RNA–Protein interactions for RNA: ENST00000512648.5

SPOCK3-221, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 1 (best) BASIC

Gene SPOCK3, Length 1,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-221ENST00000512648 SMARCC1Q92922 1105 aaPredicted RBP30.25■■■□□ 2.43
SPOCK3-221ENST00000512648 GJD4Q96KN9 370 aaPredicted RBP30.25■■■□□ 2.43
SPOCK3-221ENST00000512648 ZBTB47Q9UFB7 747 aaPredicted RBP30.25■■■□□ 2.43
SPOCK3-221ENST00000512648 PIP4K2AP48426 406 aaPredicted RBP30.25■■■□□ 2.43
SPOCK3-221ENST00000512648 MYD88Q99836 296 aa30.25■■■□□ 2.43
SPOCK3-221ENST00000512648 ATRNO75882 1429 aa30.24■■■□□ 2.43
SPOCK3-221ENST00000512648 PPP1R42Q7Z4L9 355 aa30.24■■■□□ 2.43
SPOCK3-221ENST00000512648 THSD7AQ9UPZ6 1657 aa30.23■■■□□ 2.43
SPOCK3-221ENST00000512648 TRPC5Q9UL62 973 aaPredicted RBP30.23■■■□□ 2.43
SPOCK3-221ENST00000512648 AFF2P51816 1311 aa30.23■■■□□ 2.43
SPOCK3-221ENST00000512648 RAB11FIP3O75154 756 aa30.22■■■□□ 2.43
SPOCK3-221ENST00000512648 TTLL7Q6ZT98 887 aa30.21■■■□□ 2.43
SPOCK3-221ENST00000512648 CICQ96RK0 1608 aaPredicted RBP30.19■■■□□ 2.42
SPOCK3-221ENST00000512648 TRIM28Q13263 835 aaKnown RBP30.19■■■□□ 2.42
SPOCK3-221ENST00000512648 BMP2KLQ5H9B9 411 aa30.19■■■□□ 2.42
SPOCK3-221ENST00000512648 NOP58Q9Y2X3 529 aaKnown RBP30.19■■■□□ 2.42
SPOCK3-221ENST00000512648 HSP90AB4PQ58FF6 505 aa30.19■■■□□ 2.42
SPOCK3-221ENST00000512648 ACSBG1Q96GR2 724 aa30.19■■■□□ 2.42
SPOCK3-221ENST00000512648 SRGAP3O43295 1099 aa30.18■■■□□ 2.42
SPOCK3-221ENST00000512648 PLEKHM2Q8IWE5 1019 aa30.18■■■□□ 2.42
SPOCK3-221ENST00000512648 KAZALD1Q96I82 304 aa30.18■■■□□ 2.42
SPOCK3-221ENST00000512648 IL6STP40189 918 aaPredicted RBP30.17■■■□□ 2.42
SPOCK3-221ENST00000512648 CCDC191Q8NCU4 936 aa30.17■■■□□ 2.42
SPOCK3-221ENST00000512648 LRRCC1Q9C099 1032 aa30.17■■■□□ 2.42
SPOCK3-221ENST00000512648 ARFGEF2Q9Y6D5 1785 aa30.16■■■□□ 2.42
SPOCK3-221ENST00000512648 SUCLG2Q96I99 432 aa30.16■■■□□ 2.42
SPOCK3-221ENST00000512648 LOC102724428A0A0B4J2F2 783 aa30.15■■■□□ 2.42
SPOCK3-221ENST00000512648 H7C1W4 665 aa30.15■■■□□ 2.42
SPOCK3-221ENST00000512648 SIK1P57059 783 aa30.15■■■□□ 2.42
SPOCK3-221ENST00000512648 ISCA1Q9BUE6 129 aa30.15■■■□□ 2.42
SPOCK3-221ENST00000512648 OSBPL3Q9H4L5 887 aa30.15■■■□□ 2.42
SPOCK3-221ENST00000512648 CASP7P55210 303 aa30.14■■■□□ 2.42
SPOCK3-221ENST00000512648 EXOC6BQ9Y2D4 811 aa30.14■■■□□ 2.42
SPOCK3-221ENST00000512648 TJP1Q07157 1748 aa30.14■■■□□ 2.42
SPOCK3-221ENST00000512648 TCIRG1Q13488 830 aa30.13■■■□□ 2.41
SPOCK3-221ENST00000512648 KIF6Q6ZMV9 814 aa30.13■■■□□ 2.41
SPOCK3-221ENST00000512648 NUP188Q5SRE5 1749 aa30.13■■■□□ 2.41
SPOCK3-221ENST00000512648 PALLDQ8WX93 1383 aa30.13■■■□□ 2.41
SPOCK3-221ENST00000512648 ZNF831Q5JPB2 1677 aa30.13■■■□□ 2.41
SPOCK3-221ENST00000512648 CWC25Q9NXE8 425 aaPredicted RBP30.12■■■□□ 2.41
SPOCK3-221ENST00000512648 MAP3K15Q6ZN16 1313 aa30.12■■■□□ 2.41
SPOCK3-221ENST00000512648 ERVV-1B6SEH8 477 aa30.12■■■□□ 2.41
SPOCK3-221ENST00000512648 RABL6Q3YEC7 729 aaPredicted RBP30.12■■■□□ 2.41
SPOCK3-221ENST00000512648 A0A087WZG4 1122 aa30.11■■■□□ 2.41
SPOCK3-221ENST00000512648 KCNQ2O43526 872 aa30.11■■■□□ 2.41
SPOCK3-221ENST00000512648 SURF6O75683 361 aaKnown RBP30.11■■■□□ 2.41
SPOCK3-221ENST00000512648 BICC1Q9H694 974 aaKnown RBP30.11■■■□□ 2.41
SPOCK3-221ENST00000512648 ATP5J2-PTCD1G3V325 749 aa30.1■■■□□ 2.41
SPOCK3-221ENST00000512648 ATP6V1AP38606 617 aa30.1■■■□□ 2.41
SPOCK3-221ENST00000512648 GIGYF2Q6Y7W6 1299 aaKnown RBP30.1■■■□□ 2.41
SPOCK3-221ENST00000512648 ZBTB3Q9H5J0 574 aa30.1■■■□□ 2.41
SPOCK3-221ENST00000512648 HSP90AB3PQ58FF7 597 aa30.09■■■□□ 2.41
SPOCK3-221ENST00000512648 C16orf71Q8IYS4 520 aaPredicted RBP30.09■■■□□ 2.41
SPOCK3-221ENST00000512648 KIF1BPQ96EK5 621 aa30.09■■■□□ 2.41
SPOCK3-221ENST00000512648 ZBTB1Q9Y2K1 713 aa30.09■■■□□ 2.41
SPOCK3-221ENST00000512648 SALL3Q9BXA9 1300 aa30.09■■■□□ 2.41
SPOCK3-221ENST00000512648 SMARCA5O60264 1052 aaPredicted RBP30.08■■■□□ 2.41
SPOCK3-221ENST00000512648 EIF5P55010 431 aaKnown RBP30.08■■■□□ 2.41
SPOCK3-221ENST00000512648 INTS5Q6P9B9 1019 aaKnown RBP30.08■■■□□ 2.41
SPOCK3-221ENST00000512648 QTRT2Q9H974 415 aaKnown RBP30.08■■■□□ 2.41
SPOCK3-221ENST00000512648 CCDC87Q9NVE4 849 aa30.08■■■□□ 2.41
SPOCK3-221ENST00000512648 A0A0G2JS52 829 aa30.06■■■□□ 2.4
SPOCK3-221ENST00000512648 MYT1Q01538 1121 aa30.06■■■□□ 2.4
SPOCK3-221ENST00000512648 ERC1Q8IUD2 1116 aa30.06■■■□□ 2.4
SPOCK3-221ENST00000512648 RHPN1Q8TCX5 695 aa30.06■■■□□ 2.4
SPOCK3-221ENST00000512648 STAP2Q9UGK3 403 aa30.06■■■□□ 2.4
SPOCK3-221ENST00000512648 RREB1Q92766 1687 aa30.06■■■□□ 2.4
SPOCK3-221ENST00000512648 TTC22Q5TAA0 569 aa30.06■■■□□ 2.4
SPOCK3-221ENST00000512648 UBE3BQ7Z3V4 1068 aa30.06■■■□□ 2.4
SPOCK3-221ENST00000512648 ANP32AP39687 249 aaKnown RBP30.05■■■□□ 2.4
SPOCK3-221ENST00000512648 ITPK1Q13572 414 aa30.05■■■□□ 2.4
SPOCK3-221ENST00000512648 APBB1O00213 710 aa30.04■■■□□ 2.4
SPOCK3-221ENST00000512648 SEPT12Q8IYM1 358 aa30.04■■■□□ 2.4
SPOCK3-221ENST00000512648 AOX1Q06278 1338 aa30.04■■■□□ 2.4
SPOCK3-221ENST00000512648 CRKLP46109 303 aaKnown RBP30.03■■■□□ 2.4
SPOCK3-221ENST00000512648 PDE1AP54750 535 aa30.03■■■□□ 2.4
SPOCK3-221ENST00000512648 EPHA10Q5JZY3 1008 aa30.03■■■□□ 2.4
SPOCK3-221ENST00000512648 NPM2Q86SE8 214 aaKnown RBP30.03■■■□□ 2.4
SPOCK3-221ENST00000512648 EIF5BO60841 1220 aaKnown RBP30.02■■■□□ 2.4
SPOCK3-221ENST00000512648 OTUD7AQ8TE49 926 aaPredicted RBP30.02■■■□□ 2.4
SPOCK3-221ENST00000512648 COPRSQ9NQ92 184 aa30.02■■■□□ 2.4
SPOCK3-221ENST00000512648 RGL2O15211 777 aa30■■■□□ 2.39
SPOCK3-221ENST00000512648 PCCAP05165 728 aaPredicted RBP30■■■□□ 2.39
SPOCK3-221ENST00000512648 GSPT1P15170 499 aaKnown RBP30■■■□□ 2.39
SPOCK3-221ENST00000512648 FOXO4P98177 505 aa30■■■□□ 2.39
SPOCK3-221ENST00000512648 AFDNP55196 1824 aaKnown RBP30■■■□□ 2.39
SPOCK3-221ENST00000512648 KAT6BQ8WYB5 2073 aa30■■■□□ 2.39
SPOCK3-221ENST00000512648 NHSQ6T4R5 1651 aa30■■■□□ 2.39
SPOCK3-221ENST00000512648 RFX5P48382 616 aaPredicted RBP29.99■■■□□ 2.39
SPOCK3-221ENST00000512648 DZIP3Q86Y13 1208 aaKnown RBP29.99■■■□□ 2.39
SPOCK3-221ENST00000512648 PLA2G12BQ9BX93 195 aa29.99■■■□□ 2.39
SPOCK3-221ENST00000512648 SEC24BO95487 1268 aa29.99■■■□□ 2.39
SPOCK3-221ENST00000512648 ZNF330Q9Y3S2 320 aaPredicted RBP29.99■■■□□ 2.39
SPOCK3-221ENST00000512648 MX1P20591 662 aa29.98■■■□□ 2.39
SPOCK3-221ENST00000512648 RC3H1Q5TC82 1133 aaKnown RBP29.98■■■□□ 2.39
SPOCK3-221ENST00000512648 ZBTB38Q8NAP3 1195 aaPredicted RBP29.98■■■□□ 2.39
SPOCK3-221ENST00000512648 CNTNAP4Q9C0A0 1308 aa29.97■■■□□ 2.39
SPOCK3-221ENST00000512648 G3BP1Q13283 466 aaKnown RBP eCLIP29.97■■■□□ 2.39
SPOCK3-221ENST00000512648 HLFQ16534 295 aa29.97■■■□□ 2.39
SPOCK3-221ENST00000512648 UPF2Q9HAU5 1272 aaKnown RBP29.97■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms