RNA–Protein interactions for RNA: ENST00000518359.5

TMEM55A-202, humanhuman

TSL 3

Gene TMEM55A, Length 867 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55A-202ENST00000518359 TEFQ10587 303 aa15.84■□□□□ 0.13
TMEM55A-202ENST00000518359 TAF1DQ9H5J8 278 aaPredicted RBP15.84■□□□□ 0.13
TMEM55A-202ENST00000518359 VEGFBP49765 207 aa15.83■□□□□ 0.12
TMEM55A-202ENST00000518359 CCDC93Q567U6 631 aa15.83■□□□□ 0.12
TMEM55A-202ENST00000518359 ZNF790Q6PG37 636 aa15.83■□□□□ 0.12
TMEM55A-202ENST00000518359 ZNF496Q96IT1 587 aaPredicted RBP15.83■□□□□ 0.12
TMEM55A-202ENST00000518359 ADAMTSL1Q8N6G6 1762 aa15.82■□□□□ 0.12
TMEM55A-202ENST00000518359 HSPA5P11021 654 aaKnown RBP15.82■□□□□ 0.12
TMEM55A-202ENST00000518359 EAPPQ56P03 285 aaPredicted RBP15.82■□□□□ 0.12
TMEM55A-202ENST00000518359 WBP1LQ9NX94 342 aa15.82■□□□□ 0.12
TMEM55A-202ENST00000518359 CLEC11AQ9Y240 323 aa15.82■□□□□ 0.12
TMEM55A-202ENST00000518359 DIAPH1O60610 1272 aaKnown RBP15.81■□□□□ 0.12
TMEM55A-202ENST00000518359 LBX1P52954 281 aa15.81■□□□□ 0.12
TMEM55A-202ENST00000518359 PNMA8AQ86V59 439 aaPredicted RBP15.81■□□□□ 0.12
TMEM55A-202ENST00000518359 FMNL2Q96PY5 1086 aa15.81■□□□□ 0.12
TMEM55A-202ENST00000518359 HACL1Q9UJ83 578 aa15.81■□□□□ 0.12
TMEM55A-202ENST00000518359 CAMTA2O94983 1202 aa15.8■□□□□ 0.12
TMEM55A-202ENST00000518359 ITGBL1O95965 494 aaPredicted RBP15.8■□□□□ 0.12
TMEM55A-202ENST00000518359 CLSPNQ9HAW4 1339 aa15.79■□□□□ 0.12
TMEM55A-202ENST00000518359 RASSF10A6NK89 507 aa15.79■□□□□ 0.12
TMEM55A-202ENST00000518359 GNAT3A8MTJ3 354 aa15.79■□□□□ 0.12
TMEM55A-202ENST00000518359 SLC34A2O95436 690 aa15.79■□□□□ 0.12
TMEM55A-202ENST00000518359 NPR1P16066 1061 aa15.79■□□□□ 0.12
TMEM55A-202ENST00000518359 MAP2K1Q02750 393 aaPredicted RBP15.79■□□□□ 0.12
TMEM55A-202ENST00000518359 FKBP4Q02790 459 aaKnown RBP eCLIP15.79■□□□□ 0.12
TMEM55A-202ENST00000518359 DEFB115Q30KQ5 88 aa15.79■□□□□ 0.12
TMEM55A-202ENST00000518359 NBPF5PQ86XG9 351 aaPredicted RBP15.79■□□□□ 0.12
TMEM55A-202ENST00000518359 DZIP3Q86Y13 1208 aaKnown RBP15.79■□□□□ 0.12
TMEM55A-202ENST00000518359 GAS2L2Q8NHY3 880 aa15.79■□□□□ 0.12
TMEM55A-202ENST00000518359 ZNF652Q9Y2D9 606 aa15.79■□□□□ 0.12
TMEM55A-202ENST00000518359 ZNF541Q9H0D2 1346 aa15.78■□□□□ 0.12
TMEM55A-202ENST00000518359 EPHX2P34913 555 aa15.78■□□□□ 0.12
TMEM55A-202ENST00000518359 AMER1Q5JTC6 1135 aaPredicted RBP15.78■□□□□ 0.12
TMEM55A-202ENST00000518359 RTKN2Q8IZC4 609 aa15.78■□□□□ 0.12
TMEM55A-202ENST00000518359 A1BGP04217 495 aa15.77■□□□□ 0.12
TMEM55A-202ENST00000518359 CLEC4GQ6UXB4 293 aa15.77■□□□□ 0.12
TMEM55A-202ENST00000518359 C7orf43Q8WVR3 580 aa15.77■□□□□ 0.12
TMEM55A-202ENST00000518359 ABHD8Q96I13 439 aa15.77■□□□□ 0.12
TMEM55A-202ENST00000518359 ZNF277Q9NRM2 450 aaPredicted RBP15.77■□□□□ 0.12
TMEM55A-202ENST00000518359 ABT1Q9ULW3 272 aaKnown RBP15.77■□□□□ 0.12
TMEM55A-202ENST00000518359 WDR33Q9C0J8 1336 aaKnown RBP15.76■□□□□ 0.11
TMEM55A-202ENST00000518359 HSPA8P11142 646 aaKnown RBP15.76■□□□□ 0.11
TMEM55A-202ENST00000518359 CNTROBQ8N137 903 aa15.76■□□□□ 0.11
TMEM55A-202ENST00000518359 IL17REQ8NFR9 667 aa15.76■□□□□ 0.11
TMEM55A-202ENST00000518359 TRPM7Q96QT4 1865 aa15.76■□□□□ 0.11
TMEM55A-202ENST00000518359 THSD7BQ9C0I4 1608 aa15.76■□□□□ 0.11
TMEM55A-202ENST00000518359 RNF123Q5XPI4 1314 aa15.75■□□□□ 0.11
TMEM55A-202ENST00000518359 TRIM26Q12899 539 aaPredicted RBP15.75■□□□□ 0.11
TMEM55A-202ENST00000518359 MAP1SQ66K74 1059 aaPredicted RBP15.75■□□□□ 0.11
TMEM55A-202ENST00000518359 TPTE2Q6XPS3 522 aa15.75■□□□□ 0.11
TMEM55A-202ENST00000518359 GPC2Q8N158 579 aa15.75■□□□□ 0.11
TMEM55A-202ENST00000518359 BEGAINQ9BUH8 593 aa15.75■□□□□ 0.11
TMEM55A-202ENST00000518359 ALDH1B1P30837 517 aa15.74■□□□□ 0.11
TMEM55A-202ENST00000518359 IARSP41252 1262 aaKnown RBP15.74■□□□□ 0.11
TMEM55A-202ENST00000518359 FAM161AQ3B820 660 aa15.74■□□□□ 0.11
TMEM55A-202ENST00000518359 JDP2Q8WYK2 163 aa15.74■□□□□ 0.11
TMEM55A-202ENST00000518359 KLRG2A4D1S0 409 aaPredicted RBP15.73■□□□□ 0.11
TMEM55A-202ENST00000518359 BTBD11A6QL63 1104 aa15.73■□□□□ 0.11
TMEM55A-202ENST00000518359 FZD9O00144 591 aa15.73■□□□□ 0.11
TMEM55A-202ENST00000518359 U2SURPO15042 1029 aaKnown RBP15.73■□□□□ 0.11
TMEM55A-202ENST00000518359 RGL2O15211 777 aa15.73■□□□□ 0.11
TMEM55A-202ENST00000518359 CEMIPQ8WUJ3 1361 aa15.73■□□□□ 0.11
TMEM55A-202ENST00000518359 LMOD1P29536 600 aaPredicted RBP15.72■□□□□ 0.11
TMEM55A-202ENST00000518359 ECE1P42892 770 aa15.72■□□□□ 0.11
TMEM55A-202ENST00000518359 NIP7Q9Y221 180 aaKnown RBP eCLIP15.72■□□□□ 0.11
TMEM55A-202ENST00000518359 COL3A1P02461 1466 aaPredicted RBP15.71■□□□□ 0.11
TMEM55A-202ENST00000518359 EIF6P56537 245 aaKnown RBP15.71■□□□□ 0.11
TMEM55A-202ENST00000518359 MLLT1Q03111 559 aaPredicted RBP15.71■□□□□ 0.11
TMEM55A-202ENST00000518359 PAXIP1Q6ZW49 1069 aaPredicted RBP15.71■□□□□ 0.11
TMEM55A-202ENST00000518359 SYNE4Q8N205 404 aa15.71■□□□□ 0.11
TMEM55A-202ENST00000518359 DDX21Q9NR30 783 aaKnown RBP eCLIP15.71■□□□□ 0.11
TMEM55A-202ENST00000518359 GTF2E1P29083 439 aaPredicted RBP15.7■□□□□ 0.1
TMEM55A-202ENST00000518359 OLFM4Q6UX06 510 aa15.7■□□□□ 0.1
TMEM55A-202ENST00000518359 PSMD1Q99460 953 aa15.7■□□□□ 0.1
TMEM55A-202ENST00000518359 USP16Q9Y5T5 823 aa15.7■□□□□ 0.1
TMEM55A-202ENST00000518359 LAMB4A4D0S4 1761 aa15.7■□□□□ 0.1
TMEM55A-202ENST00000518359 CCDC85CA6NKD9 419 aa15.69■□□□□ 0.1
TMEM55A-202ENST00000518359 SNRPA1P09661 255 aaKnown RBP15.69■□□□□ 0.1
TMEM55A-202ENST00000518359 PIP4K2AP48426 406 aaPredicted RBP15.69■□□□□ 0.1
TMEM55A-202ENST00000518359 CC2D1BQ5T0F9 858 aaKnown RBP15.69■□□□□ 0.1
TMEM55A-202ENST00000518359 CC2D2BQ6DHV5 1058 aa15.69■□□□□ 0.1
TMEM55A-202ENST00000518359 CAPNS2Q96L46 248 aa15.69■□□□□ 0.1
TMEM55A-202ENST00000518359 GJA3Q9Y6H8 435 aa15.69■□□□□ 0.1
TMEM55A-202ENST00000518359 FAM177BA6PVY3 158 aa15.68■□□□□ 0.1
TMEM55A-202ENST00000518359 KCNQ3O43525 872 aa15.68■□□□□ 0.1
TMEM55A-202ENST00000518359 NUP98P52948 1817 aa15.68■□□□□ 0.1
TMEM55A-202ENST00000518359 LTBP1Q14766 1721 aa15.68■□□□□ 0.1
TMEM55A-202ENST00000518359 GRM1Q13255 1194 aa15.67■□□□□ 0.1
TMEM55A-202ENST00000518359 GRIPAP1Q4V328 841 aa15.67■□□□□ 0.1
TMEM55A-202ENST00000518359 GPR101Q96P66 508 aaPredicted RBP15.67■□□□□ 0.1
TMEM55A-202ENST00000518359 NYXQ9GZU5 481 aa15.67■□□□□ 0.1
TMEM55A-202ENST00000518359 SNED1Q8TER0 1413 aa15.67■□□□□ 0.1
TMEM55A-202ENST00000518359 USP50Q70EL3 339 aaPredicted RBP15.66■□□□□ 0.1
TMEM55A-202ENST00000518359 KIF7Q2M1P5 1343 aa15.66■□□□□ 0.1
TMEM55A-202ENST00000518359 PRAMEF22A3QJZ6 481 aa15.65■□□□□ 0.1
TMEM55A-202ENST00000518359 RGS19P49795 217 aa15.65■□□□□ 0.1
TMEM55A-202ENST00000518359 CYP4F22Q6NT55 531 aa15.65■□□□□ 0.1
TMEM55A-202ENST00000518359 RTF1Q92541 710 aaKnown RBP15.65■□□□□ 0.1
TMEM55A-202ENST00000518359 RPGRQ92834 1020 aaKnown RBP15.65■□□□□ 0.1
TMEM55A-202ENST00000518359 PCGF6Q9BYE7 350 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms