSGALNACT1-211ENST00000522854 IL6STP40189 918 aaPredicted RBP18.82■□□□□ 0.6
CSGALNACT1-211ENST00000522854 EIF5P55010 431 aaKnown RBP18.82■□□□□ 0.6
CSGALNACT1-211ENST00000522854 ANKRD45Q5TZF3 282 aa18.82■□□□□ 0.6
CSGALNACT1-211ENST00000522854 UBE3BQ7Z3V4 1068 aa18.82■□□□□ 0.6
CSGALNACT1-211ENST00000522854 PPP1R42Q7Z4L9 355 aa18.82■□□□□ 0.6
CSGALNACT1-211ENST00000522854 GPTP24298 496 aa18.82■□□□□ 0.6
CSGALNACT1-211ENST00000522854 ATP8B2P98198 1209 aa18.82■□□□□ 0.6
CSGALNACT1-211ENST00000522854 DZIP3Q86Y13 1208 aaKnown RBP18.82■□□□□ 0.6
CSGALNACT1-211ENST00000522854 EXOC6BQ9Y2D4 811 aa18.82■□□□□ 0.6
CSGALNACT1-211ENST00000522854 MAP3K15Q6ZN16 1313 aa18.82■□□□□ 0.6
CSGALNACT1-211ENST00000522854 RREB1Q92766 1687 aa18.82■□□□□ 0.6
CSGALNACT1-211ENST00000522854 A0A087WZG4 1122 aa18.81■□□□□ 0.6
CSGALNACT1-211ENST00000522854 EPHA10Q5JZY3 1008 aa18.81■□□□□ 0.6
CSGALNACT1-211ENST00000522854 AMIGO3Q86WK7 504 aa18.81■□□□□ 0.6
CSGALNACT1-211ENST00000522854 DCTPP1Q9H773 170 aa18.81■□□□□ 0.6
CSGALNACT1-211ENST00000522854 NUP98P52948 1817 aa18.81■□□□□ 0.6
CSGALNACT1-211ENST00000522854 BICC1Q9H694 974 aaKnown RBP18.81■□□□□ 0.6
CSGALNACT1-211ENST00000522854 LRRC4BQ9NT99 713 aa18.81■□□□□ 0.6
CSGALNACT1-211ENST00000522854 SRGAP3O43295 1099 aa18.8■□□□□ 0.6
CSGALNACT1-211ENST00000522854 SMARCA5O60264 1052 aaPredicted RBP18.8■□□□□ 0.6
CSGALNACT1-211ENST00000522854 NUCB1Q02818 461 aa18.8■□□□□ 0.6
CSGALNACT1-211ENST00000522854 TSHZ2Q9NRE2 1034 aa18.8■□□□□ 0.6
CSGALNACT1-211ENST00000522854 TAF1LQ8IZX4 1826 aa18.8■□□□□ 0.6
CSGALNACT1-211ENST00000522854 UTYO14607 1347 aa18.8■□□□□ 0.6
CSGALNACT1-211ENST00000522854 ZNF831Q5JPB2 1677 aa18.8■□□□□ 0.6
CSGALNACT1-211ENST00000522854 TCIRG1Q13488 830 aa18.79■□□□□ 0.6
CSGALNACT1-211ENST00000522854 GCC1Q96CN9 775 aa18.79■□□□□ 0.6
CSGALNACT1-211ENST00000522854 NPM2Q86SE8 214 aaKnown RBP18.79■□□□□ 0.6
CSGALNACT1-211ENST00000522854 CHD1LQ86WJ1 897 aa18.79■□□□□ 0.6
CSGALNACT1-211ENST00000522854 CWC25Q9NXE8 425 aaPredicted RBP18.79■□□□□ 0.6
CSGALNACT1-211ENST00000522854 GIGYF2Q6Y7W6 1299 aaKnown RBP18.78■□□□□ 0.6
CSGALNACT1-211ENST00000522854 SYNE4Q8N205 404 aa18.78■□□□□ 0.6
CSGALNACT1-211ENST00000522854 COL15A1P39059 1388 aa18.78■□□□□ 0.6
CSGALNACT1-211ENST00000522854 HMMRO75330 724 aa18.77■□□□□ 0.6
CSGALNACT1-211ENST00000522854 CASP7P55210 303 aa18.77■□□□□ 0.6
CSGALNACT1-211ENST00000522854 ISCA1Q9BUE6 129 aa18.77■□□□□ 0.6
CSGALNACT1-211ENST00000522854 C16orf71Q8IYS4 520 aaPredicted RBP18.77■□□□□ 0.59
CSGALNACT1-211ENST00000522854 GNPATO15228 680 aa18.76■□□□□ 0.59
CSGALNACT1-211ENST00000522854 SSH3Q8TE77 659 aa18.76■□□□□ 0.59
CSGALNACT1-211ENST00000522854 PA2G4Q9UQ80 394 aaKnown RBP18.76■□□□□ 0.59
CSGALNACT1-211ENST00000522854 ANKRD36CQ5JPF3 1778 aa18.76■□□□□ 0.59
CSGALNACT1-211ENST00000522854 POLA2Q14181 598 aa18.75■□□□□ 0.59
CSGALNACT1-211ENST00000522854 KLHDC4Q8TBB5 520 aa18.75■□□□□ 0.59
CSGALNACT1-211ENST00000522854 OTUD7AQ8TE49 926 aaPredicted RBP18.75■□□□□ 0.59
CSGALNACT1-211ENST00000522854 FAM89AQ96GI7 184 aa18.75■□□□□ 0.59
CSGALNACT1-211ENST00000522854 UBN2Q6ZU65 1347 aa18.75■□□□□ 0.59
CSGALNACT1-211ENST00000522854 CNTNAP4Q9C0A0 1308 aa18.75■□□□□ 0.59
CSGALNACT1-211ENST00000522854 FAM177BA6PVY3 158 aa18.75■□□□□ 0.59
CSGALNACT1-211ENST00000522854 CAMTA2O94983 1202 aa18.75■□□□□ 0.59
CSGALNACT1-211ENST00000522854 CCDC191Q8NCU4 936 aa18.75■□□□□ 0.59
CSGALNACT1-211ENST00000522854 H7C1W4 665 aa18.74■□□□□ 0.59
CSGALNACT1-211ENST00000522854 C4BP0C0L5 1744 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms