RNA–Protein interactions for RNA: ENST00000514642.1

CCDC30-214, Transcript of coiled-coil domain containing 30, humanhuman

TSL 1 (best)

Gene CCDC30, Length 6,827 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-214ENST00000514642 DDX49Q9Y6V7 483 aaKnown RBP8.78□□□□□ -1
CCDC30-214ENST00000514642 TMEM266Q2M3C6 531 aa8.78□□□□□ -1
CCDC30-214ENST00000514642 LARGE2Q8N3Y3 721 aa8.78□□□□□ -1
CCDC30-214ENST00000514642 KIF5BP33176 963 aa8.78□□□□□ -1
CCDC30-214ENST00000514642 PLS1Q14651 629 aa8.78□□□□□ -1
CCDC30-214ENST00000514642 PARP10Q53GL7 1025 aa8.78□□□□□ -1
CCDC30-214ENST00000514642 MAGI2Q86UL8 1455 aa8.78□□□□□ -1
CCDC30-214ENST00000514642 MAST3O60307 1309 aa8.78□□□□□ -1
CCDC30-214ENST00000514642 GLRX3O76003 335 aaKnown RBP8.78□□□□□ -1
CCDC30-214ENST00000514642 RAB34Q9BZG1 259 aa8.78□□□□□ -1
CCDC30-214ENST00000514642 BCS1LQ9Y276 419 aa8.78□□□□□ -1
CCDC30-214ENST00000514642 TMEM2Q9UHN6 1383 aa8.78□□□□□ -1
CCDC30-214ENST00000514642 PPP1R12BO60237 982 aaPredicted RBP8.77□□□□□ -1
CCDC30-214ENST00000514642 BLOC1S2Q6QNY1 142 aa8.77□□□□□ -1
CCDC30-214ENST00000514642 SH2D4AQ9H788 454 aa8.77□□□□□ -1.01
CCDC30-214ENST00000514642 MYO6Q9UM54 1294 aa8.77□□□□□ -1.01
CCDC30-214ENST00000514642 PICALMQ13492 652 aa8.77□□□□□ -1.01
CCDC30-214ENST00000514642 NUTM1Q86Y26 1132 aa8.77□□□□□ -1.01
CCDC30-214ENST00000514642 STK3Q13188 491 aa8.77□□□□□ -1.01
CCDC30-214ENST00000514642 KRT27Q7Z3Y8 459 aa8.77□□□□□ -1.01
CCDC30-214ENST00000514642 SMARCE1Q969G3 411 aa8.77□□□□□ -1.01
CCDC30-214ENST00000514642 SDF4Q9BRK5 362 aa8.77□□□□□ -1.01
CCDC30-214ENST00000514642 DISP3Q9P2K9 1392 aa8.77□□□□□ -1.01
CCDC30-214ENST00000514642 ZNF213O14771 459 aa8.77□□□□□ -1.01
CCDC30-214ENST00000514642 HOXC9P31274 260 aa8.77□□□□□ -1.01
CCDC30-214ENST00000514642 CWC27Q6UX04 472 aaKnown RBP8.77□□□□□ -1.01
CCDC30-214ENST00000514642 TANGO6Q9C0B7 1094 aa8.77□□□□□ -1.01
CCDC30-214ENST00000514642 IL1RAPL2Q9NP60 686 aa8.77□□□□□ -1.01
CCDC30-214ENST00000514642 PIK3C2GO75747 1445 aa8.77□□□□□ -1.01
CCDC30-214ENST00000514642 H7C1D1 291 aa8.77□□□□□ -1.01
CCDC30-214ENST00000514642 MAP3K5Q99683 1374 aa8.76□□□□□ -1.01
CCDC30-214ENST00000514642 ZSCAN31Q96LW9 406 aaPredicted RBP8.76□□□□□ -1.01
CCDC30-214ENST00000514642 THUMPD2Q9BTF0 503 aaKnown RBP8.76□□□□□ -1.01
CCDC30-214ENST00000514642 C22orf23Q9BZE7 217 aa8.76□□□□□ -1.01
CCDC30-214ENST00000514642 PDRG1Q9NUG6 133 aa8.76□□□□□ -1.01
CCDC30-214ENST00000514642 MAP3K9P80192 1104 aa8.76□□□□□ -1.01
CCDC30-214ENST00000514642 PHAXQ9H814 394 aaKnown RBP8.76□□□□□ -1.01
CCDC30-214ENST00000514642 NSFL1CQ9UNZ2 370 aaKnown RBP8.76□□□□□ -1.01
CCDC30-214ENST00000514642 TSPY2A6NKD2 308 aa8.76□□□□□ -1.01
CCDC30-214ENST00000514642 FLIIQ13045 1269 aa8.76□□□□□ -1.01
CCDC30-214ENST00000514642 XAGE3Q8WTP9 111 aa8.76□□□□□ -1.01
CCDC30-214ENST00000514642 TSPY3P0CV98 308 aa8.76□□□□□ -1.01
CCDC30-214ENST00000514642 TSPY8P0CW00 308 aa8.76□□□□□ -1.01
CCDC30-214ENST00000514642 UBE3BQ7Z3V4 1068 aa8.76□□□□□ -1.01
CCDC30-214ENST00000514642 TXLNBQ8N3L3 684 aa8.76□□□□□ -1.01
CCDC30-214ENST00000514642 CCDC39Q9UFE4 941 aa8.76□□□□□ -1.01
CCDC30-214ENST00000514642 SLC12A7Q9Y666 1083 aa8.76□□□□□ -1.01
CCDC30-214ENST00000514642 UGGT1Q9NYU2 1555 aa8.76□□□□□ -1.01
CCDC30-214ENST00000514642 DPP8Q6V1X1 898 aaPredicted RBP8.76□□□□□ -1.01
CCDC30-214ENST00000514642 CEP57L1Q8IYX8 460 aa8.76□□□□□ -1.01
CCDC30-214ENST00000514642 GGA1Q9UJY5 639 aa8.76□□□□□ -1.01
CCDC30-214ENST00000514642 MAPKBP1O60336 1514 aa8.75□□□□□ -1.01
CCDC30-214ENST00000514642 KDM5DQ9BY66 1539 aa8.75□□□□□ -1.01
CCDC30-214ENST00000514642 KINO60870 393 aaKnown RBP8.75□□□□□ -1.01
CCDC30-214ENST00000514642 SLC39A6Q13433 755 aa8.75□□□□□ -1.01
CCDC30-214ENST00000514642 IRS4O14654 1257 aaPredicted RBP8.75□□□□□ -1.01
CCDC30-214ENST00000514642 HMGB1P09429 215 aaKnown RBP8.75□□□□□ -1.01
CCDC30-214ENST00000514642 ZFYVE9O95405 1425 aa8.75□□□□□ -1.01
CCDC30-214ENST00000514642 NFATC2IPQ8NCF5 419 aa8.75□□□□□ -1.01
CCDC30-214ENST00000514642 ORAI2Q96SN7 254 aa8.75□□□□□ -1.01
CCDC30-214ENST00000514642 PUS7Q96PZ0 661 aaKnown RBP8.75□□□□□ -1.01
CCDC30-214ENST00000514642 UFL1O94874 794 aa8.75□□□□□ -1.01
CCDC30-214ENST00000514642 LETM1O95202 739 aaPredicted RBP8.75□□□□□ -1.01
CCDC30-214ENST00000514642 TNNT3P45378 269 aaPredicted RBP8.75□□□□□ -1.01
CCDC30-214ENST00000514642 BRDTQ58F21 947 aaPredicted RBP8.75□□□□□ -1.01
CCDC30-214ENST00000514642 CCAR2Q8N163 923 aaKnown RBP8.75□□□□□ -1.01
CCDC30-214ENST00000514642 BOLA2Q9H3K6 86 aa8.75□□□□□ -1.01
CCDC30-214ENST00000514642 RNMTO43148 476 aaKnown RBP8.74□□□□□ -1.01
CCDC30-214ENST00000514642 SMC2O95347 1197 aa8.74□□□□□ -1.01
CCDC30-214ENST00000514642 RABEP1Q15276 862 aa8.74□□□□□ -1.01
CCDC30-214ENST00000514642 LUC7LQ9NQ29 371 aaKnown RBP8.74□□□□□ -1.01
CCDC30-214ENST00000514642 SSRP1Q08945 709 aaKnown RBP8.74□□□□□ -1.01
CCDC30-214ENST00000514642 NCBP1Q09161 790 aaKnown RBP8.74□□□□□ -1.01
CCDC30-214ENST00000514642 NAA16Q6N069 864 aaPredicted RBP8.74□□□□□ -1.01
CCDC30-214ENST00000514642 KDM5CP41229 1560 aa8.74□□□□□ -1.01
CCDC30-214ENST00000514642 TMEM94Q12767 1356 aa8.74□□□□□ -1.01
CCDC30-214ENST00000514642 CYP7A1P22680 504 aa8.74□□□□□ -1.01
CCDC30-214ENST00000514642 FBXO3Q9UK99 471 aa8.74□□□□□ -1.01
CCDC30-214ENST00000514642 DISP1Q96F81 1524 aa8.74□□□□□ -1.01
CCDC30-214ENST00000514642 SAMD9Q5K651 1589 aa8.74□□□□□ -1.01
CCDC30-214ENST00000514642 RALGAPBQ86X10 1494 aa8.74□□□□□ -1.01
CCDC30-214ENST00000514642 OTUD7BQ6GQQ9 843 aa8.74□□□□□ -1.01
CCDC30-214ENST00000514642 CHD1LQ86WJ1 897 aa8.74□□□□□ -1.01
CCDC30-214ENST00000514642 CERKQ8TCT0 537 aa8.74□□□□□ -1.01
CCDC30-214ENST00000514642 PDZRN3Q9UPQ7 1066 aa8.74□□□□□ -1.01
CCDC30-214ENST00000514642 PDE4AP27815 886 aa8.74□□□□□ -1.01
CCDC30-214ENST00000514642 NEK4P51957 841 aa8.74□□□□□ -1.01
CCDC30-214ENST00000514642 COPS6Q7L5N1 327 aa8.74□□□□□ -1.01
CCDC30-214ENST00000514642 TSG101Q99816 390 aa8.74□□□□□ -1.01
CCDC30-214ENST00000514642 PRIM1P49642 420 aaKnown RBP8.73□□□□□ -1.01
CCDC30-214ENST00000514642 DCPSQ96C86 337 aaKnown RBP8.73□□□□□ -1.01
CCDC30-214ENST00000514642 JAKMIP1Q96N16 626 aaKnown RBP8.73□□□□□ -1.01
CCDC30-214ENST00000514642 CHPF2Q9P2E5 772 aa8.73□□□□□ -1.01
CCDC30-214ENST00000514642 SAMM50Q9Y512 469 aa8.73□□□□□ -1.01
CCDC30-214ENST00000514642 LDHBP07195 334 aaKnown RBP8.73□□□□□ -1.01
CCDC30-214ENST00000514642 MFSD6Q6ZSS7 791 aa8.73□□□□□ -1.01
CCDC30-214ENST00000514642 PDILTQ8N807 584 aa8.73□□□□□ -1.01
CCDC30-214ENST00000514642 CCDC8Q9H0W5 538 aaPredicted RBP8.73□□□□□ -1.01
CCDC30-214ENST00000514642 IFIT3O14879 490 aaKnown RBP8.73□□□□□ -1.01
CCDC30-214ENST00000514642 MX1P20591 662 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms