RNA–Protein interactions for RNA: ENST00000515710.1

TRIO-223, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 1,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-223ENST00000515710 PPP1R42Q7Z4L9 355 aa24.99■■□□□ 1.59
TRIO-223ENST00000515710 MTX1Q13505 466 aa24.98■■□□□ 1.59
TRIO-223ENST00000515710 GCKRQ14397 625 aa24.98■■□□□ 1.59
TRIO-223ENST00000515710 ACSBG1Q96GR2 724 aa24.98■■□□□ 1.59
TRIO-223ENST00000515710 TTLL7Q6ZT98 887 aa24.97■■□□□ 1.59
TRIO-223ENST00000515710 SLC4A9Q96Q91 983 aa24.97■■□□□ 1.59
TRIO-223ENST00000515710 CYP19A1P11511 503 aaPredicted RBP24.96■■□□□ 1.59
TRIO-223ENST00000515710 ARFGEF2Q9Y6D5 1785 aa24.96■■□□□ 1.59
TRIO-223ENST00000515710 AFF2P51816 1311 aa24.96■■□□□ 1.59
TRIO-223ENST00000515710 SRGAP3O43295 1099 aa24.95■■□□□ 1.58
TRIO-223ENST00000515710 SMARCC1Q92922 1105 aaPredicted RBP24.95■■□□□ 1.58
TRIO-223ENST00000515710 GJD4Q96KN9 370 aaPredicted RBP24.95■■□□□ 1.58
TRIO-223ENST00000515710 RAB11FIP3O75154 756 aa24.94■■□□□ 1.58
TRIO-223ENST00000515710 EXOC6BQ9Y2D4 811 aa24.94■■□□□ 1.58
TRIO-223ENST00000515710 SUCLG2Q96I99 432 aa24.94■■□□□ 1.58
TRIO-223ENST00000515710 LRRCC1Q9C099 1032 aa24.94■■□□□ 1.58
TRIO-223ENST00000515710 A0A0G2JS52 829 aa24.93■■□□□ 1.58
TRIO-223ENST00000515710 BMP2KLQ5H9B9 411 aa24.93■■□□□ 1.58
TRIO-223ENST00000515710 PLEKHM2Q8IWE5 1019 aa24.93■■□□□ 1.58
TRIO-223ENST00000515710 THSD7AQ9UPZ6 1657 aa24.93■■□□□ 1.58
TRIO-223ENST00000515710 HSP90AB4PQ58FF6 505 aa24.92■■□□□ 1.58
TRIO-223ENST00000515710 TRPC5Q9UL62 973 aaPredicted RBP24.92■■□□□ 1.58
TRIO-223ENST00000515710 APBB1O00213 710 aa24.92■■□□□ 1.58
TRIO-223ENST00000515710 SMARCA5O60264 1052 aaPredicted RBP24.92■■□□□ 1.58
TRIO-223ENST00000515710 COL15A1P39059 1388 aa24.91■■□□□ 1.58
TRIO-223ENST00000515710 KIF6Q6ZMV9 814 aa24.91■■□□□ 1.58
TRIO-223ENST00000515710 ATRNO75882 1429 aa24.91■■□□□ 1.58
TRIO-223ENST00000515710 ATP5J2-PTCD1G3V325 749 aa24.9■■□□□ 1.58
TRIO-223ENST00000515710 ANP32AP39687 249 aaKnown RBP24.9■■□□□ 1.58
TRIO-223ENST00000515710 KAZALD1Q96I82 304 aa24.9■■□□□ 1.58
TRIO-223ENST00000515710 NUP188Q5SRE5 1749 aa24.9■■□□□ 1.58
TRIO-223ENST00000515710 KAT6BQ8WYB5 2073 aa24.9■■□□□ 1.58
TRIO-223ENST00000515710 ONECUT3O60422 494 aaPredicted RBP24.9■■□□□ 1.58
TRIO-223ENST00000515710 SURF6O75683 361 aaKnown RBP24.9■■□□□ 1.58
TRIO-223ENST00000515710 C16orf71Q8IYS4 520 aaPredicted RBP24.9■■□□□ 1.58
TRIO-223ENST00000515710 ZBTB3Q9H5J0 574 aa24.9■■□□□ 1.58
TRIO-223ENST00000515710 CCDC191Q8NCU4 936 aa24.89■■□□□ 1.58
TRIO-223ENST00000515710 NOP58Q9Y2X3 529 aaKnown RBP24.89■■□□□ 1.58
TRIO-223ENST00000515710 TJP1Q07157 1748 aa24.89■■□□□ 1.57
TRIO-223ENST00000515710 A0A087WZG4 1122 aa24.88■■□□□ 1.57
TRIO-223ENST00000515710 LOC102724428A0A0B4J2F2 783 aa24.88■■□□□ 1.57
TRIO-223ENST00000515710 SIK1P57059 783 aa24.88■■□□□ 1.57
TRIO-223ENST00000515710 BICC1Q9H694 974 aaKnown RBP24.88■■□□□ 1.57
TRIO-223ENST00000515710 CWC25Q9NXE8 425 aaPredicted RBP24.88■■□□□ 1.57
TRIO-223ENST00000515710 KCNQ2O43526 872 aa24.88■■□□□ 1.57
TRIO-223ENST00000515710 ATP6V1AP38606 617 aa24.88■■□□□ 1.57
TRIO-223ENST00000515710 IL6STP40189 918 aaPredicted RBP24.88■■□□□ 1.57
TRIO-223ENST00000515710 PALLDQ8WX93 1383 aa24.87■■□□□ 1.57
TRIO-223ENST00000515710 TCIRG1Q13488 830 aa24.87■■□□□ 1.57
TRIO-223ENST00000515710 ZNF330Q9Y3S2 320 aaPredicted RBP24.87■■□□□ 1.57
TRIO-223ENST00000515710 AFDNP55196 1824 aaKnown RBP24.87■■□□□ 1.57
TRIO-223ENST00000515710 H7C1W4 665 aa24.86■■□□□ 1.57
TRIO-223ENST00000515710 ISCA1Q9BUE6 129 aa24.86■■□□□ 1.57
TRIO-223ENST00000515710 OSBPL3Q9H4L5 887 aa24.86■■□□□ 1.57
TRIO-223ENST00000515710 ZBTB1Q9Y2K1 713 aa24.86■■□□□ 1.57
TRIO-223ENST00000515710 MAP3K15Q6ZN16 1313 aa24.86■■□□□ 1.57
TRIO-223ENST00000515710 TRIM28Q13263 835 aaKnown RBP24.86■■□□□ 1.57
TRIO-223ENST00000515710 KIF1BPQ96EK5 621 aa24.86■■□□□ 1.57
TRIO-223ENST00000515710 CICQ96RK0 1608 aaPredicted RBP24.86■■□□□ 1.57
TRIO-223ENST00000515710 CASP7P55210 303 aa24.85■■□□□ 1.57
TRIO-223ENST00000515710 TTC22Q5TAA0 569 aa24.84■■□□□ 1.57
TRIO-223ENST00000515710 UBE3BQ7Z3V4 1068 aa24.84■■□□□ 1.57
TRIO-223ENST00000515710 NPM2Q86SE8 214 aaKnown RBP24.84■■□□□ 1.57
TRIO-223ENST00000515710 RHPN1Q8TCX5 695 aa24.84■■□□□ 1.57
TRIO-223ENST00000515710 HSP90AB3PQ58FF7 597 aa24.83■■□□□ 1.57
TRIO-223ENST00000515710 GIGYF2Q6Y7W6 1299 aaKnown RBP24.83■■□□□ 1.57
TRIO-223ENST00000515710 ERC1Q8IUD2 1116 aa24.83■■□□□ 1.57
TRIO-223ENST00000515710 OTUD7AQ8TE49 926 aaPredicted RBP24.83■■□□□ 1.57
TRIO-223ENST00000515710 CCDC87Q9NVE4 849 aa24.83■■□□□ 1.57
TRIO-223ENST00000515710 RABL6Q3YEC7 729 aaPredicted RBP24.82■■□□□ 1.56
TRIO-223ENST00000515710 SALL3Q9BXA9 1300 aa24.82■■□□□ 1.56
TRIO-223ENST00000515710 ERVV-1B6SEH8 477 aa24.82■■□□□ 1.56
TRIO-223ENST00000515710 INTS5Q6P9B9 1019 aaKnown RBP24.82■■□□□ 1.56
TRIO-223ENST00000515710 QTRT2Q9H974 415 aaKnown RBP24.82■■□□□ 1.56
TRIO-223ENST00000515710 SEC24BO95487 1268 aa24.81■■□□□ 1.56
TRIO-223ENST00000515710 PDE1AP54750 535 aa24.81■■□□□ 1.56
TRIO-223ENST00000515710 EPHA10Q5JZY3 1008 aa24.81■■□□□ 1.56
TRIO-223ENST00000515710 UPF2Q9HAU5 1272 aaKnown RBP24.81■■□□□ 1.56
TRIO-223ENST00000515710 ZNF831Q5JPB2 1677 aa24.81■■□□□ 1.56
TRIO-223ENST00000515710 CRKLP46109 303 aaKnown RBP24.8■■□□□ 1.56
TRIO-223ENST00000515710 EIF5P55010 431 aaKnown RBP24.8■■□□□ 1.56
TRIO-223ENST00000515710 ITPK1Q13572 414 aa24.8■■□□□ 1.56
TRIO-223ENST00000515710 ARXQ96QS3 562 aa24.8■■□□□ 1.56
TRIO-223ENST00000515710 GSPT1P15170 499 aaKnown RBP24.8■■□□□ 1.56
TRIO-223ENST00000515710 OS9Q13438 667 aaPredicted RBP24.8■■□□□ 1.56
TRIO-223ENST00000515710 SEPT12Q8IYM1 358 aa24.79■■□□□ 1.56
TRIO-223ENST00000515710 JARID2Q92833 1246 aaPredicted RBP24.79■■□□□ 1.56
TRIO-223ENST00000515710 STAP2Q9UGK3 403 aa24.79■■□□□ 1.56
TRIO-223ENST00000515710 G3BP1Q13283 466 aaKnown RBP eCLIP24.78■■□□□ 1.56
TRIO-223ENST00000515710 DZIP3Q86Y13 1208 aaKnown RBP24.78■■□□□ 1.56
TRIO-223ENST00000515710 MX1P20591 662 aa24.78■■□□□ 1.56
TRIO-223ENST00000515710 RREB1Q92766 1687 aa24.77■■□□□ 1.56
TRIO-223ENST00000515710 AOX1Q06278 1338 aa24.77■■□□□ 1.56
TRIO-223ENST00000515710 IL1RAPL2Q9NP60 686 aa24.77■■□□□ 1.56
TRIO-223ENST00000515710 PA2G4Q9UQ80 394 aaKnown RBP24.77■■□□□ 1.56
TRIO-223ENST00000515710 EIF5BO60841 1220 aaKnown RBP24.76■■□□□ 1.55
TRIO-223ENST00000515710 FOXO4P98177 505 aa24.76■■□□□ 1.55
TRIO-223ENST00000515710 HLFQ16534 295 aa24.76■■□□□ 1.55
TRIO-223ENST00000515710 NHSQ6T4R5 1651 aa24.76■■□□□ 1.55
TRIO-223ENST00000515710 PCCAP05165 728 aaPredicted RBP24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms