RNA–Protein interactions for RNA: ENST00000515144.5

TRIO-222, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene TRIO, Length 7,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-222ENST00000515144 FERMT3Q86UX7 667 aa16.85■□□□□ 0.29
TRIO-222ENST00000515144 CTCFLQ8NI51 663 aaPredicted RBP16.85■□□□□ 0.29
TRIO-222ENST00000515144 CCDC97Q96F63 343 aaPredicted RBP16.85■□□□□ 0.29
TRIO-222ENST00000515144 CABP5Q9NP86 173 aa16.85■□□□□ 0.29
TRIO-222ENST00000515144 HELBQ8NG08 1087 aaPredicted RBP16.85■□□□□ 0.29
TRIO-222ENST00000515144 KIAA0556O60303 1618 aa16.85■□□□□ 0.29
TRIO-222ENST00000515144 ZMYM3Q14202 1370 aa16.84■□□□□ 0.29
TRIO-222ENST00000515144 DRC1Q96MC2 740 aa16.84■□□□□ 0.29
TRIO-222ENST00000515144 UPF3BQ9BZI7 483 aaKnown RBP16.84■□□□□ 0.29
TRIO-222ENST00000515144 ZNHIT6Q9NWK9 470 aaKnown RBP16.84■□□□□ 0.29
TRIO-222ENST00000515144 NPATQ14207 1427 aa16.84■□□□□ 0.29
TRIO-222ENST00000515144 GLRX3O76003 335 aaKnown RBP16.84■□□□□ 0.29
TRIO-222ENST00000515144 CATIPQ7Z7H3 387 aa16.84■□□□□ 0.29
TRIO-222ENST00000515144 C14orf93Q9H972 538 aaKnown RBP16.84■□□□□ 0.29
TRIO-222ENST00000515144 NSFL1CQ9UNZ2 370 aaKnown RBP16.84■□□□□ 0.29
TRIO-222ENST00000515144 TSPY26PQ9H489 355 aa16.84■□□□□ 0.29
TRIO-222ENST00000515144 MBIPQ9NS73 344 aa16.83■□□□□ 0.29
TRIO-222ENST00000515144 BIN2Q9UBW5 565 aaPredicted RBP16.83■□□□□ 0.29
TRIO-222ENST00000515144 ANKRD62A6NC57 917 aa16.83■□□□□ 0.28
TRIO-222ENST00000515144 RDXP35241 583 aaKnown RBP16.83■□□□□ 0.28
TRIO-222ENST00000515144 CKAP2LQ8IYA6 745 aa16.83■□□□□ 0.28
TRIO-222ENST00000515144 TRAK2O60296 914 aa16.82■□□□□ 0.28
TRIO-222ENST00000515144 CT47B1P0C2W7 299 aaPredicted RBP16.82■□□□□ 0.28
TRIO-222ENST00000515144 MSL1Q68DK7 614 aa16.82■□□□□ 0.28
TRIO-222ENST00000515144 KRT85P78386 507 aa16.82■□□□□ 0.28
TRIO-222ENST00000515144 K7ELQ4 463 aaPredicted RBP16.82■□□□□ 0.28
TRIO-222ENST00000515144 PPFIBP1Q86W92 1011 aa16.82■□□□□ 0.28
TRIO-222ENST00000515144 KCNA6P17658 529 aa16.82■□□□□ 0.28
TRIO-222ENST00000515144 C19orf44Q9H6X5 657 aa16.82■□□□□ 0.28
TRIO-222ENST00000515144 SSRP1Q08945 709 aaKnown RBP16.82■□□□□ 0.28
TRIO-222ENST00000515144 USP21Q9UK80 565 aa16.82■□□□□ 0.28
TRIO-222ENST00000515144 GOLGA8BA8MQT2 603 aa16.82■□□□□ 0.28
TRIO-222ENST00000515144 KRT32Q14532 448 aa16.81■□□□□ 0.28
TRIO-222ENST00000515144 TMEM67Q5HYA8 995 aa16.81■□□□□ 0.28
TRIO-222ENST00000515144 HDAC9Q9UKV0 1011 aa16.81■□□□□ 0.28
TRIO-222ENST00000515144 UHRF1BP1Q6BDS2 1440 aa16.81■□□□□ 0.28
TRIO-222ENST00000515144 NKTRP30414 1462 aaKnown RBP16.81■□□□□ 0.28
TRIO-222ENST00000515144 TSPY3P0CV98 308 aa16.81■□□□□ 0.28
TRIO-222ENST00000515144 TSPY8P0CW00 308 aa16.81■□□□□ 0.28
TRIO-222ENST00000515144 KAT14Q9H8E8 782 aa16.81■□□□□ 0.28
TRIO-222ENST00000515144 LMOD1P29536 600 aaPredicted RBP16.8■□□□□ 0.28
TRIO-222ENST00000515144 TRAPPC8Q9Y2L5 1435 aa16.8■□□□□ 0.28
TRIO-222ENST00000515144 CCDC181Q5TID7 509 aa16.8■□□□□ 0.28
TRIO-222ENST00000515144 MICU3Q86XE3 530 aa16.8■□□□□ 0.28
TRIO-222ENST00000515144 WASF1Q92558 559 aa16.8■□□□□ 0.28
TRIO-222ENST00000515144 MMRN2Q9H8L6 949 aa16.8■□□□□ 0.28
TRIO-222ENST00000515144 CYP7A1P22680 504 aa16.8■□□□□ 0.28
TRIO-222ENST00000515144 UTP14AQ9BVJ6 771 aaKnown RBP16.8■□□□□ 0.28
TRIO-222ENST00000515144 RARSP54136 660 aaKnown RBP16.8■□□□□ 0.28
TRIO-222ENST00000515144 ADAMTS12P58397 1594 aa16.8■□□□□ 0.28
TRIO-222ENST00000515144 JDP2Q8WYK2 163 aa16.8■□□□□ 0.28
TRIO-222ENST00000515144 ZC3H12CQ9C0D7 883 aaKnown RBP16.8■□□□□ 0.28
TRIO-222ENST00000515144 TRIM21P19474 475 aaKnown RBP16.8■□□□□ 0.28
TRIO-222ENST00000515144 PRKG1Q13976 671 aa16.8■□□□□ 0.28
TRIO-222ENST00000515144 APBA3O96018 575 aa16.79■□□□□ 0.28
TRIO-222ENST00000515144 ORAI2Q96SN7 254 aa16.79■□□□□ 0.28
TRIO-222ENST00000515144 TRAPPC3LQ5T215 181 aa16.79■□□□□ 0.28
TRIO-222ENST00000515144 RPAP2Q8IXW5 612 aaPredicted RBP16.79■□□□□ 0.28
TRIO-222ENST00000515144 PDE4BQ07343 736 aa16.79■□□□□ 0.28
TRIO-222ENST00000515144 ISM2Q6H9L7 571 aa16.79■□□□□ 0.28
TRIO-222ENST00000515144 PLCH2O75038 1416 aa16.78■□□□□ 0.28
TRIO-222ENST00000515144 MFSD6Q6ZSS7 791 aa16.78■□□□□ 0.28
TRIO-222ENST00000515144 SPTY2D1Q68D10 685 aaPredicted RBP16.78■□□□□ 0.28
TRIO-222ENST00000515144 GOLGA8AA7E2F4 631 aa16.78■□□□□ 0.28
TRIO-222ENST00000515144 CEP131Q9UPN4 1083 aa16.78■□□□□ 0.28
TRIO-222ENST00000515144 NYXQ9GZU5 481 aa16.78■□□□□ 0.28
TRIO-222ENST00000515144 CFAP45Q9UL16 551 aa16.78■□□□□ 0.28
TRIO-222ENST00000515144 WDR33Q9C0J8 1336 aaKnown RBP16.78■□□□□ 0.28
TRIO-222ENST00000515144 C8orf76Q96K31 380 aa16.78■□□□□ 0.28
TRIO-222ENST00000515144 GCP02774 474 aa16.77■□□□□ 0.28
TRIO-222ENST00000515144 ZNF771Q7L3S4 317 aaPredicted RBP16.77■□□□□ 0.28
TRIO-222ENST00000515144 TNNT1P13805 278 aa16.77■□□□□ 0.27
TRIO-222ENST00000515144 PSMD1Q99460 953 aa16.77■□□□□ 0.27
TRIO-222ENST00000515144 CCNL1Q9UK58 526 aaPredicted RBP16.77■□□□□ 0.27
TRIO-222ENST00000515144 EIF5P55010 431 aaKnown RBP16.77■□□□□ 0.27
TRIO-222ENST00000515144 SMARCC1Q92922 1105 aaPredicted RBP16.77■□□□□ 0.27
TRIO-222ENST00000515144 LRRC2Q9BYS8 371 aa16.77■□□□□ 0.27
TRIO-222ENST00000515144 CENPHQ9H3R5 247 aa16.77■□□□□ 0.27
TRIO-222ENST00000515144 LETM1O95202 739 aaPredicted RBP16.77■□□□□ 0.27
TRIO-222ENST00000515144 TRIM27P14373 513 aa16.77■□□□□ 0.27
TRIO-222ENST00000515144 DHX37Q8IY37 1157 aaKnown RBP16.77■□□□□ 0.27
TRIO-222ENST00000515144 CRNKL1Q9BZJ0 848 aaKnown RBP16.76■□□□□ 0.27
TRIO-222ENST00000515144 EAPPQ56P03 285 aaPredicted RBP16.76■□□□□ 0.27
TRIO-222ENST00000515144 DACH1Q9UI36 760 aa16.76■□□□□ 0.27
TRIO-222ENST00000515144 EIF4A2Q14240 407 aaKnown RBP16.76■□□□□ 0.27
TRIO-222ENST00000515144 PTPRCP08575 1304 aa16.76■□□□□ 0.27
TRIO-222ENST00000515144 SAP30BPQ9UHR5 308 aaKnown RBP16.76■□□□□ 0.27
TRIO-222ENST00000515144 TTF1Q15361 905 aaPredicted RBP16.76■□□□□ 0.27
TRIO-222ENST00000515144 MIGA1Q8NAN2 632 aa16.76■□□□□ 0.27
TRIO-222ENST00000515144 PANK2Q9BZ23 570 aa16.75■□□□□ 0.27
TRIO-222ENST00000515144 SLC4A4Q9Y6R1 1079 aa16.75■□□□□ 0.27
TRIO-222ENST00000515144 ZNF804AQ7Z570 1209 aa16.75■□□□□ 0.27
TRIO-222ENST00000515144 PIK3R4Q99570 1358 aa16.75■□□□□ 0.27
TRIO-222ENST00000515144 SEPT7Q16181 437 aaKnown RBP16.75■□□□□ 0.27
TRIO-222ENST00000515144 EHMT1Q9H9B1 1298 aa16.75■□□□□ 0.27
TRIO-222ENST00000515144 TPTE2Q6XPS3 522 aa16.75■□□□□ 0.27
TRIO-222ENST00000515144 SETQ01105 290 aaPredicted RBP16.75■□□□□ 0.27
TRIO-222ENST00000515144 MYO6Q9UM54 1294 aa16.75■□□□□ 0.27
TRIO-222ENST00000515144 STK32BQ9NY57 414 aa16.75■□□□□ 0.27
TRIO-222ENST00000515144 PA2G4Q9UQ80 394 aaKnown RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms