RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-215ENST00000512431 TEFQ10587 303 aa17.03■□□□□ 0.32
DDX41-215ENST00000512431 ABHD8Q96I13 439 aa17.03■□□□□ 0.32
DDX41-215ENST00000512431 EPHX2P34913 555 aa17.02■□□□□ 0.32
DDX41-215ENST00000512431 FAM161AQ3B820 660 aa17.02■□□□□ 0.32
DDX41-215ENST00000512431 ANKRD31Q8N7Z5 1873 aa17.01■□□□□ 0.31
DDX41-215ENST00000512431 HSPA8P11142 646 aaKnown RBP17.01■□□□□ 0.31
DDX41-215ENST00000512431 EIF4G2P78344 907 aaKnown RBP eCLIP17.01■□□□□ 0.31
DDX41-215ENST00000512431 ZNF790Q6PG37 636 aa17.01■□□□□ 0.31
DDX41-215ENST00000512431 CNTROBQ8N137 903 aa17.01■□□□□ 0.31
DDX41-215ENST00000512431 ZNF496Q96IT1 587 aaPredicted RBP17.01■□□□□ 0.31
DDX41-215ENST00000512431 ABT1Q9ULW3 272 aaKnown RBP17.01■□□□□ 0.31
DDX41-215ENST00000512431 HEG1Q9ULI3 1381 aa17.01■□□□□ 0.31
DDX41-215ENST00000512431 SCN4AP35499 1836 aa17■□□□□ 0.31
DDX41-215ENST00000512431 RASSF10A6NK89 507 aa17■□□□□ 0.31
DDX41-215ENST00000512431 FKBP4Q02790 459 aaKnown RBP eCLIP17■□□□□ 0.31
DDX41-215ENST00000512431 BEGAINQ9BUH8 593 aa17■□□□□ 0.31
DDX41-215ENST00000512431 WDR33Q9C0J8 1336 aaKnown RBP16.99■□□□□ 0.31
DDX41-215ENST00000512431 COL11A2P13942 1736 aaPredicted RBP16.99■□□□□ 0.31
DDX41-215ENST00000512431 CAMTA2O94983 1202 aa16.99■□□□□ 0.31
DDX41-215ENST00000512431 NPR1P16066 1061 aa16.99■□□□□ 0.31
DDX41-215ENST00000512431 NBPF5PQ86XG9 351 aaPredicted RBP16.99■□□□□ 0.31
DDX41-215ENST00000512431 DZIP3Q86Y13 1208 aaKnown RBP16.99■□□□□ 0.31
DDX41-215ENST00000512431 RTKN2Q8IZC4 609 aa16.99■□□□□ 0.31
DDX41-215ENST00000512431 FMNL2Q96PY5 1086 aa16.99■□□□□ 0.31
DDX41-215ENST00000512431 DIAPH1O60610 1272 aaKnown RBP16.98■□□□□ 0.31
DDX41-215ENST00000512431 A1BGP04217 495 aa16.98■□□□□ 0.31
DDX41-215ENST00000512431 MLLT1Q03111 559 aaPredicted RBP16.98■□□□□ 0.31
DDX41-215ENST00000512431 MAP1SQ66K74 1059 aaPredicted RBP16.98■□□□□ 0.31
DDX41-215ENST00000512431 C7orf43Q8WVR3 580 aa16.98■□□□□ 0.31
DDX41-215ENST00000512431 ZNF277Q9NRM2 450 aaPredicted RBP16.98■□□□□ 0.31
DDX41-215ENST00000512431 ZNF652Q9Y2D9 606 aa16.98■□□□□ 0.31
DDX41-215ENST00000512431 SLX4Q8IY92 1834 aa16.98■□□□□ 0.31
DDX41-215ENST00000512431 SCN7AQ01118 1682 aa16.97■□□□□ 0.31
DDX41-215ENST00000512431 ZNF541Q9H0D2 1346 aa16.97■□□□□ 0.31
DDX41-215ENST00000512431 CCDC85CA6NKD9 419 aa16.97■□□□□ 0.31
DDX41-215ENST00000512431 GNAT3A8MTJ3 354 aa16.97■□□□□ 0.31
DDX41-215ENST00000512431 UBR2Q8IWV8 1755 aa16.97■□□□□ 0.31
DDX41-215ENST00000512431 RNF123Q5XPI4 1314 aa16.96■□□□□ 0.31
DDX41-215ENST00000512431 HSPA5P11021 654 aaKnown RBP16.96■□□□□ 0.31
DDX41-215ENST00000512431 ECE1P42892 770 aa16.96■□□□□ 0.31
DDX41-215ENST00000512431 CLEC4GQ6UXB4 293 aa16.96■□□□□ 0.31
DDX41-215ENST00000512431 TPTE2Q6XPS3 522 aa16.96■□□□□ 0.31
DDX41-215ENST00000512431 PAXIP1Q6ZW49 1069 aaPredicted RBP16.96■□□□□ 0.31
DDX41-215ENST00000512431 GAS2L2Q8NHY3 880 aa16.96■□□□□ 0.31
DDX41-215ENST00000512431 ALDH1B1P30837 517 aa16.95■□□□□ 0.3
DDX41-215ENST00000512431 IARSP41252 1262 aaKnown RBP16.95■□□□□ 0.3
DDX41-215ENST00000512431 GPC2Q8N158 579 aa16.95■□□□□ 0.3
DDX41-215ENST00000512431 JDP2Q8WYK2 163 aa16.95■□□□□ 0.3
DDX41-215ENST00000512431 VIRMAQ69YN4 1812 aaKnown RBP16.95■□□□□ 0.3
DDX41-215ENST00000512431 FZD9O00144 591 aa16.94■□□□□ 0.3
DDX41-215ENST00000512431 LMOD1P29536 600 aaPredicted RBP16.94■□□□□ 0.3
DDX41-215ENST00000512431 IL17REQ8NFR9 667 aa16.94■□□□□ 0.3
DDX41-215ENST00000512431 DDX21Q9NR30 783 aaKnown RBP eCLIP16.94■□□□□ 0.3
DDX41-215ENST00000512431 CACNA1SQ13698 1873 aa16.93■□□□□ 0.3
DDX41-215ENST00000512431 GTF2E1P29083 439 aaPredicted RBP16.93■□□□□ 0.3
DDX41-215ENST00000512431 EIF6P56537 245 aaKnown RBP16.93■□□□□ 0.3
DDX41-215ENST00000512431 SYNE4Q8N205 404 aa16.93■□□□□ 0.3
DDX41-215ENST00000512431 PCDH10Q9P2E7 1040 aa16.93■□□□□ 0.3
DDX41-215ENST00000512431 ARFGEF2Q9Y6D5 1785 aa16.92■□□□□ 0.3
DDX41-215ENST00000512431 BTBD11A6QL63 1104 aa16.92■□□□□ 0.3
DDX41-215ENST00000512431 GRM1Q13255 1194 aa16.92■□□□□ 0.3
DDX41-215ENST00000512431 AMER1Q5JTC6 1135 aaPredicted RBP16.92■□□□□ 0.3
DDX41-215ENST00000512431 CAPNS2Q96L46 248 aa16.92■□□□□ 0.3
DDX41-215ENST00000512431 GJA3Q9Y6H8 435 aa16.92■□□□□ 0.3
DDX41-215ENST00000512431 KLRG2A4D1S0 409 aaPredicted RBP16.91■□□□□ 0.3
DDX41-215ENST00000512431 U2SURPO15042 1029 aaKnown RBP16.91■□□□□ 0.3
DDX41-215ENST00000512431 OLFM4Q6UX06 510 aa16.91■□□□□ 0.3
DDX41-215ENST00000512431 GPR101Q96P66 508 aaPredicted RBP16.91■□□□□ 0.3
DDX41-215ENST00000512431 NIP7Q9Y221 180 aaKnown RBP eCLIP16.91■□□□□ 0.3
DDX41-215ENST00000512431 FAM177BA6PVY3 158 aa16.9■□□□□ 0.3
DDX41-215ENST00000512431 RGS19P49795 217 aa16.9■□□□□ 0.3
DDX41-215ENST00000512431 CFAP44Q96MT7 982 aa16.9■□□□□ 0.3
DDX41-215ENST00000512431 USP16Q9Y5T5 823 aa16.9■□□□□ 0.3
DDX41-215ENST00000512431 PIP4K2AP48426 406 aaPredicted RBP16.89■□□□□ 0.29
DDX41-215ENST00000512431 CYP4F22Q6NT55 531 aa16.89■□□□□ 0.29
DDX41-215ENST00000512431 PSMD1Q99460 953 aa16.89■□□□□ 0.29
DDX41-215ENST00000512431 ADAMTSL1Q8N6G6 1762 aa16.89■□□□□ 0.29
DDX41-215ENST00000512431 RGL2O15211 777 aa16.88■□□□□ 0.29
DDX41-215ENST00000512431 CC2D2BQ6DHV5 1058 aa16.88■□□□□ 0.29
DDX41-215ENST00000512431 KCNQ3O43525 872 aa16.87■□□□□ 0.29
DDX41-215ENST00000512431 SNRPA1P09661 255 aaKnown RBP16.87■□□□□ 0.29
DDX41-215ENST00000512431 MAP2K2P36507 400 aa16.87■□□□□ 0.29
DDX41-215ENST00000512431 USP50Q70EL3 339 aaPredicted RBP16.87■□□□□ 0.29
DDX41-215ENST00000512431 CA12O43570 354 aa16.86■□□□□ 0.29
DDX41-215ENST00000512431 GRIPAP1Q4V328 841 aa16.86■□□□□ 0.29
DDX41-215ENST00000512431 BCORQ6W2J9 1755 aa16.86■□□□□ 0.29
DDX41-215ENST00000512431 EPS15P42566 896 aa16.85■□□□□ 0.29
DDX41-215ENST00000512431 CC2D1BQ5T0F9 858 aaKnown RBP16.85■□□□□ 0.29
DDX41-215ENST00000512431 LARGE2Q8N3Y3 721 aa16.85■□□□□ 0.29
DDX41-215ENST00000512431 NYXQ9GZU5 481 aa16.85■□□□□ 0.29
DDX41-215ENST00000512431 TLL2Q9Y6L7 1015 aa16.85■□□□□ 0.29
DDX41-215ENST00000512431 CLSPNQ9HAW4 1339 aa16.85■□□□□ 0.29
DDX41-215ENST00000512431 TRIM26Q12899 539 aaPredicted RBP16.84■□□□□ 0.29
DDX41-215ENST00000512431 CST9Q5W186 159 aa16.84■□□□□ 0.29
DDX41-215ENST00000512431 RTF1Q92541 710 aaKnown RBP16.84■□□□□ 0.29
DDX41-215ENST00000512431 RPGRQ92834 1020 aaKnown RBP16.84■□□□□ 0.29
DDX41-215ENST00000512431 TSKSQ9UJT2 592 aa16.84■□□□□ 0.29
DDX41-215ENST00000512431 CEMIPQ8WUJ3 1361 aa16.84■□□□□ 0.29
DDX41-215ENST00000512431 PRAMEF22A3QJZ6 481 aa16.83■□□□□ 0.28
DDX41-215ENST00000512431 SCNN1DP51172 638 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 149.2 ms