RNA–Protein interactions for RNA: ENST00000520608.2

ZNF260-201, Transcript of zinc finger protein 260, humanhuman

TSL 3

Gene ZNF260, Length 330 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF260-201ENST00000520608 BICDL1Q6ZP65 573 aa11.46□□□□□ -0.57
ZNF260-201ENST00000520608 KIF12Q96FN5 646 aa11.46□□□□□ -0.57
ZNF260-201ENST00000520608 ZNF330Q9Y3S2 320 aaPredicted RBP11.46□□□□□ -0.57
ZNF260-201ENST00000520608 STARD3NLO95772 234 aa11.45□□□□□ -0.58
ZNF260-201ENST00000520608 SERPINB2P05120 415 aa11.45□□□□□ -0.58
ZNF260-201ENST00000520608 RASSF7Q02833 373 aa11.45□□□□□ -0.58
ZNF260-201ENST00000520608 UBR2Q8IWV8 1755 aa11.45□□□□□ -0.58
ZNF260-201ENST00000520608 COL3A1P02461 1466 aaPredicted RBP11.44□□□□□ -0.58
ZNF260-201ENST00000520608 AFDNP55196 1824 aaKnown RBP11.44□□□□□ -0.58
ZNF260-201ENST00000520608 GNAT3A8MTJ3 354 aa11.44□□□□□ -0.58
ZNF260-201ENST00000520608 C2CD5Q86YS7 1000 aa11.44□□□□□ -0.58
ZNF260-201ENST00000520608 GAS2L2Q8NHY3 880 aa11.44□□□□□ -0.58
ZNF260-201ENST00000520608 RBM46Q8TBY0 533 aaKnown RBP11.44□□□□□ -0.58
ZNF260-201ENST00000520608 BCL2L12Q9HB09 334 aa11.44□□□□□ -0.58
ZNF260-201ENST00000520608 NRXN2Q9P2S2 1712 aa11.43□□□□□ -0.58
ZNF260-201ENST00000520608 CARMIL3Q8ND23 1372 aa11.43□□□□□ -0.58
ZNF260-201ENST00000520608 A0A087WZG4 1122 aa11.43□□□□□ -0.58
ZNF260-201ENST00000520608 SEC24BO95487 1268 aa11.43□□□□□ -0.58
ZNF260-201ENST00000520608 ZNF790Q6PG37 636 aa11.43□□□□□ -0.58
ZNF260-201ENST00000520608 NPM2Q86SE8 214 aaKnown RBP11.43□□□□□ -0.58
ZNF260-201ENST00000520608 TTLL6Q8N841 843 aa11.43□□□□□ -0.58
ZNF260-201ENST00000520608 ZNF496Q96IT1 587 aaPredicted RBP11.43□□□□□ -0.58
ZNF260-201ENST00000520608 RRAGCQ9HB90 399 aa11.43□□□□□ -0.58
ZNF260-201ENST00000520608 TNRC6CQ9HCJ0 1690 aaKnown RBP11.43□□□□□ -0.58
ZNF260-201ENST00000520608 HEG1Q9ULI3 1381 aa11.42□□□□□ -0.58
ZNF260-201ENST00000520608 DLEC1Q9Y238 1755 aa11.42□□□□□ -0.58
ZNF260-201ENST00000520608 H0YIN7 160 aa11.42□□□□□ -0.58
ZNF260-201ENST00000520608 NPHP1O15259 732 aa11.42□□□□□ -0.58
ZNF260-201ENST00000520608 TIE1P35590 1138 aa11.42□□□□□ -0.58
ZNF260-201ENST00000520608 ZBTB47Q9UFB7 747 aaPredicted RBP11.42□□□□□ -0.58
ZNF260-201ENST00000520608 WDR90Q96KV7 1748 aa11.42□□□□□ -0.58
ZNF260-201ENST00000520608 SCN7AQ01118 1682 aa11.42□□□□□ -0.58
ZNF260-201ENST00000520608 NPC1L1Q9UHC9 1359 aa11.41□□□□□ -0.58
ZNF260-201ENST00000520608 LMNB1P20700 586 aa11.41□□□□□ -0.58
ZNF260-201ENST00000520608 EIF5P55010 431 aaKnown RBP11.41□□□□□ -0.58
ZNF260-201ENST00000520608 HTRA3P83110 453 aa11.41□□□□□ -0.58
ZNF260-201ENST00000520608 TBC1D9BQ66K14 1250 aa11.41□□□□□ -0.58
ZNF260-201ENST00000520608 IL17REQ8NFR9 667 aa11.41□□□□□ -0.58
ZNF260-201ENST00000520608 ZNF622Q969S3 477 aaKnown RBP eCLIP11.41□□□□□ -0.58
ZNF260-201ENST00000520608 CFAP53Q96M91 514 aa11.41□□□□□ -0.58
ZNF260-201ENST00000520608 FMNL2Q96PY5 1086 aa11.41□□□□□ -0.58
ZNF260-201ENST00000520608 TEX13AQ9BXU3 409 aaPredicted RBP11.41□□□□□ -0.58
ZNF260-201ENST00000520608 TBC1D2BQ9UPU7 963 aa11.41□□□□□ -0.58
ZNF260-201ENST00000520608 SBF1O95248 1867 aa11.4□□□□□ -0.58
ZNF260-201ENST00000520608 BTBD11A6QL63 1104 aa11.4□□□□□ -0.58
ZNF260-201ENST00000520608 PRKAR2BP31323 418 aa11.4□□□□□ -0.58
ZNF260-201ENST00000520608 FSTL1Q12841 308 aa11.4□□□□□ -0.58
ZNF260-201ENST00000520608 CCDC24Q8N4L8 307 aa11.4□□□□□ -0.58
ZNF260-201ENST00000520608 TRPC6Q9Y210 931 aa11.4□□□□□ -0.58
ZNF260-201ENST00000520608 SIPA1L3O60292 1781 aaPredicted RBP11.4□□□□□ -0.58
ZNF260-201ENST00000520608 TIAM2Q8IVF5 1701 aa11.4□□□□□ -0.58
ZNF260-201ENST00000520608 ZC3H4Q9UPT8 1303 aaKnown RBP11.39□□□□□ -0.59
ZNF260-201ENST00000520608 A1BGP04217 495 aa11.39□□□□□ -0.59
ZNF260-201ENST00000520608 PDE6BP35913 854 aa11.39□□□□□ -0.59
ZNF260-201ENST00000520608 DNAJC5GQ8N7S2 189 aa11.39□□□□□ -0.59
ZNF260-201ENST00000520608 SMC1BQ8NDV3 1235 aa11.39□□□□□ -0.59
ZNF260-201ENST00000520608 PHACTR3Q96KR7 559 aa11.39□□□□□ -0.59
ZNF260-201ENST00000520608 IL6STP40189 918 aaPredicted RBP11.38□□□□□ -0.59
ZNF260-201ENST00000520608 PRELPP51888 382 aa11.38□□□□□ -0.59
ZNF260-201ENST00000520608 PRR5LQ6MZQ0 368 aa11.38□□□□□ -0.59
ZNF260-201ENST00000520608 CNBD1Q8NA66 436 aa11.38□□□□□ -0.59
ZNF260-201ENST00000520608 SETDB2Q96T68 719 aa11.38□□□□□ -0.59
ZNF260-201ENST00000520608 RSPH6AQ9H0K4 717 aa11.38□□□□□ -0.59
ZNF260-201ENST00000520608 FBXO3Q9UK99 471 aa11.38□□□□□ -0.59
ZNF260-201ENST00000520608 NUDCQ9Y266 331 aa11.38□□□□□ -0.59
ZNF260-201ENST00000520608 CEMIPQ8WUJ3 1361 aa11.38□□□□□ -0.59
ZNF260-201ENST00000520608 COL11A2P13942 1736 aaPredicted RBP11.38□□□□□ -0.59
ZNF260-201ENST00000520608 GLTPD2A6NH11 291 aa11.37□□□□□ -0.59
ZNF260-201ENST00000520608 NFKBIEO00221 500 aa11.37□□□□□ -0.59
ZNF260-201ENST00000520608 KCNQ3O43525 872 aa11.37□□□□□ -0.59
ZNF260-201ENST00000520608 C21orf2O43822 256 aa11.37□□□□□ -0.59
ZNF260-201ENST00000520608 U2AF1L5P0DN76 240 aaPredicted RBP11.37□□□□□ -0.59
ZNF260-201ENST00000520608 PIP4K2AP48426 406 aaPredicted RBP11.37□□□□□ -0.59
ZNF260-201ENST00000520608 ST5P78524 1137 aa11.37□□□□□ -0.59
ZNF260-201ENST00000520608 U2AF1Q01081 240 aaKnown RBP eCLIP11.37□□□□□ -0.59
ZNF260-201ENST00000520608 DZIP3Q86Y13 1208 aaKnown RBP11.37□□□□□ -0.59
ZNF260-201ENST00000520608 RASEFQ8IZ41 740 aa11.37□□□□□ -0.59
ZNF260-201ENST00000520608 RTF1Q92541 710 aaKnown RBP11.37□□□□□ -0.59
ZNF260-201ENST00000520608 BRIP1Q9BX63 1249 aa11.37□□□□□ -0.59
ZNF260-201ENST00000520608 ANKRD31Q8N7Z5 1873 aa11.37□□□□□ -0.59
ZNF260-201ENST00000520608 MAP3K13O43283 966 aa11.36□□□□□ -0.59
ZNF260-201ENST00000520608 CAMTA2O94983 1202 aa11.36□□□□□ -0.59
ZNF260-201ENST00000520608 VEGFAP15692 232 aaPredicted RBP11.36□□□□□ -0.59
ZNF260-201ENST00000520608 MCM10Q7L590 875 aa11.36□□□□□ -0.59
ZNF260-201ENST00000520608 KLRG1Q96E93 195 aa11.36□□□□□ -0.59
ZNF260-201ENST00000520608 PDZRN3Q9UPQ7 1066 aa11.36□□□□□ -0.59
ZNF260-201ENST00000520608 COLQQ9Y215 455 aaPredicted RBP11.36□□□□□ -0.59
ZNF260-201ENST00000520608 PRAMEF22A3QJZ6 481 aa11.35□□□□□ -0.59
ZNF260-201ENST00000520608 ERFEQ4G0M1 354 aa11.35□□□□□ -0.59
ZNF260-201ENST00000520608 DPY19L2Q6NUT2 758 aa11.35□□□□□ -0.59
ZNF260-201ENST00000520608 USP16Q9Y5T5 823 aa11.35□□□□□ -0.59
ZNF260-201ENST00000520608 BCORQ6W2J9 1755 aa11.35□□□□□ -0.59
ZNF260-201ENST00000520608 CCDC88AQ3V6T2 1871 aa11.34□□□□□ -0.59
ZNF260-201ENST00000520608 PPP2R1AP30153 589 aa11.34□□□□□ -0.59
ZNF260-201ENST00000520608 NBPF5PQ86XG9 351 aaPredicted RBP11.34□□□□□ -0.59
ZNF260-201ENST00000520608 CNKSR1Q969H4 720 aa11.34□□□□□ -0.59
ZNF260-201ENST00000520608 TAOK3Q9H2K8 898 aa11.34□□□□□ -0.59
ZNF260-201ENST00000520608 ZNF652Q9Y2D9 606 aa11.34□□□□□ -0.59
ZNF260-201ENST00000520608 TTLL13PA6NNM8 815 aa11.33□□□□□ -0.6
ZNF260-201ENST00000520608 SNRPA1P09661 255 aaKnown RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms