RNA–Protein interactions for RNA: ENST00000521977.1

SHPRH-209, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 5

Gene SHPRH, Length 927 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-209ENST00000521977 USP16Q9Y5T5 823 aa12.1□□□□□ -0.47
SHPRH-209ENST00000521977 PXDNLA1KZ92 1463 aa12.09□□□□□ -0.47
SHPRH-209ENST00000521977 PRIM1P49642 420 aaKnown RBP12.09□□□□□ -0.47
SHPRH-209ENST00000521977 LRP10Q7Z4F1 713 aa12.09□□□□□ -0.47
SHPRH-209ENST00000521977 CCDC136Q96JN2 1154 aa12.09□□□□□ -0.47
SHPRH-209ENST00000521977 PHAXQ9H814 394 aaKnown RBP12.09□□□□□ -0.47
SHPRH-209ENST00000521977 N4BP2Q86UW6 1770 aaPredicted RBP12.09□□□□□ -0.47
SHPRH-209ENST00000521977 ERBB4Q15303 1308 aa12.09□□□□□ -0.47
SHPRH-209ENST00000521977 ZBTB7BO15156 539 aaPredicted RBP12.08□□□□□ -0.48
SHPRH-209ENST00000521977 CHRM1P11229 460 aaPredicted RBP12.08□□□□□ -0.48
SHPRH-209ENST00000521977 ITPRIPQ8IWB1 547 aa12.08□□□□□ -0.48
SHPRH-209ENST00000521977 ZBTB40Q9NUA8 1239 aa12.08□□□□□ -0.48
SHPRH-209ENST00000521977 HYPKQ9NX55 129 aa12.08□□□□□ -0.48
SHPRH-209ENST00000521977 CICQ96RK0 1608 aaPredicted RBP12.08□□□□□ -0.48
SHPRH-209ENST00000521977 POTEFA5A3E0 1075 aa12.07□□□□□ -0.48
SHPRH-209ENST00000521977 POTEJP0CG39 1038 aa12.07□□□□□ -0.48
SHPRH-209ENST00000521977 PYGBP11216 843 aa12.07□□□□□ -0.48
SHPRH-209ENST00000521977 FKBP5Q13451 457 aaPredicted RBP12.07□□□□□ -0.48
SHPRH-209ENST00000521977 PROSER3Q2NL68 480 aa12.07□□□□□ -0.48
SHPRH-209ENST00000521977 ZNF772Q68DY9 489 aaPredicted RBP12.07□□□□□ -0.48
SHPRH-209ENST00000521977 CHMP4BQ9H444 224 aaKnown RBP12.07□□□□□ -0.48
SHPRH-209ENST00000521977 PTCD1O75127 700 aaKnown RBP12.06□□□□□ -0.48
SHPRH-209ENST00000521977 ANXA1P04083 346 aa12.06□□□□□ -0.48
SHPRH-209ENST00000521977 CCT4P50991 539 aaKnown RBP12.06□□□□□ -0.48
SHPRH-209ENST00000521977 SEPT12Q8IYM1 358 aa12.06□□□□□ -0.48
SHPRH-209ENST00000521977 ACSBG1Q96GR2 724 aa12.06□□□□□ -0.48
SHPRH-209ENST00000521977 TMEM106CQ9BVX2 250 aa12.06□□□□□ -0.48
SHPRH-209ENST00000521977 TEX13AQ9BXU3 409 aaPredicted RBP12.06□□□□□ -0.48
SHPRH-209ENST00000521977 NHSQ6T4R5 1651 aa12.06□□□□□ -0.48
SHPRH-209ENST00000521977 KDM2BQ8NHM5 1336 aa12.06□□□□□ -0.48
SHPRH-209ENST00000521977 ADCY9O60503 1353 aa12.05□□□□□ -0.48
SHPRH-209ENST00000521977 ATP10DQ9P241 1426 aa12.05□□□□□ -0.48
SHPRH-209ENST00000521977 F6X3S4 739 aa12.05□□□□□ -0.48
SHPRH-209ENST00000521977 SYTL4Q96C24 671 aaPredicted RBP12.05□□□□□ -0.48
SHPRH-209ENST00000521977 SLC4A9Q96Q91 983 aa12.05□□□□□ -0.48
SHPRH-209ENST00000521977 PCDHB15Q9Y5E8 787 aa12.05□□□□□ -0.48
SHPRH-209ENST00000521977 ZNF831Q5JPB2 1677 aa12.05□□□□□ -0.48
SHPRH-209ENST00000521977 TJP1Q07157 1748 aa12.05□□□□□ -0.48
SHPRH-209ENST00000521977 KAT6BQ8WYB5 2073 aa12.04□□□□□ -0.48
SHPRH-209ENST00000521977 A0A0G2JS52 829 aa12.04□□□□□ -0.48
SHPRH-209ENST00000521977 KCNQ2O43526 872 aa12.04□□□□□ -0.48
SHPRH-209ENST00000521977 SEC24BO95487 1268 aa12.04□□□□□ -0.48
SHPRH-209ENST00000521977 MYT1Q01538 1121 aa12.04□□□□□ -0.48
SHPRH-209ENST00000521977 IFNLR1Q8IU57 520 aaPredicted RBP12.04□□□□□ -0.48
SHPRH-209ENST00000521977 SBF2Q86WG5 1849 aa12.04□□□□□ -0.48
SHPRH-209ENST00000521977 IBTKQ9P2D0 1353 aaPredicted RBP12.04□□□□□ -0.48
SHPRH-209ENST00000521977 PI4KAP2A4QPH2 592 aa12.03□□□□□ -0.48
SHPRH-209ENST00000521977 NBPF26B4DH59 902 aa12.03□□□□□ -0.48
SHPRH-209ENST00000521977 RBM6P78332 1123 aaKnown RBP12.03□□□□□ -0.48
SHPRH-209ENST00000521977 NBPF14Q5TI25 921 aa12.03□□□□□ -0.48
SHPRH-209ENST00000521977 NBPF10Q6P3W6 841 aaKnown RBP12.03□□□□□ -0.48
SHPRH-209ENST00000521977 KSR2Q6VAB6 950 aa12.03□□□□□ -0.48
SHPRH-209ENST00000521977 DNAJC10Q8IXB1 793 aa12.03□□□□□ -0.48
SHPRH-209ENST00000521977 NBPF15Q8N660 670 aa12.03□□□□□ -0.48
SHPRH-209ENST00000521977 PI4KAP1Q8N8J0 262 aa12.03□□□□□ -0.48
SHPRH-209ENST00000521977 DNAAF4Q8WXU2 420 aa12.03□□□□□ -0.48
SHPRH-209ENST00000521977 SPOCK2Q92563 424 aa12.03□□□□□ -0.48
SHPRH-209ENST00000521977 SMARCC1Q92922 1105 aaPredicted RBP12.03□□□□□ -0.48
SHPRH-209ENST00000521977 SCUBE2Q9NQ36 999 aa12.03□□□□□ -0.48
SHPRH-209ENST00000521977 BRWD3Q6RI45 1802 aa12.02□□□□□ -0.48
SHPRH-209ENST00000521977 DDX58O95786 925 aaKnown RBP12.02□□□□□ -0.49
SHPRH-209ENST00000521977 A1BGP04217 495 aa12.02□□□□□ -0.49
SHPRH-209ENST00000521977 CYP19A1P11511 503 aaPredicted RBP12.02□□□□□ -0.49
SHPRH-209ENST00000521977 MYL6BP14649 208 aa12.02□□□□□ -0.49
SHPRH-209ENST00000521977 BEND3Q5T5X7 828 aa12.02□□□□□ -0.49
SHPRH-209ENST00000521977 SLC4A10Q6U841 1118 aa12.02□□□□□ -0.49
SHPRH-209ENST00000521977 CENPQQ7L2Z9 268 aaPredicted RBP12.02□□□□□ -0.49
SHPRH-209ENST00000521977 XAGE3Q8WTP9 111 aa12.02□□□□□ -0.49
SHPRH-209ENST00000521977 PALLDQ8WX93 1383 aa12.02□□□□□ -0.49
SHPRH-209ENST00000521977 RREB1Q92766 1687 aa12.01□□□□□ -0.49
SHPRH-209ENST00000521977 STARD3NLO95772 234 aa12.01□□□□□ -0.49
SHPRH-209ENST00000521977 IGHDP01880 384 aa12.01□□□□□ -0.49
SHPRH-209ENST00000521977 HDAC1Q13547 482 aaPredicted RBP12.01□□□□□ -0.49
SHPRH-209ENST00000521977 COPS6Q7L5N1 327 aa12.01□□□□□ -0.49
SHPRH-209ENST00000521977 ZNF467Q7Z7K2 595 aaPredicted RBP12.01□□□□□ -0.49
SHPRH-209ENST00000521977 COLQQ9Y215 455 aaPredicted RBP12.01□□□□□ -0.49
SHPRH-209ENST00000521977 BTAF1O14981 1849 aa12.01□□□□□ -0.49
SHPRH-209ENST00000521977 LOC102724428A0A0B4J2F2 783 aa12□□□□□ -0.49
SHPRH-209ENST00000521977 PIP4K2AP48426 406 aaPredicted RBP12□□□□□ -0.49
SHPRH-209ENST00000521977 SIK1P57059 783 aa12□□□□□ -0.49
SHPRH-209ENST00000521977 MEIS3Q99687 375 aa12□□□□□ -0.49
SHPRH-209ENST00000521977 SRCIN1Q9C0H9 1055 aa12□□□□□ -0.49
SHPRH-209ENST00000521977 RGS17Q9UGC6 210 aaPredicted RBP12□□□□□ -0.49
SHPRH-209ENST00000521977 MAP3K2Q9Y2U5 619 aa12□□□□□ -0.49
SHPRH-209ENST00000521977 ALDH1L1O75891 902 aa11.99□□□□□ -0.49
SHPRH-209ENST00000521977 AIMP1Q12904 312 aaKnown RBP11.99□□□□□ -0.49
SHPRH-209ENST00000521977 FAM182BQ5T319 152 aa11.99□□□□□ -0.49
SHPRH-209ENST00000521977 ANKRD13DQ6ZTN6 518 aa11.99□□□□□ -0.49
SHPRH-209ENST00000521977 PTF1AQ7RTS3 328 aa11.99□□□□□ -0.49
SHPRH-209ENST00000521977 KRT27Q7Z3Y8 459 aa11.99□□□□□ -0.49
SHPRH-209ENST00000521977 PLBD2Q8NHP8 589 aa11.99□□□□□ -0.49
SHPRH-209ENST00000521977 RWDD1Q9H446 243 aaPredicted RBP11.99□□□□□ -0.49
SHPRH-209ENST00000521977 COL5A3P25940 1745 aaPredicted RBP11.99□□□□□ -0.49
SHPRH-209ENST00000521977 NUP188Q5SRE5 1749 aa11.99□□□□□ -0.49
SHPRH-209ENST00000521977 ARFGEF2Q9Y6D5 1785 aa11.99□□□□□ -0.49
SHPRH-209ENST00000521977 GNAI3P08754 354 aa11.98□□□□□ -0.49
SHPRH-209ENST00000521977 ITPK1Q13572 414 aa11.98□□□□□ -0.49
SHPRH-209ENST00000521977 FAM196AQ6ZSG2 479 aa11.98□□□□□ -0.49
SHPRH-209ENST00000521977 LINS1Q8NG48 757 aa11.98□□□□□ -0.49
SHPRH-209ENST00000521977 METTL22Q9BUU2 404 aaPredicted RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms