RNA–Protein interactions for RNA: ENST00000521049.5

TRAM1-204, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 872 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-204ENST00000521049 C7orf43Q8WVR3 580 aa22.04■■□□□ 1.12
TRAM1-204ENST00000521049 PHACTR3Q96KR7 559 aa22.04■■□□□ 1.12
TRAM1-204ENST00000521049 COL3A1P02461 1466 aaPredicted RBP22.03■■□□□ 1.12
TRAM1-204ENST00000521049 IQCA1LA6NCM1 817 aa22.03■■□□□ 1.12
TRAM1-204ENST00000521049 KLRG2A4D1S0 409 aaPredicted RBP22.02■■□□□ 1.12
TRAM1-204ENST00000521049 NBPF5PQ86XG9 351 aaPredicted RBP22.02■■□□□ 1.12
TRAM1-204ENST00000521049 TIAM2Q8IVF5 1701 aa22.02■■□□□ 1.12
TRAM1-204ENST00000521049 ANKRD31Q8N7Z5 1873 aa22.01■■□□□ 1.11
TRAM1-204ENST00000521049 RGL2O15211 777 aa22.01■■□□□ 1.11
TRAM1-204ENST00000521049 POTEIP0CG38 1075 aa22.01■■□□□ 1.11
TRAM1-204ENST00000521049 POTEJP0CG39 1038 aa22.01■■□□□ 1.11
TRAM1-204ENST00000521049 L3MBTL3Q96JM7 780 aaPredicted RBP22.01■■□□□ 1.11
TRAM1-204ENST00000521049 ZNF652Q9Y2D9 606 aa22.01■■□□□ 1.11
TRAM1-204ENST00000521049 VIRMAQ69YN4 1812 aaKnown RBP22.01■■□□□ 1.11
TRAM1-204ENST00000521049 SNRPA1P09661 255 aaKnown RBP22■■□□□ 1.11
TRAM1-204ENST00000521049 NPR1P16066 1061 aa22■■□□□ 1.11
TRAM1-204ENST00000521049 PRKAR2BP31323 418 aa22■■□□□ 1.11
TRAM1-204ENST00000521049 TPTE2Q6XPS3 522 aa22■■□□□ 1.11
TRAM1-204ENST00000521049 MKRN1Q9UHC7 482 aaKnown RBP22■■□□□ 1.11
TRAM1-204ENST00000521049 CCDC88AQ3V6T2 1871 aa22■■□□□ 1.11
TRAM1-204ENST00000521049 FER1L6Q2WGJ9 1857 aa21.99■■□□□ 1.11
TRAM1-204ENST00000521049 SCN7AQ01118 1682 aa21.99■■□□□ 1.11
TRAM1-204ENST00000521049 CCDC93Q567U6 631 aa21.99■■□□□ 1.11
TRAM1-204ENST00000521049 LDHDQ86WU2 507 aa21.99■■□□□ 1.11
TRAM1-204ENST00000521049 RSPH6AQ9H0K4 717 aa21.99■■□□□ 1.11
TRAM1-204ENST00000521049 CNGB1Q14028 1251 aaPredicted RBP21.98■■□□□ 1.11
TRAM1-204ENST00000521049 CFAP53Q96M91 514 aa21.98■■□□□ 1.11
TRAM1-204ENST00000521049 TAF1DQ9H5J8 278 aaPredicted RBP21.98■■□□□ 1.11
TRAM1-204ENST00000521049 PASKQ96RG2 1323 aa21.98■■□□□ 1.11
TRAM1-204ENST00000521049 PRAMEF22A3QJZ6 481 aa21.97■■□□□ 1.11
TRAM1-204ENST00000521049 PIP4K2AP48426 406 aaPredicted RBP21.97■■□□□ 1.11
TRAM1-204ENST00000521049 FKBP4Q02790 459 aaKnown RBP eCLIP21.97■■□□□ 1.11
TRAM1-204ENST00000521049 NUDCQ9Y266 331 aa21.97■■□□□ 1.11
TRAM1-204ENST00000521049 RTKN2Q8IZC4 609 aa21.96■■□□□ 1.11
TRAM1-204ENST00000521049 RTF1Q92541 710 aaKnown RBP21.96■■□□□ 1.11
TRAM1-204ENST00000521049 DICER1Q9UPY3 1922 aaKnown RBP21.96■■□□□ 1.11
TRAM1-204ENST00000521049 COL11A2P13942 1736 aaPredicted RBP21.95■■□□□ 1.1
TRAM1-204ENST00000521049 SLX4Q8IY92 1834 aa21.95■■□□□ 1.1
TRAM1-204ENST00000521049 NIP7Q9Y221 180 aaKnown RBP eCLIP21.95■■□□□ 1.1
TRAM1-204ENST00000521049 CNTNAP1P78357 1384 aa21.95■■□□□ 1.1
TRAM1-204ENST00000521049 SIPA1L3O60292 1781 aaPredicted RBP21.94■■□□□ 1.1
TRAM1-204ENST00000521049 ITGBL1O95965 494 aaPredicted RBP21.94■■□□□ 1.1
TRAM1-204ENST00000521049 ALDH1B1P30837 517 aa21.94■■□□□ 1.1
TRAM1-204ENST00000521049 TMEM88BA6NKF7 163 aa21.93■■□□□ 1.1
TRAM1-204ENST00000521049 NBPF26B4DH59 902 aa21.93■■□□□ 1.1
TRAM1-204ENST00000521049 HTATSF1O43719 755 aaKnown RBP21.93■■□□□ 1.1
TRAM1-204ENST00000521049 NBPF10Q6P3W6 841 aaKnown RBP21.93■■□□□ 1.1
TRAM1-204ENST00000521049 MCM10Q7L590 875 aa21.93■■□□□ 1.1
TRAM1-204ENST00000521049 NBPF15Q8N660 670 aa21.93■■□□□ 1.1
TRAM1-204ENST00000521049 ZNF277Q9NRM2 450 aaPredicted RBP21.93■■□□□ 1.1
TRAM1-204ENST00000521049 HACL1Q9UJ83 578 aa21.93■■□□□ 1.1
TRAM1-204ENST00000521049 PRDM10Q9NQV6 1147 aa21.92■■□□□ 1.1
TRAM1-204ENST00000521049 FOXN1O15353 648 aa21.91■■□□□ 1.1
TRAM1-204ENST00000521049 U2AF1L5P0DN76 240 aaPredicted RBP21.91■■□□□ 1.1
TRAM1-204ENST00000521049 U2AF1Q01081 240 aaKnown RBP eCLIP21.91■■□□□ 1.1
TRAM1-204ENST00000521049 PNMA8AQ86V59 439 aaPredicted RBP21.91■■□□□ 1.1
TRAM1-204ENST00000521049 ZNF541Q9H0D2 1346 aa21.9■■□□□ 1.1
TRAM1-204ENST00000521049 FZD9O00144 591 aa21.9■■□□□ 1.1
TRAM1-204ENST00000521049 TAF7Q15545 349 aaPredicted RBP21.9■■□□□ 1.1
TRAM1-204ENST00000521049 EAPPQ56P03 285 aaPredicted RBP21.9■■□□□ 1.1
TRAM1-204ENST00000521049 SYNE4Q8N205 404 aa21.9■■□□□ 1.1
TRAM1-204ENST00000521049 GTF2E1P29083 439 aaPredicted RBP21.89■■□□□ 1.09
TRAM1-204ENST00000521049 EPHX2P34913 555 aa21.89■■□□□ 1.09
TRAM1-204ENST00000521049 IARSP41252 1262 aaKnown RBP21.89■■□□□ 1.09
TRAM1-204ENST00000521049 VEGFBP49765 207 aa21.89■■□□□ 1.09
TRAM1-204ENST00000521049 HLFQ16534 295 aa21.89■■□□□ 1.09
TRAM1-204ENST00000521049 OLFM4Q6UX06 510 aa21.89■■□□□ 1.09
TRAM1-204ENST00000521049 CLEC11AQ9Y240 323 aa21.89■■□□□ 1.09
TRAM1-204ENST00000521049 FAM177BA6PVY3 158 aa21.88■■□□□ 1.09
TRAM1-204ENST00000521049 DCTN1Q14203 1278 aa21.88■■□□□ 1.09
TRAM1-204ENST00000521049 CTCFP49711 727 aaPredicted RBP21.87■■□□□ 1.09
TRAM1-204ENST00000521049 CC2D2BQ6DHV5 1058 aa21.87■■□□□ 1.09
TRAM1-204ENST00000521049 GPC2Q8N158 579 aa21.87■■□□□ 1.09
TRAM1-204ENST00000521049 PIAS4Q8N2W9 510 aaPredicted RBP21.87■■□□□ 1.09
TRAM1-204ENST00000521049 AIDAQ96BJ3 306 aa21.87■■□□□ 1.09
TRAM1-204ENST00000521049 PSMD1Q99460 953 aa21.87■■□□□ 1.09
TRAM1-204ENST00000521049 BCORQ6W2J9 1755 aa21.87■■□□□ 1.09
TRAM1-204ENST00000521049 SCN4AP35499 1836 aa21.86■■□□□ 1.09
TRAM1-204ENST00000521049 ERVV-1B6SEH8 477 aa21.86■■□□□ 1.09
TRAM1-204ENST00000521049 CRY2Q49AN0 593 aa21.86■■□□□ 1.09
TRAM1-204ENST00000521049 CNTROBQ8N137 903 aa21.86■■□□□ 1.09
TRAM1-204ENST00000521049 NYXQ9GZU5 481 aa21.86■■□□□ 1.09
TRAM1-204ENST00000521049 WBP1LQ9NX94 342 aa21.86■■□□□ 1.09
TRAM1-204ENST00000521049 ARFGEF2Q9Y6D5 1785 aa21.85■■□□□ 1.09
TRAM1-204ENST00000521049 PPP2R1AP30153 589 aa21.85■■□□□ 1.09
TRAM1-204ENST00000521049 JDP2Q8WYK2 163 aa21.85■■□□□ 1.09
TRAM1-204ENST00000521049 RASSF10A6NK89 507 aa21.84■■□□□ 1.09
TRAM1-204ENST00000521049 DEFB115Q30KQ5 88 aa21.84■■□□□ 1.09
TRAM1-204ENST00000521049 GRIPAP1Q4V328 841 aa21.84■■□□□ 1.09
TRAM1-204ENST00000521049 RNF123Q5XPI4 1314 aa21.83■■□□□ 1.09
TRAM1-204ENST00000521049 MAP1SQ66K74 1059 aaPredicted RBP21.83■■□□□ 1.09
TRAM1-204ENST00000521049 PNISRQ8TF01 805 aaKnown RBP21.83■■□□□ 1.09
TRAM1-204ENST00000521049 MIS18AQ9NYP9 233 aa21.83■■□□□ 1.09
TRAM1-204ENST00000521049 HOXA10P31260 410 aaPredicted RBP21.82■■□□□ 1.08
TRAM1-204ENST00000521049 EIF6P56537 245 aaKnown RBP21.81■■□□□ 1.08
TRAM1-204ENST00000521049 NUTM1Q86Y26 1132 aa21.8■■□□□ 1.08
TRAM1-204ENST00000521049 NGEFQ8N5V2 710 aa21.8■■□□□ 1.08
TRAM1-204ENST00000521049 SNED1Q8TER0 1413 aa21.8■■□□□ 1.08
TRAM1-204ENST00000521049 MAP3K15Q6ZN16 1313 aa21.8■■□□□ 1.08
TRAM1-204ENST00000521049 MAP2K1Q02750 393 aaPredicted RBP21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms