RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 BTG4Q9NY30 223 aa15.53■□□□□ 0.08
PCDHA4-202ENST00000512229 PA2G4Q9UQ80 394 aaKnown RBP15.53■□□□□ 0.08
PCDHA4-202ENST00000512229 KINO60870 393 aaKnown RBP15.53■□□□□ 0.08
PCDHA4-202ENST00000512229 CAVIN4Q5BKX8 364 aa15.53■□□□□ 0.08
PCDHA4-202ENST00000512229 IL17REQ8NFR9 667 aa15.53■□□□□ 0.08
PCDHA4-202ENST00000512229 CCDC83Q8IWF9 413 aa15.52■□□□□ 0.08
PCDHA4-202ENST00000512229 SNRKQ9NRH2 765 aa15.52■□□□□ 0.08
PCDHA4-202ENST00000512229 LIMCH1Q9UPQ0 1083 aa15.52■□□□□ 0.08
PCDHA4-202ENST00000512229 A2ML1A8K2U0 1454 aa15.52■□□□□ 0.08
PCDHA4-202ENST00000512229 PCDH11XQ9BZA7 1347 aa15.52■□□□□ 0.08
PCDHA4-202ENST00000512229 PCDH11YQ9BZA8 1340 aa15.52■□□□□ 0.08
PCDHA4-202ENST00000512229 LETM1O95202 739 aaPredicted RBP15.52■□□□□ 0.08
PCDHA4-202ENST00000512229 STK38Q15208 465 aa15.52■□□□□ 0.08
PCDHA4-202ENST00000512229 MAP3K12Q12852 859 aa15.52■□□□□ 0.07
PCDHA4-202ENST00000512229 KIAA0232Q92628 1395 aa15.52■□□□□ 0.07
PCDHA4-202ENST00000512229 SLC5A1P13866 664 aa15.51■□□□□ 0.07
PCDHA4-202ENST00000512229 SH2B1Q9NRF2 756 aaPredicted RBP15.51■□□□□ 0.07
PCDHA4-202ENST00000512229 CCDC69A6NI79 296 aa15.51■□□□□ 0.07
PCDHA4-202ENST00000512229 ACSBG1Q96GR2 724 aa15.51■□□□□ 0.07
PCDHA4-202ENST00000512229 TRPM1Q7Z4N2 1603 aa15.51■□□□□ 0.07
PCDHA4-202ENST00000512229 KLHL34Q8N239 644 aa15.5■□□□□ 0.07
PCDHA4-202ENST00000512229 UBAC1Q9BSL1 405 aa15.5■□□□□ 0.07
PCDHA4-202ENST00000512229 USP6P35125 1406 aa15.5■□□□□ 0.07
PCDHA4-202ENST00000512229 DDX11Q96FC9 970 aa15.5■□□□□ 0.07
PCDHA4-202ENST00000512229 ESYT1Q9BSJ8 1104 aa15.5■□□□□ 0.07
PCDHA4-202ENST00000512229 EIF4A1P60842 406 aaKnown RBP15.5■□□□□ 0.07
PCDHA4-202ENST00000512229 CCDC47Q96A33 483 aaKnown RBP15.5■□□□□ 0.07
PCDHA4-202ENST00000512229 CDC5LQ99459 802 aaKnown RBP15.5■□□□□ 0.07
PCDHA4-202ENST00000512229 USP19O94966 1318 aa15.49■□□□□ 0.07
PCDHA4-202ENST00000512229 HMGB1P09429 215 aaKnown RBP15.49■□□□□ 0.07
PCDHA4-202ENST00000512229 IL15P40933 162 aaPredicted RBP15.49■□□□□ 0.07
PCDHA4-202ENST00000512229 NUP133Q8WUM0 1156 aa15.49■□□□□ 0.07
PCDHA4-202ENST00000512229 SLC52A2Q9HAB3 445 aa15.49■□□□□ 0.07
PCDHA4-202ENST00000512229 TPM3P06753 285 aa15.49■□□□□ 0.07
PCDHA4-202ENST00000512229 ATP6V1AP38606 617 aa15.49■□□□□ 0.07
PCDHA4-202ENST00000512229 SF3B2Q13435 895 aaKnown RBP15.49■□□□□ 0.07
PCDHA4-202ENST00000512229 CDKL5O76039 1030 aa15.49■□□□□ 0.07
PCDHA4-202ENST00000512229 SEC24BO95487 1268 aa15.49■□□□□ 0.07
PCDHA4-202ENST00000512229 FERMT3Q86UX7 667 aa15.49■□□□□ 0.07
PCDHA4-202ENST00000512229 JMYQ8N9B5 988 aa15.49■□□□□ 0.07
PCDHA4-202ENST00000512229 SMARCC1Q92922 1105 aaPredicted RBP15.49■□□□□ 0.07
PCDHA4-202ENST00000512229 NAPBQ9H115 298 aa15.49■□□□□ 0.07
PCDHA4-202ENST00000512229 BCORL1Q5H9F3 1711 aa15.48■□□□□ 0.07
PCDHA4-202ENST00000512229 DDX46Q7L014 1031 aaKnown RBP15.48■□□□□ 0.07
PCDHA4-202ENST00000512229 SPHKAPQ2M3C7 1700 aa15.48■□□□□ 0.07
PCDHA4-202ENST00000512229 TMEM94Q12767 1356 aa15.48■□□□□ 0.07
PCDHA4-202ENST00000512229 ME1P48163 572 aa15.48■□□□□ 0.07
PCDHA4-202ENST00000512229 C8orf37Q96NL8 207 aa15.48■□□□□ 0.07
PCDHA4-202ENST00000512229 ZNF496Q96IT1 587 aaPredicted RBP15.47■□□□□ 0.07
PCDHA4-202ENST00000512229 CFAP45Q9UL16 551 aa15.47■□□□□ 0.07
PCDHA4-202ENST00000512229 ZNF213O14771 459 aa15.47■□□□□ 0.07
PCDHA4-202ENST00000512229 NAT10Q9H0A0 1025 aaKnown RBP15.47■□□□□ 0.07
PCDHA4-202ENST00000512229 TSPY26PQ9H489 355 aa15.47■□□□□ 0.07
PCDHA4-202ENST00000512229 LMTK3Q96Q04 1460 aa15.47■□□□□ 0.07
PCDHA4-202ENST00000512229 NPHP4O75161 1426 aaPredicted RBP15.47■□□□□ 0.07
PCDHA4-202ENST00000512229 ARHGEF25Q86VW2 580 aa15.47■□□□□ 0.07
PCDHA4-202ENST00000512229 LARP6Q9BRS8 491 aaKnown RBP15.47■□□□□ 0.07
PCDHA4-202ENST00000512229 CTDP1Q9Y5B0 961 aaPredicted RBP15.47■□□□□ 0.07
PCDHA4-202ENST00000512229 TTC41PQ6P2S7 1318 aa15.47■□□□□ 0.07
PCDHA4-202ENST00000512229 SSFA2P28290 1259 aa15.46■□□□□ 0.07
PCDHA4-202ENST00000512229 TNPO1Q92973 898 aaKnown RBP15.46■□□□□ 0.07
PCDHA4-202ENST00000512229 PHF23Q9BUL5 403 aaPredicted RBP15.46■□□□□ 0.07
PCDHA4-202ENST00000512229 TPM1P09493 284 aa15.46■□□□□ 0.07
PCDHA4-202ENST00000512229 TSR1Q2NL82 804 aaKnown RBP15.46■□□□□ 0.07
PCDHA4-202ENST00000512229 ANKRD20A12PQ8NF67 263 aa15.46■□□□□ 0.07
PCDHA4-202ENST00000512229 SPATA32Q96LK8 384 aa15.46■□□□□ 0.07
PCDHA4-202ENST00000512229 IGSF1Q8N6C5 1336 aa15.46■□□□□ 0.07
PCDHA4-202ENST00000512229 ANAPC15P60006 121 aa15.46■□□□□ 0.06
PCDHA4-202ENST00000512229 TTF1Q15361 905 aaPredicted RBP15.46■□□□□ 0.06
PCDHA4-202ENST00000512229 BICC1Q9H694 974 aaKnown RBP15.46■□□□□ 0.06
PCDHA4-202ENST00000512229 ANKIB1Q9P2G1 1089 aa15.46■□□□□ 0.06
PCDHA4-202ENST00000512229 MINDY4BA8MYZ0 360 aa15.45■□□□□ 0.06
PCDHA4-202ENST00000512229 ATP2B3Q16720 1220 aa15.45■□□□□ 0.06
PCDHA4-202ENST00000512229 SAMD1Q6SPF0 538 aaPredicted RBP15.45■□□□□ 0.06
PCDHA4-202ENST00000512229 DZIP3Q86Y13 1208 aaKnown RBP15.45■□□□□ 0.06
PCDHA4-202ENST00000512229 IL27Q8NEV9 243 aa15.45■□□□□ 0.06
PCDHA4-202ENST00000512229 LMTK2Q8IWU2 1503 aa15.45■□□□□ 0.06
PCDHA4-202ENST00000512229 NBPF7P0C2Y1 421 aaPredicted RBP15.45■□□□□ 0.06
PCDHA4-202ENST00000512229 METTL22Q9BUU2 404 aaPredicted RBP15.45■□□□□ 0.06
PCDHA4-202ENST00000512229 HMG20BQ9P0W2 317 aa15.45■□□□□ 0.06
PCDHA4-202ENST00000512229 CCDC152Q4G0S7 254 aa15.44■□□□□ 0.06
PCDHA4-202ENST00000512229 ABCC4O15439 1325 aa15.44■□□□□ 0.06
PCDHA4-202ENST00000512229 E9PCH4 1651 aa15.44■□□□□ 0.06
PCDHA4-202ENST00000512229 GIGYF1O75420 1035 aaPredicted RBP15.44■□□□□ 0.06
PCDHA4-202ENST00000512229 IKQ13123 557 aaPredicted RBP15.44■□□□□ 0.06
PCDHA4-202ENST00000512229 PLBD2Q8NHP8 589 aa15.44■□□□□ 0.06
PCDHA4-202ENST00000512229 OTUD7AQ8TE49 926 aaPredicted RBP15.44■□□□□ 0.06
PCDHA4-202ENST00000512229 AK7Q96M32 723 aa15.44■□□□□ 0.06
PCDHA4-202ENST00000512229 KCNQ3O43525 872 aa15.43■□□□□ 0.06
PCDHA4-202ENST00000512229 CCDC192P0DO97 292 aa15.43■□□□□ 0.06
PCDHA4-202ENST00000512229 NEK1Q96PY6 1258 aa15.43■□□□□ 0.06
PCDHA4-202ENST00000512229 TNMDQ9H2S6 317 aa15.43■□□□□ 0.06
PCDHA4-202ENST00000512229 NIP7Q9Y221 180 aaKnown RBP eCLIP15.43■□□□□ 0.06
PCDHA4-202ENST00000512229 PNMA6EA0A0J9YXQ4 647 aa15.43■□□□□ 0.06
PCDHA4-202ENST00000512229 A1BGP04217 495 aa15.43■□□□□ 0.06
PCDHA4-202ENST00000512229 TPM2P07951 284 aa15.43■□□□□ 0.06
PCDHA4-202ENST00000512229 UQCRFS1P1P0C7P4 283 aa15.43■□□□□ 0.06
PCDHA4-202ENST00000512229 RFC4P35249 363 aa15.43■□□□□ 0.06
PCDHA4-202ENST00000512229 OLFM4Q6UX06 510 aa15.43■□□□□ 0.06
PCDHA4-202ENST00000512229 SNX21Q969T3 373 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms