RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 CFAP99D6REC4 459 aa1.52□□□□□ -2.17
RNU6-542P-201ENST00000516405 KHNYNO15037 678 aaKnown RBP1.52□□□□□ -2.17
RNU6-542P-201ENST00000516405 C1QTNF9P0C862 333 aa1.52□□□□□ -2.17
RNU6-542P-201ENST00000516405 SKIP12755 728 aa1.52□□□□□ -2.17
RNU6-542P-201ENST00000516405 AFF1P51825 1210 aaKnown RBP1.52□□□□□ -2.17
RNU6-542P-201ENST00000516405 CLN3Q13286 438 aa1.52□□□□□ -2.17
RNU6-542P-201ENST00000516405 MTMR2Q13614 643 aa1.52□□□□□ -2.17
RNU6-542P-201ENST00000516405 ARMC10Q8N2F6 343 aa1.52□□□□□ -2.17
RNU6-542P-201ENST00000516405 UBL7Q96S82 380 aaPredicted RBP1.52□□□□□ -2.17
RNU6-542P-201ENST00000516405 C7orf69Q9H7B7 122 aa1.52□□□□□ -2.17
RNU6-542P-201ENST00000516405 PARD6AQ9NPB6 346 aa1.52□□□□□ -2.17
RNU6-542P-201ENST00000516405 PCSK5Q92824 1860 aa1.52□□□□□ -2.17
RNU6-542P-201ENST00000516405 LRRC10BA6NIK2 292 aa1.51□□□□□ -2.17
RNU6-542P-201ENST00000516405 BIN1O00499 593 aa1.51□□□□□ -2.17
RNU6-542P-201ENST00000516405 SOCS7O14512 581 aa1.51□□□□□ -2.17
RNU6-542P-201ENST00000516405 NDUFV2P19404 249 aa1.51□□□□□ -2.17
RNU6-542P-201ENST00000516405 ADH7P40394 386 aa1.51□□□□□ -2.17
RNU6-542P-201ENST00000516405 C4orf17Q53FE4 359 aa1.51□□□□□ -2.17
RNU6-542P-201ENST00000516405 Q6ZS46 218 aa1.51□□□□□ -2.17
RNU6-542P-201ENST00000516405 VSIG10LQ86VR7 867 aa1.51□□□□□ -2.17
RNU6-542P-201ENST00000516405 ARMC2Q8NEN0 867 aa1.51□□□□□ -2.17
RNU6-542P-201ENST00000516405 SORCS2Q96PQ0 1159 aa1.51□□□□□ -2.17
RNU6-542P-201ENST00000516405 F8W735 103 aaPredicted RBP1.5□□□□□ -2.17
RNU6-542P-201ENST00000516405 KRTAP10-6P60371 365 aaPredicted RBP1.5□□□□□ -2.17
RNU6-542P-201ENST00000516405 NLRP8Q86W28 1048 aa1.5□□□□□ -2.17
RNU6-542P-201ENST00000516405 TMEM130Q8N3G9 435 aa1.5□□□□□ -2.17
RNU6-542P-201ENST00000516405 SLC16A11Q8NCK7 471 aa1.5□□□□□ -2.17
RNU6-542P-201ENST00000516405 AGBL5Q8NDL9 886 aa1.5□□□□□ -2.17
RNU6-542P-201ENST00000516405 GLIS3Q8NEA6 775 aa1.5□□□□□ -2.17
RNU6-542P-201ENST00000516405 NTN5Q8WTR8 489 aaPredicted RBP1.5□□□□□ -2.17
RNU6-542P-201ENST00000516405 OCSTAMPQ9BR26 566 aa1.5□□□□□ -2.17
RNU6-542P-201ENST00000516405 SPDYE5A6NIY4 337 aa1.49□□□□□ -2.17
RNU6-542P-201ENST00000516405 WDR64B1ANS9 1081 aa1.49□□□□□ -2.17
RNU6-542P-201ENST00000516405 GNPATO15228 680 aa1.49□□□□□ -2.17
RNU6-542P-201ENST00000516405 DHX15O43143 795 aaKnown RBP1.49□□□□□ -2.17
RNU6-542P-201ENST00000516405 DEAF1O75398 565 aaPredicted RBP1.49□□□□□ -2.17
RNU6-542P-201ENST00000516405 HOXD8P13378 290 aaPredicted RBP1.49□□□□□ -2.17
RNU6-542P-201ENST00000516405 NFIXQ14938 502 aa1.49□□□□□ -2.17
RNU6-542P-201ENST00000516405 CRB2Q5IJ48 1285 aa1.49□□□□□ -2.17
RNU6-542P-201ENST00000516405 ATG4DQ86TL0 474 aaPredicted RBP1.49□□□□□ -2.17
RNU6-542P-201ENST00000516405 CXorf38Q8TB03 319 aa1.49□□□□□ -2.17
RNU6-542P-201ENST00000516405 NUDT8Q8WV74 236 aa1.49□□□□□ -2.17
RNU6-542P-201ENST00000516405 JPH1Q9HDC5 661 aaPredicted RBP1.49□□□□□ -2.17
RNU6-542P-201ENST00000516405 MARK1Q9P0L2 795 aa1.49□□□□□ -2.17
RNU6-542P-201ENST00000516405 PIM2Q9P1W9 311 aa1.49□□□□□ -2.17
RNU6-542P-201ENST00000516405 KRTAP29-1A8MX34 341 aaPredicted RBP1.48□□□□□ -2.17
RNU6-542P-201ENST00000516405 NPIPB6E9PJ23 425 aa1.48□□□□□ -2.17
RNU6-542P-201ENST00000516405 DLL1O00548 723 aa1.48□□□□□ -2.17
RNU6-542P-201ENST00000516405 EFSO43281 561 aa1.48□□□□□ -2.17
RNU6-542P-201ENST00000516405 ATP4AP20648 1035 aa1.48□□□□□ -2.17
RNU6-542P-201ENST00000516405 HMGA2P52926 109 aa1.48□□□□□ -2.17
RNU6-542P-201ENST00000516405 ZXDAP98168 799 aa1.48□□□□□ -2.17
RNU6-542P-201ENST00000516405 CENPCQ03188 943 aa1.48□□□□□ -2.17
RNU6-542P-201ENST00000516405 MLANAQ16655 118 aa1.48□□□□□ -2.17
RNU6-542P-201ENST00000516405 ZNF792Q3KQV3 632 aa1.48□□□□□ -2.17
RNU6-542P-201ENST00000516405 MSL1Q68DK7 614 aa1.48□□□□□ -2.17
RNU6-542P-201ENST00000516405 SYDE1Q6ZW31 735 aaPredicted RBP1.48□□□□□ -2.17
RNU6-542P-201ENST00000516405 NUTM1Q86Y26 1132 aa1.48□□□□□ -2.17
RNU6-542P-201ENST00000516405 AGGF1Q8N302 714 aaeCLIP1.48□□□□□ -2.17
RNU6-542P-201ENST00000516405 DTWD1Q8N5C7 304 aa1.48□□□□□ -2.17
RNU6-542P-201ENST00000516405 FLCNQ8NFG4 579 aa1.48□□□□□ -2.17
RNU6-542P-201ENST00000516405 PPP1R16BQ96T49 567 aa1.48□□□□□ -2.17
RNU6-542P-201ENST00000516405 SLC30A3Q99726 388 aa1.48□□□□□ -2.17
RNU6-542P-201ENST00000516405 ARHGAP9Q9BRR9 750 aa1.48□□□□□ -2.17
RNU6-542P-201ENST00000516405 CNTNAP4Q9C0A0 1308 aa1.47□□□□□ -2.17
RNU6-542P-201ENST00000516405 ZNF503-AS2A6NEH8 195 aa1.47□□□□□ -2.17
RNU6-542P-201ENST00000516405 MOXD2PA6NHM9 499 aa1.47□□□□□ -2.17
RNU6-542P-201ENST00000516405 ESPNB1AK53 854 aa1.47□□□□□ -2.17
RNU6-542P-201ENST00000516405 FAM157BP0CG42 384 aa1.47□□□□□ -2.17
RNU6-542P-201ENST00000516405 FOSL1P15407 271 aa1.47□□□□□ -2.17
RNU6-542P-201ENST00000516405 GLB1P16278 677 aa1.47□□□□□ -2.17
RNU6-542P-201ENST00000516405 WFDC3Q8IUB2 231 aa1.47□□□□□ -2.17
RNU6-542P-201ENST00000516405 SLC4A9Q96Q91 983 aa1.47□□□□□ -2.17
RNU6-542P-201ENST00000516405 SLITRK6Q9H5Y7 841 aa1.47□□□□□ -2.17
RNU6-542P-201ENST00000516405 ARHGEF10LQ9HCE6 1279 aa1.47□□□□□ -2.17
RNU6-542P-201ENST00000516405 MYRFQ9Y2G1 1151 aa1.47□□□□□ -2.17
RNU6-542P-201ENST00000516405 HRH3Q9Y5N1 445 aa1.47□□□□□ -2.17
RNU6-542P-201ENST00000516405 GPR37O15354 613 aa1.46□□□□□ -2.18
RNU6-542P-201ENST00000516405 FSHBP01225 129 aa1.46□□□□□ -2.18
RNU6-542P-201ENST00000516405 CELA3BP08861 270 aa1.46□□□□□ -2.18
RNU6-542P-201ENST00000516405 ATXN1P54253 815 aaKnown RBP1.46□□□□□ -2.18
RNU6-542P-201ENST00000516405 GPKOWQ92917 476 aaPredicted RBP eCLIP1.46□□□□□ -2.18
RNU6-542P-201ENST00000516405 COL26A1Q96A83 441 aa1.46□□□□□ -2.18
RNU6-542P-201ENST00000516405 FHDC1Q9C0D6 1143 aaPredicted RBP1.46□□□□□ -2.18
RNU6-542P-201ENST00000516405 ZCCHC4Q9H5U6 513 aa1.46□□□□□ -2.18
RNU6-542P-201ENST00000516405 RAB6BQ9NRW1 208 aa1.46□□□□□ -2.18
RNU6-542P-201ENST00000516405 SRRDQ9UH36 339 aa1.46□□□□□ -2.18
RNU6-542P-201ENST00000516405 A0A1W2PNR3 127 aa1.45□□□□□ -2.18
RNU6-542P-201ENST00000516405 IQCJ-SCHIP1C9J366 451 aaPredicted RBP1.45□□□□□ -2.18
RNU6-542P-201ENST00000516405 ONECUT2O95948 504 aa1.45□□□□□ -2.18
RNU6-542P-201ENST00000516405 IL2RAP01589 272 aa1.45□□□□□ -2.18
RNU6-542P-201ENST00000516405 BMP7P18075 431 aa1.45□□□□□ -2.18
RNU6-542P-201ENST00000516405 TNFRSF1AP19438 455 aa1.45□□□□□ -2.18
RNU6-542P-201ENST00000516405 GRIK5Q16478 980 aa1.45□□□□□ -2.18
RNU6-542P-201ENST00000516405 NBPF20Q3BBV1 942 aa1.45□□□□□ -2.18
RNU6-542P-201ENST00000516405 PDXDC2PQ6P474 469 aa1.45□□□□□ -2.18
RNU6-542P-201ENST00000516405 RAB44Q7Z6P3 723 aaPredicted RBP1.45□□□□□ -2.18
RNU6-542P-201ENST00000516405 ZBTB33Q86T24 672 aa1.45□□□□□ -2.18
RNU6-542P-201ENST00000516405 CNKSR1Q969H4 720 aa1.45□□□□□ -2.18
RNU6-542P-201ENST00000516405 SCAND2PQ9GZW5 306 aaPredicted RBP1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms