RNA–Protein interactions for RNA: ENST00000511905.5

SPOCK3-219, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 2

Gene SPOCK3, Length 1,700 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-219ENST00000511905 LSG1Q9H089 658 aaKnown RBP25.01■■□□□ 1.59
SPOCK3-219ENST00000511905 NLRP2Q9NX02 1062 aa25.01■■□□□ 1.59
SPOCK3-219ENST00000511905 ZDHHC9Q9Y397 364 aa25.01■■□□□ 1.59
SPOCK3-219ENST00000511905 DDX49Q9Y6V7 483 aaKnown RBP25.01■■□□□ 1.59
SPOCK3-219ENST00000511905 MEGF6O75095 1541 aa25■■□□□ 1.59
SPOCK3-219ENST00000511905 PARP4Q9UKK3 1724 aaKnown RBP25■■□□□ 1.59
SPOCK3-219ENST00000511905 BRD1O95696 1058 aa25■■□□□ 1.59
SPOCK3-219ENST00000511905 NEXNQ0ZGT2 675 aa25■■□□□ 1.59
SPOCK3-219ENST00000511905 C5P01031 1676 aa24.99■■□□□ 1.59
SPOCK3-219ENST00000511905 HIP1O00291 1037 aa24.99■■□□□ 1.59
SPOCK3-219ENST00000511905 ZNF445P59923 1031 aa24.99■■□□□ 1.59
SPOCK3-219ENST00000511905 KIAA1211Q6ZU35 1233 aa24.99■■□□□ 1.59
SPOCK3-219ENST00000511905 STRCP1A6NGW2 1772 aa24.99■■□□□ 1.59
SPOCK3-219ENST00000511905 PRAMEF22A3QJZ6 481 aa24.98■■□□□ 1.59
SPOCK3-219ENST00000511905 SNRPA1P09661 255 aaKnown RBP24.98■■□□□ 1.59
SPOCK3-219ENST00000511905 CWF19L2Q2TBE0 894 aaKnown RBP24.98■■□□□ 1.59
SPOCK3-219ENST00000511905 MCTP1Q6DN14 999 aa24.98■■□□□ 1.59
SPOCK3-219ENST00000511905 KCNB2Q92953 911 aa24.98■■□□□ 1.59
SPOCK3-219ENST00000511905 EVI5LQ96CN4 794 aa24.98■■□□□ 1.59
SPOCK3-219ENST00000511905 KAZALD1Q96I82 304 aa24.98■■□□□ 1.59
SPOCK3-219ENST00000511905 SUCLG2Q96I99 432 aa24.98■■□□□ 1.59
SPOCK3-219ENST00000511905 METTL22Q9BUU2 404 aaPredicted RBP24.98■■□□□ 1.59
SPOCK3-219ENST00000511905 SPATA31A3Q5VYP0 1347 aa24.98■■□□□ 1.59
SPOCK3-219ENST00000511905 IFIT2P09913 472 aaKnown RBP24.98■■□□□ 1.59
SPOCK3-219ENST00000511905 IGKV5-2P06315 115 aa24.97■■□□□ 1.59
SPOCK3-219ENST00000511905 RIC3Q7Z5B4 369 aa24.97■■□□□ 1.59
SPOCK3-219ENST00000511905 SNRKQ9NRH2 765 aa24.97■■□□□ 1.59
SPOCK3-219ENST00000511905 G3BP1Q13283 466 aaKnown RBP eCLIP24.96■■□□□ 1.59
SPOCK3-219ENST00000511905 IL25Q9H293 177 aa24.96■■□□□ 1.59
SPOCK3-219ENST00000511905 ERBB4Q15303 1308 aa24.96■■□□□ 1.59
SPOCK3-219ENST00000511905 NEURL1BA8MQ27 555 aa24.95■■□□□ 1.59
SPOCK3-219ENST00000511905 PKP1Q13835 747 aa24.95■■□□□ 1.59
SPOCK3-219ENST00000511905 LRP10Q7Z4F1 713 aa24.95■■□□□ 1.59
SPOCK3-219ENST00000511905 NFATC2IPQ8NCF5 419 aa24.95■■□□□ 1.59
SPOCK3-219ENST00000511905 SNX14Q9Y5W7 946 aa24.95■■□□□ 1.59
SPOCK3-219ENST00000511905 TTC14Q96N46 770 aa24.95■■□□□ 1.58
SPOCK3-219ENST00000511905 FMNL2Q96PY5 1086 aa24.95■■□□□ 1.58
SPOCK3-219ENST00000511905 TM6SF1Q9BZW5 370 aa24.95■■□□□ 1.58
SPOCK3-219ENST00000511905 DIAPH3Q9NSV4 1193 aa24.95■■□□□ 1.58
SPOCK3-219ENST00000511905 GCKRQ14397 625 aa24.94■■□□□ 1.58
SPOCK3-219ENST00000511905 GAS2L3Q86XJ1 694 aa24.94■■□□□ 1.58
SPOCK3-219ENST00000511905 BICC1Q9H694 974 aaKnown RBP24.94■■□□□ 1.58
SPOCK3-219ENST00000511905 TTC5Q8N0Z6 440 aa24.93■■□□□ 1.58
SPOCK3-219ENST00000511905 SASH1O94885 1247 aa24.92■■□□□ 1.58
SPOCK3-219ENST00000511905 ZNF496Q96IT1 587 aaPredicted RBP24.92■■□□□ 1.58
SPOCK3-219ENST00000511905 MBD3O95983 291 aa24.92■■□□□ 1.58
SPOCK3-219ENST00000511905 CSB-PGBD3P0DP91 1061 aa24.92■■□□□ 1.58
SPOCK3-219ENST00000511905 XAGE3Q8WTP9 111 aa24.92■■□□□ 1.58
SPOCK3-219ENST00000511905 PANK2Q9BZ23 570 aa24.92■■□□□ 1.58
SPOCK3-219ENST00000511905 RTN4Q9NQC3 1192 aaKnown RBP24.92■■□□□ 1.58
SPOCK3-219ENST00000511905 LAMB4A4D0S4 1761 aa24.91■■□□□ 1.58
SPOCK3-219ENST00000511905 CYP27B1O15528 508 aa24.91■■□□□ 1.58
SPOCK3-219ENST00000511905 MAP4K4O95819 1239 aaPredicted RBP24.91■■□□□ 1.58
SPOCK3-219ENST00000511905 SLC39A6Q13433 755 aa24.91■■□□□ 1.58
SPOCK3-219ENST00000511905 ANKRD13DQ6ZTN6 518 aa24.91■■□□□ 1.58
SPOCK3-219ENST00000511905 AACSQ86V21 672 aa24.91■■□□□ 1.58
SPOCK3-219ENST00000511905 COPRSQ9NQ92 184 aa24.91■■□□□ 1.58
SPOCK3-219ENST00000511905 COPS6Q7L5N1 327 aa24.9■■□□□ 1.58
SPOCK3-219ENST00000511905 PA2G4Q9UQ80 394 aaKnown RBP24.9■■□□□ 1.58
SPOCK3-219ENST00000511905 AIMP1Q12904 312 aaKnown RBP24.89■■□□□ 1.58
SPOCK3-219ENST00000511905 WDR33Q9C0J8 1336 aaKnown RBP24.89■■□□□ 1.58
SPOCK3-219ENST00000511905 RABL6Q3YEC7 729 aaPredicted RBP24.89■■□□□ 1.57
SPOCK3-219ENST00000511905 CWC27Q6UX04 472 aaKnown RBP24.89■■□□□ 1.57
SPOCK3-219ENST00000511905 UPF3BQ9BZI7 483 aaKnown RBP24.89■■□□□ 1.57
SPOCK3-219ENST00000511905 LIMCH1Q9UPQ0 1083 aa24.89■■□□□ 1.57
SPOCK3-219ENST00000511905 GLI3P10071 1580 aa24.87■■□□□ 1.57
SPOCK3-219ENST00000511905 TICAM2Q86XR7 235 aa24.87■■□□□ 1.57
SPOCK3-219ENST00000511905 EAF2Q96CJ1 260 aaPredicted RBP24.87■■□□□ 1.57
SPOCK3-219ENST00000511905 RFX7Q2KHR2 1363 aa24.87■■□□□ 1.57
SPOCK3-219ENST00000511905 PRPF40AO75400 957 aaKnown RBP24.86■■□□□ 1.57
SPOCK3-219ENST00000511905 PDIA4P13667 645 aaKnown RBP24.86■■□□□ 1.57
SPOCK3-219ENST00000511905 VPS53Q5VIR6 699 aa24.86■■□□□ 1.57
SPOCK3-219ENST00000511905 ZSCAN31Q96LW9 406 aaPredicted RBP24.86■■□□□ 1.57
SPOCK3-219ENST00000511905 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.86■■□□□ 1.57
SPOCK3-219ENST00000511905 CABP4P57796 275 aa24.86■■□□□ 1.57
SPOCK3-219ENST00000511905 NECTIN1Q15223 517 aa24.86■■□□□ 1.57
SPOCK3-219ENST00000511905 ZSCAN23Q3MJ62 389 aa24.86■■□□□ 1.57
SPOCK3-219ENST00000511905 RASEFQ8IZ41 740 aa24.86■■□□□ 1.57
SPOCK3-219ENST00000511905 KLHL34Q8N239 644 aa24.86■■□□□ 1.57
SPOCK3-219ENST00000511905 MYD88Q99836 296 aa24.86■■□□□ 1.57
SPOCK3-219ENST00000511905 PLBD2Q8NHP8 589 aa24.85■■□□□ 1.57
SPOCK3-219ENST00000511905 ZSWIM6Q9HCJ5 1215 aa24.85■■□□□ 1.57
SPOCK3-219ENST00000511905 USP16Q9Y5T5 823 aa24.85■■□□□ 1.57
SPOCK3-219ENST00000511905 CCDC171Q6TFL3 1326 aa24.84■■□□□ 1.57
SPOCK3-219ENST00000511905 CCDC173Q0VFZ6 552 aa24.84■■□□□ 1.57
SPOCK3-219ENST00000511905 PPP1R9BQ96SB3 815 aa24.84■■□□□ 1.57
SPOCK3-219ENST00000511905 SH2B1Q9NRF2 756 aaPredicted RBP24.84■■□□□ 1.57
SPOCK3-219ENST00000511905 ERVV-2B6SEH9 535 aa24.83■■□□□ 1.57
SPOCK3-219ENST00000511905 MYL6BP14649 208 aa24.83■■□□□ 1.57
SPOCK3-219ENST00000511905 RFX5P48382 616 aaPredicted RBP24.83■■□□□ 1.57
SPOCK3-219ENST00000511905 GPT2Q8TD30 523 aa24.83■■□□□ 1.57
SPOCK3-219ENST00000511905 MAP4K1Q92918 833 aa24.83■■□□□ 1.57
SPOCK3-219ENST00000511905 WDR17Q8IZU2 1322 aa24.83■■□□□ 1.57
SPOCK3-219ENST00000511905 NKX1-1Q15270 411 aaPredicted RBP24.83■■□□□ 1.57
SPOCK3-219ENST00000511905 ALDH8A1Q9H2A2 487 aaPredicted RBP24.83■■□□□ 1.57
SPOCK3-219ENST00000511905 JCADQ9P266 1359 aa24.82■■□□□ 1.56
SPOCK3-219ENST00000511905 PCDH11XQ9BZA7 1347 aa24.82■■□□□ 1.56
SPOCK3-219ENST00000511905 PCDH11YQ9BZA8 1340 aa24.82■■□□□ 1.56
SPOCK3-219ENST00000511905 ARFGEF2Q9Y6D5 1785 aa24.82■■□□□ 1.56
SPOCK3-219ENST00000511905 AK2P54819 239 aa24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms