RNA–Protein interactions for RNA: ENST00000519575.5

PDGFRB-205, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 712 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-205ENST00000519575 PNMA6EA0A0J9YXQ4 647 aa12.44□□□□□ -0.42
PDGFRB-205ENST00000519575 PRAMEF22A3QJZ6 481 aa12.44□□□□□ -0.42
PDGFRB-205ENST00000519575 SURF6O75683 361 aaKnown RBP12.44□□□□□ -0.42
PDGFRB-205ENST00000519575 NBPF7P0C2Y1 421 aaPredicted RBP12.44□□□□□ -0.42
PDGFRB-205ENST00000519575 OS9Q13438 667 aaPredicted RBP12.44□□□□□ -0.42
PDGFRB-205ENST00000519575 VPS72Q15906 364 aa12.44□□□□□ -0.42
PDGFRB-205ENST00000519575 LRP10Q7Z4F1 713 aa12.44□□□□□ -0.42
PDGFRB-205ENST00000519575 SMARCC1Q92922 1105 aaPredicted RBP12.44□□□□□ -0.42
PDGFRB-205ENST00000519575 STAP2Q9UGK3 403 aa12.44□□□□□ -0.42
PDGFRB-205ENST00000519575 TUBGCP6Q96RT7 1819 aa12.44□□□□□ -0.42
PDGFRB-205ENST00000519575 ANKRD36CQ5JPF3 1778 aa12.43□□□□□ -0.42
PDGFRB-205ENST00000519575 TTC41PQ6P2S7 1318 aa12.43□□□□□ -0.42
PDGFRB-205ENST00000519575 ERC2O15083 957 aa12.43□□□□□ -0.42
PDGFRB-205ENST00000519575 REC8O95072 547 aa12.43□□□□□ -0.42
PDGFRB-205ENST00000519575 CLASRPQ8N2M8 674 aaKnown RBP12.43□□□□□ -0.42
PDGFRB-205ENST00000519575 CCDC191Q8NCU4 936 aa12.43□□□□□ -0.42
PDGFRB-205ENST00000519575 PIGBQ92521 554 aa12.43□□□□□ -0.42
PDGFRB-205ENST00000519575 MYD88Q99836 296 aa12.43□□□□□ -0.42
PDGFRB-205ENST00000519575 EXOC6BQ9Y2D4 811 aa12.43□□□□□ -0.42
PDGFRB-205ENST00000519575 CCDC9Q9Y3X0 531 aaKnown RBP12.43□□□□□ -0.42
PDGFRB-205ENST00000519575 NUTM2BA6NNL0 878 aaPredicted RBP12.42□□□□□ -0.42
PDGFRB-205ENST00000519575 NUTM2EB1AL46 878 aaPredicted RBP12.42□□□□□ -0.42
PDGFRB-205ENST00000519575 EPB41L2O43491 1005 aaKnown RBP12.42□□□□□ -0.42
PDGFRB-205ENST00000519575 PTCD1O75127 700 aaKnown RBP12.42□□□□□ -0.42
PDGFRB-205ENST00000519575 PDE1AP54750 535 aa12.42□□□□□ -0.42
PDGFRB-205ENST00000519575 CWF19L2Q2TBE0 894 aaKnown RBP12.42□□□□□ -0.42
PDGFRB-205ENST00000519575 AEBP2Q6ZN18 517 aaPredicted RBP12.42□□□□□ -0.42
PDGFRB-205ENST00000519575 NUTM2AQ8IVF1 878 aaPredicted RBP12.42□□□□□ -0.42
PDGFRB-205ENST00000519575 RHPN1Q8TCX5 695 aa12.42□□□□□ -0.42
PDGFRB-205ENST00000519575 C22orf23Q9BZE7 217 aa12.42□□□□□ -0.42
PDGFRB-205ENST00000519575 CWC25Q9NXE8 425 aaPredicted RBP12.42□□□□□ -0.42
PDGFRB-205ENST00000519575 IGKV5-2P06315 115 aa12.41□□□□□ -0.42
PDGFRB-205ENST00000519575 HSP90B1P14625 803 aaKnown RBP12.41□□□□□ -0.42
PDGFRB-205ENST00000519575 HMGB2P26583 209 aaKnown RBP12.41□□□□□ -0.42
PDGFRB-205ENST00000519575 RBM25P49756 843 aaKnown RBP12.41□□□□□ -0.42
PDGFRB-205ENST00000519575 MFAP1P55081 439 aaKnown RBP12.41□□□□□ -0.42
PDGFRB-205ENST00000519575 TJP1Q07157 1748 aa12.41□□□□□ -0.42
PDGFRB-205ENST00000519575 TRIM28Q13263 835 aaKnown RBP12.41□□□□□ -0.42
PDGFRB-205ENST00000519575 G3BP1Q13283 466 aaKnown RBP eCLIP12.41□□□□□ -0.42
PDGFRB-205ENST00000519575 NGLY1Q96IV0 654 aa12.41□□□□□ -0.42
PDGFRB-205ENST00000519575 ATG3Q9NT62 314 aa12.41□□□□□ -0.42
PDGFRB-205ENST00000519575 USP42Q9H9J4 1324 aaKnown RBP12.4□□□□□ -0.42
PDGFRB-205ENST00000519575 APBB1O00213 710 aa12.4□□□□□ -0.42
PDGFRB-205ENST00000519575 TBC1D9Q6ZT07 1266 aa12.4□□□□□ -0.42
PDGFRB-205ENST00000519575 FNBP4Q8N3X1 1017 aaPredicted RBP12.4□□□□□ -0.42
PDGFRB-205ENST00000519575 CERKQ8TCT0 537 aa12.4□□□□□ -0.42
PDGFRB-205ENST00000519575 RBM42Q9BTD8 480 aaKnown RBP12.4□□□□□ -0.42
PDGFRB-205ENST00000519575 RREB1Q92766 1687 aa12.4□□□□□ -0.42
PDGFRB-205ENST00000519575 SALL3Q9BXA9 1300 aa12.39□□□□□ -0.43
PDGFRB-205ENST00000519575 NBPF26B4DH59 902 aa12.39□□□□□ -0.43
PDGFRB-205ENST00000519575 RGL2O15211 777 aa12.39□□□□□ -0.43
PDGFRB-205ENST00000519575 GLRX3O76003 335 aaKnown RBP12.39□□□□□ -0.43
PDGFRB-205ENST00000519575 RABL6Q3YEC7 729 aaPredicted RBP12.39□□□□□ -0.43
PDGFRB-205ENST00000519575 NBPF14Q5TI25 921 aa12.39□□□□□ -0.43
PDGFRB-205ENST00000519575 NBPF10Q6P3W6 841 aaKnown RBP12.39□□□□□ -0.43
PDGFRB-205ENST00000519575 NBPF15Q8N660 670 aa12.39□□□□□ -0.43
PDGFRB-205ENST00000519575 BICC1Q9H694 974 aaKnown RBP12.39□□□□□ -0.43
PDGFRB-205ENST00000519575 FBXO3Q9UK99 471 aa12.39□□□□□ -0.43
PDGFRB-205ENST00000519575 THSD7AQ9UPZ6 1657 aa12.38□□□□□ -0.43
PDGFRB-205ENST00000519575 A0A087WZG4 1122 aa12.38□□□□□ -0.43
PDGFRB-205ENST00000519575 ERVV-1B6SEH8 477 aa12.38□□□□□ -0.43
PDGFRB-205ENST00000519575 SMARCA5O60264 1052 aaPredicted RBP12.38□□□□□ -0.43
PDGFRB-205ENST00000519575 IFIT2P09913 472 aaKnown RBP12.38□□□□□ -0.43
PDGFRB-205ENST00000519575 GSPT1P15170 499 aaKnown RBP12.38□□□□□ -0.43
PDGFRB-205ENST00000519575 IL6STP40189 918 aaPredicted RBP12.38□□□□□ -0.43
PDGFRB-205ENST00000519575 TICAM2Q86XR7 235 aa12.38□□□□□ -0.43
PDGFRB-205ENST00000519575 SYTL4Q96C24 671 aaPredicted RBP12.38□□□□□ -0.43
PDGFRB-205ENST00000519575 SUCLG2Q96I99 432 aa12.38□□□□□ -0.43
PDGFRB-205ENST00000519575 COPRSQ9NQ92 184 aa12.38□□□□□ -0.43
PDGFRB-205ENST00000519575 ASAP1Q9ULH1 1129 aa12.38□□□□□ -0.43
PDGFRB-205ENST00000519575 BCL9LQ86UU0 1499 aa12.38□□□□□ -0.43
PDGFRB-205ENST00000519575 MAP3K15Q6ZN16 1313 aa12.37□□□□□ -0.43
PDGFRB-205ENST00000519575 MYH3P11055 1940 aa12.37□□□□□ -0.43
PDGFRB-205ENST00000519575 H7C1W4 665 aa12.37□□□□□ -0.43
PDGFRB-205ENST00000519575 HIP1O00291 1037 aa12.37□□□□□ -0.43
PDGFRB-205ENST00000519575 SDSP20132 328 aa12.37□□□□□ -0.43
PDGFRB-205ENST00000519575 MCCP23508 829 aa12.37□□□□□ -0.43
PDGFRB-205ENST00000519575 TCIRG1Q13488 830 aa12.37□□□□□ -0.43
PDGFRB-205ENST00000519575 UBE3BQ7Z3V4 1068 aa12.37□□□□□ -0.43
PDGFRB-205ENST00000519575 CNTROBQ8N137 903 aa12.37□□□□□ -0.43
PDGFRB-205ENST00000519575 NHSQ6T4R5 1651 aa12.36□□□□□ -0.43
PDGFRB-205ENST00000519575 A1BGP04217 495 aa12.36□□□□□ -0.43
PDGFRB-205ENST00000519575 CYP19A1P11511 503 aaPredicted RBP12.36□□□□□ -0.43
PDGFRB-205ENST00000519575 PRIM1P49642 420 aaKnown RBP12.36□□□□□ -0.43
PDGFRB-205ENST00000519575 MEX3CQ5U5Q3 659 aaKnown RBP12.36□□□□□ -0.43
PDGFRB-205ENST00000519575 GIGYF2Q6Y7W6 1299 aaKnown RBP12.36□□□□□ -0.43
PDGFRB-205ENST00000519575 DNAJC10Q8IXB1 793 aa12.36□□□□□ -0.43
PDGFRB-205ENST00000519575 AK7Q96M32 723 aa12.36□□□□□ -0.43
PDGFRB-205ENST00000519575 C8orf37Q96NL8 207 aa12.36□□□□□ -0.43
PDGFRB-205ENST00000519575 NUP98P52948 1817 aa12.36□□□□□ -0.43
PDGFRB-205ENST00000519575 COL5A3P25940 1745 aaPredicted RBP12.36□□□□□ -0.43
PDGFRB-205ENST00000519575 CDHR2Q9BYE9 1310 aa12.36□□□□□ -0.43
PDGFRB-205ENST00000519575 MSH5O43196 834 aa12.35□□□□□ -0.43
PDGFRB-205ENST00000519575 SEC24BO95487 1268 aa12.35□□□□□ -0.43
PDGFRB-205ENST00000519575 PCCAP05165 728 aaPredicted RBP12.35□□□□□ -0.43
PDGFRB-205ENST00000519575 HSCBQ8IWL3 235 aa12.35□□□□□ -0.43
PDGFRB-205ENST00000519575 RUFY2Q8WXA3 655 aa12.35□□□□□ -0.43
PDGFRB-205ENST00000519575 ISCA1Q9BUE6 129 aa12.35□□□□□ -0.43
PDGFRB-205ENST00000519575 ECHDC1Q9NTX5 307 aa12.35□□□□□ -0.43
PDGFRB-205ENST00000519575 USP21Q9UK80 565 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms