RNA–Protein interactions for RNA: ENST00000522792.1

CTNNA1-236, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-236ENST00000522792 KCNA4P22459 653 aa19.31■□□□□ 0.68
CTNNA1-236ENST00000522792 PTF1AQ7RTS3 328 aa19.31■□□□□ 0.68
CTNNA1-236ENST00000522792 C9orf78Q9NZ63 289 aaPredicted RBP19.31■□□□□ 0.68
CTNNA1-236ENST00000522792 ONECUT3O60422 494 aaPredicted RBP19.3■□□□□ 0.68
CTNNA1-236ENST00000522792 ZBTB3Q9H5J0 574 aa19.3■□□□□ 0.68
CTNNA1-236ENST00000522792 NUCB1Q02818 461 aa19.3■□□□□ 0.68
CTNNA1-236ENST00000522792 ANKRD45Q5TZF3 282 aa19.3■□□□□ 0.68
CTNNA1-236ENST00000522792 LOC102724428A0A0B4J2F2 783 aa19.29■□□□□ 0.68
CTNNA1-236ENST00000522792 NEURL1BA8MQ27 555 aa19.29■□□□□ 0.68
CTNNA1-236ENST00000522792 ATP6V1AP38606 617 aa19.29■□□□□ 0.68
CTNNA1-236ENST00000522792 SIK1P57059 783 aa19.29■□□□□ 0.68
CTNNA1-236ENST00000522792 LNPKQ9C0E8 428 aa19.29■□□□□ 0.68
CTNNA1-236ENST00000522792 PNMA6EA0A0J9YXQ4 647 aa19.29■□□□□ 0.68
CTNNA1-236ENST00000522792 ATP5J2-PTCD1G3V325 749 aa19.29■□□□□ 0.68
CTNNA1-236ENST00000522792 HMMRO75330 724 aa19.29■□□□□ 0.68
CTNNA1-236ENST00000522792 PDE4AP27815 886 aa19.29■□□□□ 0.68
CTNNA1-236ENST00000522792 DCTPP1Q9H773 170 aa19.29■□□□□ 0.68
CTNNA1-236ENST00000522792 ZBTB1Q9Y2K1 713 aa19.29■□□□□ 0.68
CTNNA1-236ENST00000522792 NUP188Q5SRE5 1749 aa19.29■□□□□ 0.68
CTNNA1-236ENST00000522792 GRM8O00222 908 aa19.28■□□□□ 0.68
CTNNA1-236ENST00000522792 ATP8B2P98198 1209 aa19.28■□□□□ 0.68
CTNNA1-236ENST00000522792 CHD1LQ86WJ1 897 aa19.28■□□□□ 0.68
CTNNA1-236ENST00000522792 SMARCC1Q92922 1105 aaPredicted RBP19.28■□□□□ 0.68
CTNNA1-236ENST00000522792 ARXQ96QS3 562 aa19.27■□□□□ 0.68
CTNNA1-236ENST00000522792 AFDNP55196 1824 aaKnown RBP19.27■□□□□ 0.68
CTNNA1-236ENST00000522792 ITPK1Q13572 414 aa19.27■□□□□ 0.67
CTNNA1-236ENST00000522792 GCKRQ14397 625 aa19.27■□□□□ 0.67
CTNNA1-236ENST00000522792 NHSQ6T4R5 1651 aa19.27■□□□□ 0.67
CTNNA1-236ENST00000522792 APBB1O00213 710 aa19.26■□□□□ 0.67
CTNNA1-236ENST00000522792 BCL11AQ9H165 835 aa19.26■□□□□ 0.67
CTNNA1-236ENST00000522792 BTAF1O14981 1849 aa19.25■□□□□ 0.67
CTNNA1-236ENST00000522792 KIF6Q6ZMV9 814 aa19.25■□□□□ 0.67
CTNNA1-236ENST00000522792 JARID2Q92833 1246 aaPredicted RBP19.25■□□□□ 0.67
CTNNA1-236ENST00000522792 UTYO14607 1347 aa19.24■□□□□ 0.67
CTNNA1-236ENST00000522792 PPP1R42Q7Z4L9 355 aa19.24■□□□□ 0.67
CTNNA1-236ENST00000522792 SUCLG2Q96I99 432 aa19.24■□□□□ 0.67
CTNNA1-236ENST00000522792 KCNQ4P56696 695 aa19.24■□□□□ 0.67
CTNNA1-236ENST00000522792 CRKLP46109 303 aaKnown RBP19.23■□□□□ 0.67
CTNNA1-236ENST00000522792 INTS5Q6P9B9 1019 aaKnown RBP19.23■□□□□ 0.67
CTNNA1-236ENST00000522792 CCDC87Q9NVE4 849 aa19.23■□□□□ 0.67
CTNNA1-236ENST00000522792 EXOC6BQ9Y2D4 811 aa19.23■□□□□ 0.67
CTNNA1-236ENST00000522792 SRGAP3O43295 1099 aa19.22■□□□□ 0.67
CTNNA1-236ENST00000522792 ZNF772Q68DY9 489 aaPredicted RBP19.22■□□□□ 0.67
CTNNA1-236ENST00000522792 CICQ96RK0 1608 aaPredicted RBP19.22■□□□□ 0.67
CTNNA1-236ENST00000522792 RBM19Q9Y4C8 960 aaKnown RBP19.22■□□□□ 0.67
CTNNA1-236ENST00000522792 A0A087WZG4 1122 aa19.21■□□□□ 0.67
CTNNA1-236ENST00000522792 SMARCA5O60264 1052 aaPredicted RBP19.21■□□□□ 0.67
CTNNA1-236ENST00000522792 IL6STP40189 918 aaPredicted RBP19.21■□□□□ 0.67
CTNNA1-236ENST00000522792 UBE3BQ7Z3V4 1068 aa19.21■□□□□ 0.67
CTNNA1-236ENST00000522792 SSH3Q8TE77 659 aa19.21■□□□□ 0.67
CTNNA1-236ENST00000522792 KAZALD1Q96I82 304 aa19.21■□□□□ 0.67
CTNNA1-236ENST00000522792 BRWD3Q6RI45 1802 aa19.21■□□□□ 0.67
CTNNA1-236ENST00000522792 SBF2Q86WG5 1849 aa19.21■□□□□ 0.67
CTNNA1-236ENST00000522792 IBTKQ9P2D0 1353 aaPredicted RBP19.21■□□□□ 0.67
CTNNA1-236ENST00000522792 MAP3K15Q6ZN16 1313 aa19.21■□□□□ 0.67
CTNNA1-236ENST00000522792 POLA2Q14181 598 aa19.2■□□□□ 0.66
CTNNA1-236ENST00000522792 BICC1Q9H694 974 aaKnown RBP19.2■□□□□ 0.66
CTNNA1-236ENST00000522792 ZBTB47Q9UFB7 747 aaPredicted RBP19.2■□□□□ 0.66
CTNNA1-236ENST00000522792 HDAC5Q9UQL6 1122 aa19.2■□□□□ 0.66
CTNNA1-236ENST00000522792 NPM2Q86SE8 214 aaKnown RBP19.2■□□□□ 0.66
CTNNA1-236ENST00000522792 CWC25Q9NXE8 425 aaPredicted RBP19.2■□□□□ 0.66
CTNNA1-236ENST00000522792 TBC1D2BQ9UPU7 963 aa19.2■□□□□ 0.66
CTNNA1-236ENST00000522792 COL5A3P25940 1745 aaPredicted RBP19.19■□□□□ 0.66
CTNNA1-236ENST00000522792 HLFQ16534 295 aa19.19■□□□□ 0.66
CTNNA1-236ENST00000522792 KRT27Q7Z3Y8 459 aa19.19■□□□□ 0.66
CTNNA1-236ENST00000522792 LINC00116Q8NCU8 138 aa19.19■□□□□ 0.66
CTNNA1-236ENST00000522792 BACH2Q9BYV9 841 aa19.19■□□□□ 0.66
CTNNA1-236ENST00000522792 RREB1Q92766 1687 aa19.19■□□□□ 0.66
CTNNA1-236ENST00000522792 RBM6P78332 1123 aaKnown RBP19.18■□□□□ 0.66
CTNNA1-236ENST00000522792 TCIRG1Q13488 830 aa19.18■□□□□ 0.66
CTNNA1-236ENST00000522792 RTL5Q5HYW3 569 aaPredicted RBP19.18■□□□□ 0.66
CTNNA1-236ENST00000522792 DZIP3Q86Y13 1208 aaKnown RBP19.18■□□□□ 0.66
CTNNA1-236ENST00000522792 EIF5P55010 431 aaKnown RBP19.18■□□□□ 0.66
CTNNA1-236ENST00000522792 MTX1Q13505 466 aa19.18■□□□□ 0.66
CTNNA1-236ENST00000522792 FAM161AQ3B820 660 aa19.18■□□□□ 0.66
CTNNA1-236ENST00000522792 EPHA10Q5JZY3 1008 aa19.18■□□□□ 0.66
CTNNA1-236ENST00000522792 C16orf71Q8IYS4 520 aaPredicted RBP19.18■□□□□ 0.66
CTNNA1-236ENST00000522792 ZNF831Q5JPB2 1677 aa19.18■□□□□ 0.66
CTNNA1-236ENST00000522792 C8orf34Q49A92 452 aa19.17■□□□□ 0.66
CTNNA1-236ENST00000522792 CCDC191Q8NCU4 936 aa19.17■□□□□ 0.66
CTNNA1-236ENST00000522792 CNKSR2Q8WXI2 1034 aa19.17■□□□□ 0.66
CTNNA1-236ENST00000522792 ISCA1Q9BUE6 129 aa19.17■□□□□ 0.66
CTNNA1-236ENST00000522792 MYH14Q7Z406 1995 aaKnown RBP19.17■□□□□ 0.66
CTNNA1-236ENST00000522792 SURF6O75683 361 aaKnown RBP19.17■□□□□ 0.66
CTNNA1-236ENST00000522792 GIGYF2Q6Y7W6 1299 aaKnown RBP19.17■□□□□ 0.66
CTNNA1-236ENST00000522792 CASP7P55210 303 aa19.16■□□□□ 0.66
CTNNA1-236ENST00000522792 H7C1W4 665 aa19.15■□□□□ 0.66
CTNNA1-236ENST00000522792 GPTP24298 496 aa19.15■□□□□ 0.66
CTNNA1-236ENST00000522792 OTUD7AQ8TE49 926 aaPredicted RBP19.15■□□□□ 0.66
CTNNA1-236ENST00000522792 FBXO41Q8TF61 875 aa19.15■□□□□ 0.66
CTNNA1-236ENST00000522792 CCNL1Q9UK58 526 aaPredicted RBP19.15■□□□□ 0.66
CTNNA1-236ENST00000522792 LRRCC1Q9C099 1032 aa19.15■□□□□ 0.66
CTNNA1-236ENST00000522792 BCL11BQ9C0K0 894 aaPredicted RBP19.15■□□□□ 0.66
CTNNA1-236ENST00000522792 FAM196AQ6ZSG2 479 aa19.14■□□□□ 0.65
CTNNA1-236ENST00000522792 PA2G4Q9UQ80 394 aaKnown RBP19.14■□□□□ 0.65
CTNNA1-236ENST00000522792 ERVV-1B6SEH8 477 aa19.13■□□□□ 0.65
CTNNA1-236ENST00000522792 LY75O60449 1722 aa19.13■□□□□ 0.65
CTNNA1-236ENST00000522792 COL15A1P39059 1388 aa19.13■□□□□ 0.65
CTNNA1-236ENST00000522792 ANKRD36CQ5JPF3 1778 aa19.13■□□□□ 0.65
CTNNA1-236ENST00000522792 HSP90AB3PQ58FF7 597 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms