RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 LOC102724428A0A0B4J2F2 783 aa18.94■□□□□ 0.62
SCLT1-209ENST00000511426 IGKV5-2P06315 115 aa18.94■□□□□ 0.62
SCLT1-209ENST00000511426 RGS3P49796 1198 aa18.94■□□□□ 0.62
SCLT1-209ENST00000511426 SIK1P57059 783 aa18.94■□□□□ 0.62
SCLT1-209ENST00000511426 SSH3Q8TE77 659 aa18.94■□□□□ 0.62
SCLT1-209ENST00000511426 ACSBG1Q96GR2 724 aa18.94■□□□□ 0.62
SCLT1-209ENST00000511426 QTRT2Q9H974 415 aaKnown RBP18.94■□□□□ 0.62
SCLT1-209ENST00000511426 NUP188Q5SRE5 1749 aa18.94■□□□□ 0.62
SCLT1-209ENST00000511426 RREB1Q92766 1687 aa18.94■□□□□ 0.62
SCLT1-209ENST00000511426 GCKRQ14397 625 aa18.93■□□□□ 0.62
SCLT1-209ENST00000511426 KIF6Q6ZMV9 814 aa18.93■□□□□ 0.62
SCLT1-209ENST00000511426 SLC4A9Q96Q91 983 aa18.93■□□□□ 0.62
SCLT1-209ENST00000511426 NBPF7P0C2Y1 421 aaPredicted RBP18.92■□□□□ 0.62
SCLT1-209ENST00000511426 HSP90AB3PQ58FF7 597 aa18.92■□□□□ 0.62
SCLT1-209ENST00000511426 MYD88Q99836 296 aa18.92■□□□□ 0.62
SCLT1-209ENST00000511426 TRIM28Q13263 835 aaKnown RBP18.92■□□□□ 0.62
SCLT1-209ENST00000511426 CWF19L2Q2TBE0 894 aaKnown RBP18.92■□□□□ 0.62
SCLT1-209ENST00000511426 ANKRD45Q5TZF3 282 aa18.92■□□□□ 0.62
SCLT1-209ENST00000511426 NPM2Q86SE8 214 aaKnown RBP18.92■□□□□ 0.62
SCLT1-209ENST00000511426 SEPT12Q8IYM1 358 aa18.92■□□□□ 0.62
SCLT1-209ENST00000511426 CCDC191Q8NCU4 936 aa18.92■□□□□ 0.62
SCLT1-209ENST00000511426 POLA2Q14181 598 aa18.91■□□□□ 0.62
SCLT1-209ENST00000511426 FAM161AQ3B820 660 aa18.91■□□□□ 0.62
SCLT1-209ENST00000511426 HSP90AB4PQ58FF6 505 aa18.91■□□□□ 0.62
SCLT1-209ENST00000511426 ERVV-1B6SEH8 477 aa18.9■□□□□ 0.62
SCLT1-209ENST00000511426 HMGB2P26583 209 aaKnown RBP18.9■□□□□ 0.62
SCLT1-209ENST00000511426 ATP6V1AP38606 617 aa18.9■□□□□ 0.62
SCLT1-209ENST00000511426 MAP3K15Q6ZN16 1313 aa18.9■□□□□ 0.62
SCLT1-209ENST00000511426 RGL2O15211 777 aa18.89■□□□□ 0.61
SCLT1-209ENST00000511426 RAB11FIP3O75154 756 aa18.89■□□□□ 0.61
SCLT1-209ENST00000511426 PIP4K2AP48426 406 aaPredicted RBP18.89■□□□□ 0.61
SCLT1-209ENST00000511426 TTLL7Q6ZT98 887 aa18.89■□□□□ 0.61
SCLT1-209ENST00000511426 BACH2Q9BYV9 841 aa18.89■□□□□ 0.61
SCLT1-209ENST00000511426 CCDC87Q9NVE4 849 aa18.89■□□□□ 0.61
SCLT1-209ENST00000511426 PDE4AP27815 886 aa18.89■□□□□ 0.61
SCLT1-209ENST00000511426 CWC25Q9NXE8 425 aaPredicted RBP18.89■□□□□ 0.61
SCLT1-209ENST00000511426 PNMA6EA0A0J9YXQ4 647 aa18.88■□□□□ 0.61
SCLT1-209ENST00000511426 KCNQ2O43526 872 aa18.88■□□□□ 0.61
SCLT1-209ENST00000511426 LNPKQ9C0E8 428 aa18.88■□□□□ 0.61
SCLT1-209ENST00000511426 ZBTB1Q9Y2K1 713 aa18.88■□□□□ 0.61
SCLT1-209ENST00000511426 COL5A3P25940 1745 aaPredicted RBP18.87■□□□□ 0.61
SCLT1-209ENST00000511426 SRGAP3O43295 1099 aa18.87■□□□□ 0.61
SCLT1-209ENST00000511426 RBM6P78332 1123 aaKnown RBP18.87■□□□□ 0.61
SCLT1-209ENST00000511426 TCIRG1Q13488 830 aa18.87■□□□□ 0.61
SCLT1-209ENST00000511426 GIGYF2Q6Y7W6 1299 aaKnown RBP18.87■□□□□ 0.61
SCLT1-209ENST00000511426 PPP1R42Q7Z4L9 355 aa18.87■□□□□ 0.61
SCLT1-209ENST00000511426 ISCA1Q9BUE6 129 aa18.87■□□□□ 0.61
SCLT1-209ENST00000511426 EIF5P55010 431 aaKnown RBP18.86■□□□□ 0.61
SCLT1-209ENST00000511426 NOP58Q9Y2X3 529 aaKnown RBP18.86■□□□□ 0.61
SCLT1-209ENST00000511426 CNTNAP4Q9C0A0 1308 aa18.86■□□□□ 0.61
SCLT1-209ENST00000511426 AFDNP55196 1824 aaKnown RBP18.86■□□□□ 0.61
SCLT1-209ENST00000511426 CRKLP46109 303 aaKnown RBP18.85■□□□□ 0.61
SCLT1-209ENST00000511426 FAM196AQ6ZSG2 479 aa18.85■□□□□ 0.61
SCLT1-209ENST00000511426 SKAP1Q86WV1 359 aa18.85■□□□□ 0.61
SCLT1-209ENST00000511426 BTAF1O14981 1849 aa18.85■□□□□ 0.61
SCLT1-209ENST00000511426 A0A087WZG4 1122 aa18.85■□□□□ 0.61
SCLT1-209ENST00000511426 H7C1W4 665 aa18.85■□□□□ 0.61
SCLT1-209ENST00000511426 RABL6Q3YEC7 729 aaPredicted RBP18.85■□□□□ 0.61
SCLT1-209ENST00000511426 RC3H1Q5TC82 1133 aaKnown RBP18.85■□□□□ 0.61
SCLT1-209ENST00000511426 INTS5Q6P9B9 1019 aaKnown RBP18.85■□□□□ 0.61
SCLT1-209ENST00000511426 LRRCC1Q9C099 1032 aa18.85■□□□□ 0.61
SCLT1-209ENST00000511426 ZBTB3Q9H5J0 574 aa18.85■□□□□ 0.61
SCLT1-209ENST00000511426 ERC1Q8IUD2 1116 aa18.84■□□□□ 0.61
SCLT1-209ENST00000511426 SUCLG2Q96I99 432 aa18.84■□□□□ 0.61
SCLT1-209ENST00000511426 BCL11BQ9C0K0 894 aaPredicted RBP18.84■□□□□ 0.61
SCLT1-209ENST00000511426 RBM19Q9Y4C8 960 aaKnown RBP18.84■□□□□ 0.61
SCLT1-209ENST00000511426 KAT6BQ8WYB5 2073 aa18.84■□□□□ 0.61
SCLT1-209ENST00000511426 CASP7P55210 303 aa18.83■□□□□ 0.61
SCLT1-209ENST00000511426 ITPK1Q13572 414 aa18.83■□□□□ 0.61
SCLT1-209ENST00000511426 BMP2KLQ5H9B9 411 aa18.83■□□□□ 0.61
SCLT1-209ENST00000511426 SBF2Q86WG5 1849 aa18.83■□□□□ 0.6
SCLT1-209ENST00000511426 DZIP3Q86Y13 1208 aaKnown RBP18.82■□□□□ 0.6
SCLT1-209ENST00000511426 FBXO41Q8TF61 875 aa18.82■□□□□ 0.6
SCLT1-209ENST00000511426 KIF1BPQ96EK5 621 aa18.82■□□□□ 0.6
SCLT1-209ENST00000511426 KAZALD1Q96I82 304 aa18.82■□□□□ 0.6
SCLT1-209ENST00000511426 BICC1Q9H694 974 aaKnown RBP18.82■□□□□ 0.6
SCLT1-209ENST00000511426 LY75O60449 1722 aa18.82■□□□□ 0.6
SCLT1-209ENST00000511426 EIF5BO60841 1220 aaKnown RBP18.82■□□□□ 0.6
SCLT1-209ENST00000511426 C8orf34Q49A92 452 aa18.82■□□□□ 0.6
SCLT1-209ENST00000511426 KRT27Q7Z3Y8 459 aa18.82■□□□□ 0.6
SCLT1-209ENST00000511426 ATP5J2-PTCD1G3V325 749 aa18.81■□□□□ 0.6
SCLT1-209ENST00000511426 UBE3BQ7Z3V4 1068 aa18.81■□□□□ 0.6
SCLT1-209ENST00000511426 OSBPL3Q9H4L5 887 aa18.81■□□□□ 0.6
SCLT1-209ENST00000511426 ZNF330Q9Y3S2 320 aaPredicted RBP18.81■□□□□ 0.6
SCLT1-209ENST00000511426 ANKRD36CQ5JPF3 1778 aa18.81■□□□□ 0.6
SCLT1-209ENST00000511426 SURF6O75683 361 aaKnown RBP18.8■□□□□ 0.6
SCLT1-209ENST00000511426 PCCAP05165 728 aaPredicted RBP18.8■□□□□ 0.6
SCLT1-209ENST00000511426 EXOC6BQ9Y2D4 811 aa18.8■□□□□ 0.6
SCLT1-209ENST00000511426 CDHR2Q9BYE9 1310 aa18.8■□□□□ 0.6
SCLT1-209ENST00000511426 PLA2G12BQ9BX93 195 aa18.79■□□□□ 0.6
SCLT1-209ENST00000511426 AOX1Q06278 1338 aa18.79■□□□□ 0.6
SCLT1-209ENST00000511426 CLEC4GQ6UXB4 293 aa18.79■□□□□ 0.6
SCLT1-209ENST00000511426 PLEKHM2Q8IWE5 1019 aa18.79■□□□□ 0.6
SCLT1-209ENST00000511426 ZBTB38Q8NAP3 1195 aaPredicted RBP18.79■□□□□ 0.6
SCLT1-209ENST00000511426 ZNF652Q9Y2D9 606 aa18.79■□□□□ 0.6
SCLT1-209ENST00000511426 HSP90B1P14625 803 aaKnown RBP18.77■□□□□ 0.6
SCLT1-209ENST00000511426 PARP10Q53GL7 1025 aa18.77■□□□□ 0.6
SCLT1-209ENST00000511426 RHPN1Q8TCX5 695 aa18.77■□□□□ 0.6
SCLT1-209ENST00000511426 AK7Q96M32 723 aa18.77■□□□□ 0.6
SCLT1-209ENST00000511426 COPRSQ9NQ92 184 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms