RNA–Protein interactions for RNA: ENST00000522774.1

RAB11FIP1-204, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best)

Gene RAB11FIP1, Length 3,078 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-204ENST00000522774 ZNF496Q96IT1 587 aaPredicted RBP13.07□□□□□ -0.32
RAB11FIP1-204ENST00000522774 SPG7Q9UQ90 795 aa13.07□□□□□ -0.32
RAB11FIP1-204ENST00000522774 DDX58O95786 925 aaKnown RBP13.07□□□□□ -0.32
RAB11FIP1-204ENST00000522774 CLASRPQ8N2M8 674 aaKnown RBP13.07□□□□□ -0.32
RAB11FIP1-204ENST00000522774 DDX49Q9Y6V7 483 aaKnown RBP13.07□□□□□ -0.32
RAB11FIP1-204ENST00000522774 UTYO14607 1347 aa13.07□□□□□ -0.32
RAB11FIP1-204ENST00000522774 TTC41PQ6P2S7 1318 aa13.07□□□□□ -0.32
RAB11FIP1-204ENST00000522774 RAD50Q92878 1312 aa13.07□□□□□ -0.32
RAB11FIP1-204ENST00000522774 CYP27B1O15528 508 aa13.07□□□□□ -0.32
RAB11FIP1-204ENST00000522774 CUL4AQ13619 759 aa13.07□□□□□ -0.32
RAB11FIP1-204ENST00000522774 KLHL40Q2TBA0 621 aa13.07□□□□□ -0.32
RAB11FIP1-204ENST00000522774 CWC27Q6UX04 472 aaKnown RBP13.07□□□□□ -0.32
RAB11FIP1-204ENST00000522774 LSG1Q9H089 658 aaKnown RBP13.07□□□□□ -0.32
RAB11FIP1-204ENST00000522774 LMBRD1Q9NUN5 540 aa13.07□□□□□ -0.32
RAB11FIP1-204ENST00000522774 TNS3Q68CZ2 1445 aa13.06□□□□□ -0.32
RAB11FIP1-204ENST00000522774 GLRX3O76003 335 aaKnown RBP13.06□□□□□ -0.32
RAB11FIP1-204ENST00000522774 PIP4K2AP48426 406 aaPredicted RBP13.06□□□□□ -0.32
RAB11FIP1-204ENST00000522774 MCM2P49736 904 aa13.06□□□□□ -0.32
RAB11FIP1-204ENST00000522774 FOXD4L5Q5VV16 416 aaPredicted RBP13.06□□□□□ -0.32
RAB11FIP1-204ENST00000522774 RIC3Q7Z5B4 369 aa13.06□□□□□ -0.32
RAB11FIP1-204ENST00000522774 IFNL2Q8IZJ0 200 aa13.06□□□□□ -0.32
RAB11FIP1-204ENST00000522774 XAGE3Q8WTP9 111 aa13.06□□□□□ -0.32
RAB11FIP1-204ENST00000522774 FOXD4L4Q8WXT5 416 aaPredicted RBP13.06□□□□□ -0.32
RAB11FIP1-204ENST00000522774 DCCP43146 1447 aa13.06□□□□□ -0.32
RAB11FIP1-204ENST00000522774 USP16Q9Y5T5 823 aa13.05□□□□□ -0.32
RAB11FIP1-204ENST00000522774 EPB41L2O43491 1005 aaKnown RBP13.05□□□□□ -0.32
RAB11FIP1-204ENST00000522774 SASH1O94885 1247 aa13.05□□□□□ -0.32
RAB11FIP1-204ENST00000522774 COPS6Q7L5N1 327 aa13.05□□□□□ -0.32
RAB11FIP1-204ENST00000522774 FAM43AQ8N2R8 423 aa13.05□□□□□ -0.32
RAB11FIP1-204ENST00000522774 ECHDC1Q9NTX5 307 aa13.05□□□□□ -0.32
RAB11FIP1-204ENST00000522774 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.05□□□□□ -0.32
RAB11FIP1-204ENST00000522774 IFIT2P09913 472 aaKnown RBP13.04□□□□□ -0.32
RAB11FIP1-204ENST00000522774 AACSQ86V21 672 aa13.04□□□□□ -0.32
RAB11FIP1-204ENST00000522774 RASEFQ8IZ41 740 aa13.04□□□□□ -0.32
RAB11FIP1-204ENST00000522774 ISY1Q9ULR0 285 aaKnown RBP13.04□□□□□ -0.32
RAB11FIP1-204ENST00000522774 SNX14Q9Y5W7 946 aa13.04□□□□□ -0.32
RAB11FIP1-204ENST00000522774 NEURL1BA8MQ27 555 aa13.04□□□□□ -0.32
RAB11FIP1-204ENST00000522774 LARP1Q6PKG0 1096 aaKnown RBP13.04□□□□□ -0.32
RAB11FIP1-204ENST00000522774 LRP10Q7Z4F1 713 aa13.04□□□□□ -0.32
RAB11FIP1-204ENST00000522774 ERC1Q8IUD2 1116 aa13.04□□□□□ -0.32
RAB11FIP1-204ENST00000522774 KLHDC4Q8TBB5 520 aa13.04□□□□□ -0.32
RAB11FIP1-204ENST00000522774 MYD88Q99836 296 aa13.04□□□□□ -0.32
RAB11FIP1-204ENST00000522774 CADPS2Q86UW7 1296 aa13.04□□□□□ -0.32
RAB11FIP1-204ENST00000522774 SIL1Q9H173 461 aa13.04□□□□□ -0.32
RAB11FIP1-204ENST00000522774 HDAC5Q9UQL6 1122 aa13.04□□□□□ -0.32
RAB11FIP1-204ENST00000522774 MRC1P22897 1456 aa13.04□□□□□ -0.32
RAB11FIP1-204ENST00000522774 SPATA31A3Q5VYP0 1347 aa13.03□□□□□ -0.32
RAB11FIP1-204ENST00000522774 EPHA10Q5JZY3 1008 aa13.03□□□□□ -0.32
RAB11FIP1-204ENST00000522774 EAF2Q96CJ1 260 aaPredicted RBP13.03□□□□□ -0.32
RAB11FIP1-204ENST00000522774 DCAF5Q96JK2 942 aa13.03□□□□□ -0.32
RAB11FIP1-204ENST00000522774 PRPF40AO75400 957 aaKnown RBP13.03□□□□□ -0.32
RAB11FIP1-204ENST00000522774 HSPA2P54652 639 aa13.03□□□□□ -0.32
RAB11FIP1-204ENST00000522774 GCKRQ14397 625 aa13.03□□□□□ -0.32
RAB11FIP1-204ENST00000522774 JARID2Q92833 1246 aaPredicted RBP13.03□□□□□ -0.32
RAB11FIP1-204ENST00000522774 TLR7Q9NYK1 1049 aaKnown RBP13.03□□□□□ -0.32
RAB11FIP1-204ENST00000522774 ABCC6O95255 1503 aa13.03□□□□□ -0.32
RAB11FIP1-204ENST00000522774 INTS4Q96HW7 963 aaKnown RBP13.02□□□□□ -0.32
RAB11FIP1-204ENST00000522774 METTL22Q9BUU2 404 aaPredicted RBP13.02□□□□□ -0.32
RAB11FIP1-204ENST00000522774 CCDC8Q9H0W5 538 aaPredicted RBP13.02□□□□□ -0.32
RAB11FIP1-204ENST00000522774 RRAGDQ9NQL2 400 aaPredicted RBP13.02□□□□□ -0.32
RAB11FIP1-204ENST00000522774 DIAPH3Q9NSV4 1193 aa13.02□□□□□ -0.32
RAB11FIP1-204ENST00000522774 PKD1L3Q7Z443 1732 aa13.02□□□□□ -0.32
RAB11FIP1-204ENST00000522774 BRD1O95696 1058 aa13.02□□□□□ -0.33
RAB11FIP1-204ENST00000522774 SNRPA1P09661 255 aaKnown RBP13.02□□□□□ -0.33
RAB11FIP1-204ENST00000522774 NCLP19338 710 aaKnown RBP13.02□□□□□ -0.33
RAB11FIP1-204ENST00000522774 NEXNQ0ZGT2 675 aa13.02□□□□□ -0.33
RAB11FIP1-204ENST00000522774 G3BP1Q13283 466 aaKnown RBP eCLIP13.02□□□□□ -0.33
RAB11FIP1-204ENST00000522774 TTC5Q8N0Z6 440 aa13.02□□□□□ -0.33
RAB11FIP1-204ENST00000522774 PTH1RQ03431 593 aa13.02□□□□□ -0.33
RAB11FIP1-204ENST00000522774 CAVIN1Q6NZI2 390 aaKnown RBP13.02□□□□□ -0.33
RAB11FIP1-204ENST00000522774 KIAA1211Q6ZU35 1233 aa13.02□□□□□ -0.33
RAB11FIP1-204ENST00000522774 GPT2Q8TD30 523 aa13.02□□□□□ -0.33
RAB11FIP1-204ENST00000522774 GPATCH3Q96I76 525 aa13.02□□□□□ -0.33
RAB11FIP1-204ENST00000522774 TTC14Q96N46 770 aa13.01□□□□□ -0.33
RAB11FIP1-204ENST00000522774 CPA1P15085 419 aa13.01□□□□□ -0.33
RAB11FIP1-204ENST00000522774 ANKRD13DQ6ZTN6 518 aa13.01□□□□□ -0.33
RAB11FIP1-204ENST00000522774 LARP6Q9BRS8 491 aaKnown RBP13.01□□□□□ -0.33
RAB11FIP1-204ENST00000522774 FMNL2Q96PY5 1086 aa13□□□□□ -0.33
RAB11FIP1-204ENST00000522774 GLI3P10071 1580 aa13□□□□□ -0.33
RAB11FIP1-204ENST00000522774 CPDO75976 1380 aa13□□□□□ -0.33
RAB11FIP1-204ENST00000522774 CABP4P57796 275 aa12.99□□□□□ -0.33
RAB11FIP1-204ENST00000522774 EVI5LQ96CN4 794 aa12.99□□□□□ -0.33
RAB11FIP1-204ENST00000522774 RBM27Q9P2N5 1060 aaKnown RBP12.99□□□□□ -0.33
RAB11FIP1-204ENST00000522774 AK2P54819 239 aa12.99□□□□□ -0.33
RAB11FIP1-204ENST00000522774 ZSCAN23Q3MJ62 389 aa12.99□□□□□ -0.33
RAB11FIP1-204ENST00000522774 BRINP3Q76B58 766 aa12.99□□□□□ -0.33
RAB11FIP1-204ENST00000522774 NSFL1CQ9UNZ2 370 aaKnown RBP12.99□□□□□ -0.33
RAB11FIP1-204ENST00000522774 XIRP1Q702N8 1843 aaKnown RBP12.99□□□□□ -0.33
RAB11FIP1-204ENST00000522774 RUFY3Q7L099 469 aa12.99□□□□□ -0.33
RAB11FIP1-204ENST00000522774 RUFY2Q8WXA3 655 aa12.99□□□□□ -0.33
RAB11FIP1-204ENST00000522774 FAM227BQ96M60 508 aa12.99□□□□□ -0.33
RAB11FIP1-204ENST00000522774 AFDNP55196 1824 aaKnown RBP12.98□□□□□ -0.33
RAB11FIP1-204ENST00000522774 ATP5J2-PTCD1G3V325 749 aa12.98□□□□□ -0.33
RAB11FIP1-204ENST00000522774 PTCD1O75127 700 aaKnown RBP12.98□□□□□ -0.33
RAB11FIP1-204ENST00000522774 PRPF40BQ6NWY9 871 aaKnown RBP12.98□□□□□ -0.33
RAB11FIP1-204ENST00000522774 BOLA2Q9H3K6 86 aa12.98□□□□□ -0.33
RAB11FIP1-204ENST00000522774 CASTP20810 708 aaKnown RBP12.98□□□□□ -0.33
RAB11FIP1-204ENST00000522774 ADCK5Q3MIX3 580 aa12.98□□□□□ -0.33
RAB11FIP1-204ENST00000522774 ARFGEF2Q9Y6D5 1785 aa12.98□□□□□ -0.33
RAB11FIP1-204ENST00000522774 ZNF445P59923 1031 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms