RNA–Protein interactions for RNA: ENST00000517352.1

TNFRSF11B-202, Transcript of TNF receptor superfamily member 11b, humanhuman

TSL 1 (best)

Gene TNFRSF11B, Length 1,144 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-202ENST00000517352 CLEC11AQ9Y240 323 aa9.78□□□□□ -0.84
TNFRSF11B-202ENST00000517352 N4BP2Q86UW6 1770 aaPredicted RBP9.78□□□□□ -0.84
TNFRSF11B-202ENST00000517352 IQCA1LA6NCM1 817 aa9.77□□□□□ -0.85
TNFRSF11B-202ENST00000517352 PRR5LQ6MZQ0 368 aa9.77□□□□□ -0.85
TNFRSF11B-202ENST00000517352 POTEHQ6S545 545 aa9.77□□□□□ -0.85
TNFRSF11B-202ENST00000517352 ERICH6Q7L0X2 663 aa9.77□□□□□ -0.85
TNFRSF11B-202ENST00000517352 TNS4Q8IZW8 715 aa9.77□□□□□ -0.85
TNFRSF11B-202ENST00000517352 NGEFQ8N5V2 710 aa9.77□□□□□ -0.85
TNFRSF11B-202ENST00000517352 DNAJC5GQ8N7S2 189 aa9.77□□□□□ -0.85
TNFRSF11B-202ENST00000517352 MASTLQ96GX5 879 aa9.77□□□□□ -0.85
TNFRSF11B-202ENST00000517352 BCL2L12Q9HB09 334 aa9.77□□□□□ -0.85
TNFRSF11B-202ENST00000517352 PER1O15534 1290 aaPredicted RBP9.76□□□□□ -0.85
TNFRSF11B-202ENST00000517352 EAPPQ56P03 285 aaPredicted RBP9.76□□□□□ -0.85
TNFRSF11B-202ENST00000517352 STYK1Q6J9G0 422 aa9.76□□□□□ -0.85
TNFRSF11B-202ENST00000517352 MCM10Q7L590 875 aa9.76□□□□□ -0.85
TNFRSF11B-202ENST00000517352 PNNQ9H307 717 aaKnown RBP9.76□□□□□ -0.85
TNFRSF11B-202ENST00000517352 NIP7Q9Y221 180 aaKnown RBP eCLIP9.76□□□□□ -0.85
TNFRSF11B-202ENST00000517352 ZNF831Q5JPB2 1677 aa9.75□□□□□ -0.85
TNFRSF11B-202ENST00000517352 NFKBIEO00221 500 aa9.75□□□□□ -0.85
TNFRSF11B-202ENST00000517352 NPR1P16066 1061 aa9.75□□□□□ -0.85
TNFRSF11B-202ENST00000517352 ALDH1B1P30837 517 aa9.75□□□□□ -0.85
TNFRSF11B-202ENST00000517352 PIP4K2AP48426 406 aaPredicted RBP9.75□□□□□ -0.85
TNFRSF11B-202ENST00000517352 TPRNQ4KMQ1 711 aa9.75□□□□□ -0.85
TNFRSF11B-202ENST00000517352 CCDC93Q567U6 631 aa9.75□□□□□ -0.85
TNFRSF11B-202ENST00000517352 PRPF40BQ6NWY9 871 aaKnown RBP9.75□□□□□ -0.85
TNFRSF11B-202ENST00000517352 KIF6Q6ZMV9 814 aa9.75□□□□□ -0.85
TNFRSF11B-202ENST00000517352 AIDAQ96BJ3 306 aa9.75□□□□□ -0.85
TNFRSF11B-202ENST00000517352 PHACTR3Q96KR7 559 aa9.75□□□□□ -0.85
TNFRSF11B-202ENST00000517352 TAF7Q15545 349 aaPredicted RBP9.74□□□□□ -0.85
TNFRSF11B-202ENST00000517352 CHADLQ6NUI6 762 aa9.74□□□□□ -0.85
TNFRSF11B-202ENST00000517352 CLEC4GQ6UXB4 293 aa9.74□□□□□ -0.85
TNFRSF11B-202ENST00000517352 PNISRQ8TF01 805 aaKnown RBP9.74□□□□□ -0.85
TNFRSF11B-202ENST00000517352 JDP2Q8WYK2 163 aa9.74□□□□□ -0.85
TNFRSF11B-202ENST00000517352 RPGRQ92834 1020 aaKnown RBP9.74□□□□□ -0.85
TNFRSF11B-202ENST00000517352 USP16Q9Y5T5 823 aa9.74□□□□□ -0.85
TNFRSF11B-202ENST00000517352 MAPK8IP3Q9UPT6 1336 aa9.74□□□□□ -0.85
TNFRSF11B-202ENST00000517352 COL5A3P25940 1745 aaPredicted RBP9.73□□□□□ -0.85
TNFRSF11B-202ENST00000517352 KCNQ3O43525 872 aa9.73□□□□□ -0.85
TNFRSF11B-202ENST00000517352 DDNO94850 711 aaPredicted RBP9.73□□□□□ -0.85
TNFRSF11B-202ENST00000517352 CAMTA2O94983 1202 aa9.73□□□□□ -0.85
TNFRSF11B-202ENST00000517352 SRGNP10124 158 aa9.73□□□□□ -0.85
TNFRSF11B-202ENST00000517352 RTKN2Q8IZC4 609 aa9.73□□□□□ -0.85
TNFRSF11B-202ENST00000517352 NYXQ9GZU5 481 aa9.73□□□□□ -0.85
TNFRSF11B-202ENST00000517352 RSPH6AQ9H0K4 717 aa9.73□□□□□ -0.85
TNFRSF11B-202ENST00000517352 MKRN1Q9UHC7 482 aaKnown RBP9.73□□□□□ -0.85
TNFRSF11B-202ENST00000517352 RRP7AQ9Y3A4 280 aaKnown RBP9.73□□□□□ -0.85
TNFRSF11B-202ENST00000517352 HTATSF1O43719 755 aaKnown RBP9.72□□□□□ -0.85
TNFRSF11B-202ENST00000517352 HSPA1AP0DMV8 641 aaKnown RBP9.72□□□□□ -0.85
TNFRSF11B-202ENST00000517352 HSPA1BP0DMV9 641 aaKnown RBP9.72□□□□□ -0.85
TNFRSF11B-202ENST00000517352 LMOD1P29536 600 aaPredicted RBP9.72□□□□□ -0.85
TNFRSF11B-202ENST00000517352 PPP2R1AP30153 589 aa9.72□□□□□ -0.85
TNFRSF11B-202ENST00000517352 DCTN1Q14203 1278 aa9.72□□□□□ -0.85
TNFRSF11B-202ENST00000517352 COL13A1Q5TAT6 717 aaPredicted RBP9.72□□□□□ -0.85
TNFRSF11B-202ENST00000517352 JMYQ8N9B5 988 aa9.72□□□□□ -0.85
TNFRSF11B-202ENST00000517352 MIS18AQ9NYP9 233 aa9.72□□□□□ -0.85
TNFRSF11B-202ENST00000517352 NPC1L1Q9UHC9 1359 aa9.72□□□□□ -0.85
TNFRSF11B-202ENST00000517352 KIF13BQ9NQT8 1826 aa9.71□□□□□ -0.85
TNFRSF11B-202ENST00000517352 TCERG1O14776 1098 aaKnown RBP9.71□□□□□ -0.86
TNFRSF11B-202ENST00000517352 MYL6BP14649 208 aa9.71□□□□□ -0.86
TNFRSF11B-202ENST00000517352 EIF6P56537 245 aaKnown RBP9.71□□□□□ -0.86
TNFRSF11B-202ENST00000517352 PLCB2Q00722 1185 aa9.71□□□□□ -0.86
TNFRSF11B-202ENST00000517352 PAXIP1Q6ZW49 1069 aaPredicted RBP9.71□□□□□ -0.86
TNFRSF11B-202ENST00000517352 PNMA8AQ86V59 439 aaPredicted RBP9.71□□□□□ -0.86
TNFRSF11B-202ENST00000517352 HACL1Q9UJ83 578 aa9.71□□□□□ -0.86
TNFRSF11B-202ENST00000517352 GJA3Q9Y6H8 435 aa9.71□□□□□ -0.86
TNFRSF11B-202ENST00000517352 MRC1P22897 1456 aa9.71□□□□□ -0.86
TNFRSF11B-202ENST00000517352 MYH14Q7Z406 1995 aaKnown RBP9.7□□□□□ -0.86
TNFRSF11B-202ENST00000517352 FKBP4Q02790 459 aaKnown RBP eCLIP9.7□□□□□ -0.86
TNFRSF11B-202ENST00000517352 LDHDQ86WU2 507 aa9.7□□□□□ -0.86
TNFRSF11B-202ENST00000517352 ZNF277Q9NRM2 450 aaPredicted RBP9.7□□□□□ -0.86
TNFRSF11B-202ENST00000517352 CREBZFQ9NS37 354 aa9.7□□□□□ -0.86
TNFRSF11B-202ENST00000517352 LTBP3Q9NS15 1303 aa9.7□□□□□ -0.86
TNFRSF11B-202ENST00000517352 TJP1Q07157 1748 aa9.7□□□□□ -0.86
TNFRSF11B-202ENST00000517352 PRAMEF22A3QJZ6 481 aa9.69□□□□□ -0.86
TNFRSF11B-202ENST00000517352 GPTP24298 496 aa9.69□□□□□ -0.86
TNFRSF11B-202ENST00000517352 SYNE4Q8N205 404 aa9.69□□□□□ -0.86
TNFRSF11B-202ENST00000517352 RBM17Q96I25 401 aaKnown RBP9.69□□□□□ -0.86
TNFRSF11B-202ENST00000517352 BEGAINQ9BUH8 593 aa9.69□□□□□ -0.86
TNFRSF11B-202ENST00000517352 SCN11AQ9UI33 1791 aa9.69□□□□□ -0.86
TNFRSF11B-202ENST00000517352 ABT1Q9ULW3 272 aaKnown RBP9.69□□□□□ -0.86
TNFRSF11B-202ENST00000517352 CEMIPQ8WUJ3 1361 aa9.68□□□□□ -0.86
TNFRSF11B-202ENST00000517352 TMEM88BA6NKF7 163 aa9.68□□□□□ -0.86
TNFRSF11B-202ENST00000517352 EPHX2P34913 555 aa9.68□□□□□ -0.86
TNFRSF11B-202ENST00000517352 IARSP41252 1262 aaKnown RBP9.68□□□□□ -0.86
TNFRSF11B-202ENST00000517352 PRELPP51888 382 aa9.68□□□□□ -0.86
TNFRSF11B-202ENST00000517352 GRM1Q13255 1194 aa9.68□□□□□ -0.86
TNFRSF11B-202ENST00000517352 CC2D2BQ6DHV5 1058 aa9.68□□□□□ -0.86
TNFRSF11B-202ENST00000517352 PPP1R42Q7Z4L9 355 aa9.68□□□□□ -0.86
TNFRSF11B-202ENST00000517352 LARGE2Q8N3Y3 721 aa9.68□□□□□ -0.86
TNFRSF11B-202ENST00000517352 ZBTB3Q9H5J0 574 aa9.68□□□□□ -0.86
TNFRSF11B-202ENST00000517352 TAF1DQ9H5J8 278 aaPredicted RBP9.68□□□□□ -0.86
TNFRSF11B-202ENST00000517352 TSPYL4Q9UJ04 414 aa9.68□□□□□ -0.86
TNFRSF11B-202ENST00000517352 EIF2S2P20042 333 aaKnown RBP9.67□□□□□ -0.86
TNFRSF11B-202ENST00000517352 HLFQ16534 295 aa9.67□□□□□ -0.86
TNFRSF11B-202ENST00000517352 GRIPAP1Q4V328 841 aa9.67□□□□□ -0.86
TNFRSF11B-202ENST00000517352 NUTM1Q86Y26 1132 aa9.67□□□□□ -0.86
TNFRSF11B-202ENST00000517352 NLRP3Q96P20 1036 aa9.67□□□□□ -0.86
TNFRSF11B-202ENST00000517352 ARFGEF1Q9Y6D6 1849 aa9.67□□□□□ -0.86
TNFRSF11B-202ENST00000517352 KIAA1551Q9HCM1 1747 aa9.66□□□□□ -0.86
TNFRSF11B-202ENST00000517352 ERVV-1B6SEH8 477 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms