RNA–Protein interactions for RNA: ENST00000511019.1

TRIO-217, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 430 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-217ENST00000511019 SRGNP10124 158 aa11.1□□□□□ -0.63
TRIO-217ENST00000511019 PIP4K2AP48426 406 aaPredicted RBP11.1□□□□□ -0.63
TRIO-217ENST00000511019 DCTN1Q14203 1278 aa11.1□□□□□ -0.63
TRIO-217ENST00000511019 TAF7Q15545 349 aaPredicted RBP11.1□□□□□ -0.63
TRIO-217ENST00000511019 TPTE2Q6XPS3 522 aa11.1□□□□□ -0.63
TRIO-217ENST00000511019 MASTLQ96GX5 879 aa11.1□□□□□ -0.63
TRIO-217ENST00000511019 ZNF652Q9Y2D9 606 aa11.1□□□□□ -0.63
TRIO-217ENST00000511019 PRAMEF22A3QJZ6 481 aa11.09□□□□□ -0.63
TRIO-217ENST00000511019 SOGA3Q5TF21 947 aa11.09□□□□□ -0.63
TRIO-217ENST00000511019 NBPF5PQ86XG9 351 aaPredicted RBP11.09□□□□□ -0.63
TRIO-217ENST00000511019 JMYQ8N9B5 988 aa11.09□□□□□ -0.63
TRIO-217ENST00000511019 POTECB2RU33 542 aa11.08□□□□□ -0.64
TRIO-217ENST00000511019 TAOK3Q9H2K8 898 aa11.08□□□□□ -0.64
TRIO-217ENST00000511019 NRXN2Q9P2S2 1712 aa11.08□□□□□ -0.64
TRIO-217ENST00000511019 AFDNP55196 1824 aaKnown RBP11.07□□□□□ -0.64
TRIO-217ENST00000511019 RGL2O15211 777 aa11.07□□□□□ -0.64
TRIO-217ENST00000511019 NPR1P16066 1061 aa11.07□□□□□ -0.64
TRIO-217ENST00000511019 GTF2E1P29083 439 aaPredicted RBP11.07□□□□□ -0.64
TRIO-217ENST00000511019 PRPF40BQ6NWY9 871 aaKnown RBP11.07□□□□□ -0.64
TRIO-217ENST00000511019 PNISRQ8TF01 805 aaKnown RBP11.07□□□□□ -0.64
TRIO-217ENST00000511019 MIS18AQ9NYP9 233 aa11.07□□□□□ -0.64
TRIO-217ENST00000511019 NIP7Q9Y221 180 aaKnown RBP eCLIP11.07□□□□□ -0.64
TRIO-217ENST00000511019 UBR2Q8IWV8 1755 aa11.07□□□□□ -0.64
TRIO-217ENST00000511019 LTBP3Q9NS15 1303 aa11.07□□□□□ -0.64
TRIO-217ENST00000511019 FAM177BA6PVY3 158 aa11.06□□□□□ -0.64
TRIO-217ENST00000511019 NBPF26B4DH59 902 aa11.06□□□□□ -0.64
TRIO-217ENST00000511019 DDNO94850 711 aaPredicted RBP11.06□□□□□ -0.64
TRIO-217ENST00000511019 NBPF10Q6P3W6 841 aaKnown RBP11.06□□□□□ -0.64
TRIO-217ENST00000511019 NBPF15Q8N660 670 aa11.06□□□□□ -0.64
TRIO-217ENST00000511019 SBF1O95248 1867 aa11.06□□□□□ -0.64
TRIO-217ENST00000511019 ALDH1B1P30837 517 aa11.05□□□□□ -0.64
TRIO-217ENST00000511019 CCDC93Q567U6 631 aa11.05□□□□□ -0.64
TRIO-217ENST00000511019 NGEFQ8N5V2 710 aa11.05□□□□□ -0.64
TRIO-217ENST00000511019 C7orf43Q8WVR3 580 aa11.05□□□□□ -0.64
TRIO-217ENST00000511019 PNNQ9H307 717 aaKnown RBP11.05□□□□□ -0.64
TRIO-217ENST00000511019 KLRG2A4D1S0 409 aaPredicted RBP11.04□□□□□ -0.64
TRIO-217ENST00000511019 HLFQ16534 295 aa11.04□□□□□ -0.64
TRIO-217ENST00000511019 CHADLQ6NUI6 762 aa11.04□□□□□ -0.64
TRIO-217ENST00000511019 RTKN2Q8IZC4 609 aa11.04□□□□□ -0.64
TRIO-217ENST00000511019 RRP7AQ9Y3A4 280 aaKnown RBP11.04□□□□□ -0.64
TRIO-217ENST00000511019 VIRMAQ69YN4 1812 aaKnown RBP11.04□□□□□ -0.64
TRIO-217ENST00000511019 IQCA1LA6NCM1 817 aa11.03□□□□□ -0.64
TRIO-217ENST00000511019 ERVV-1B6SEH8 477 aa11.03□□□□□ -0.64
TRIO-217ENST00000511019 FKBP4Q02790 459 aaKnown RBP eCLIP11.03□□□□□ -0.64
TRIO-217ENST00000511019 COL13A1Q5TAT6 717 aaPredicted RBP11.03□□□□□ -0.64
TRIO-217ENST00000511019 NYXQ9GZU5 481 aa11.03□□□□□ -0.64
TRIO-217ENST00000511019 TNRC6CQ9HCJ0 1690 aaKnown RBP11.03□□□□□ -0.64
TRIO-217ENST00000511019 WDR90Q96KV7 1748 aa11.02□□□□□ -0.65
TRIO-217ENST00000511019 SIPA1L3O60292 1781 aaPredicted RBP11.02□□□□□ -0.65
TRIO-217ENST00000511019 DLEC1Q9Y238 1755 aa11.02□□□□□ -0.65
TRIO-217ENST00000511019 MYL6BP14649 208 aa11.01□□□□□ -0.65
TRIO-217ENST00000511019 EIF4A1P60842 406 aaKnown RBP11.01□□□□□ -0.65
TRIO-217ENST00000511019 NFE2L2Q16236 605 aa11.01□□□□□ -0.65
TRIO-217ENST00000511019 KIF6Q6ZMV9 814 aa11.01□□□□□ -0.65
TRIO-217ENST00000511019 SYNE4Q8N205 404 aa11.01□□□□□ -0.65
TRIO-217ENST00000511019 PLEKHF1Q96S99 279 aa11.01□□□□□ -0.65
TRIO-217ENST00000511019 ZNF277Q9NRM2 450 aaPredicted RBP11.01□□□□□ -0.65
TRIO-217ENST00000511019 ANKRD31Q8N7Z5 1873 aa11□□□□□ -0.65
TRIO-217ENST00000511019 POTEIP0CG38 1075 aa11□□□□□ -0.65
TRIO-217ENST00000511019 POTEJP0CG39 1038 aa11□□□□□ -0.65
TRIO-217ENST00000511019 CC2D2BQ6DHV5 1058 aa11□□□□□ -0.65
TRIO-217ENST00000511019 OLFM4Q6UX06 510 aa11□□□□□ -0.65
TRIO-217ENST00000511019 LDHDQ86WU2 507 aa11□□□□□ -0.65
TRIO-217ENST00000511019 NUTM1Q86Y26 1132 aa11□□□□□ -0.65
TRIO-217ENST00000511019 TAF1DQ9H5J8 278 aaPredicted RBP11□□□□□ -0.65
TRIO-217ENST00000511019 CREBZFQ9NS37 354 aa11□□□□□ -0.65
TRIO-217ENST00000511019 CLEC11AQ9Y240 323 aa11□□□□□ -0.65
TRIO-217ENST00000511019 SCN7AQ01118 1682 aa11□□□□□ -0.65
TRIO-217ENST00000511019 MAP3K15Q6ZN16 1313 aa11□□□□□ -0.65
TRIO-217ENST00000511019 MAPK8IP3Q9UPT6 1336 aa11□□□□□ -0.65
TRIO-217ENST00000511019 HSPA1AP0DMV8 641 aaKnown RBP10.99□□□□□ -0.65
TRIO-217ENST00000511019 HSPA1BP0DMV9 641 aaKnown RBP10.99□□□□□ -0.65
TRIO-217ENST00000511019 GPTP24298 496 aa10.99□□□□□ -0.65
TRIO-217ENST00000511019 IARSP41252 1262 aaKnown RBP10.99□□□□□ -0.65
TRIO-217ENST00000511019 EAPPQ56P03 285 aaPredicted RBP10.99□□□□□ -0.65
TRIO-217ENST00000511019 TTLL7Q6ZT98 887 aa10.99□□□□□ -0.65
TRIO-217ENST00000511019 TNS4Q8IZW8 715 aa10.99□□□□□ -0.65
TRIO-217ENST00000511019 JDP2Q8WYK2 163 aa10.99□□□□□ -0.65
TRIO-217ENST00000511019 RPGRQ92834 1020 aaKnown RBP10.99□□□□□ -0.65
TRIO-217ENST00000511019 L3MBTL3Q96JM7 780 aaPredicted RBP10.99□□□□□ -0.65
TRIO-217ENST00000511019 THUMPD2Q9BTF0 503 aaKnown RBP10.99□□□□□ -0.65
TRIO-217ENST00000511019 ZBTB3Q9H5J0 574 aa10.99□□□□□ -0.65
TRIO-217ENST00000511019 MKRN1Q9UHC7 482 aaKnown RBP10.99□□□□□ -0.65
TRIO-217ENST00000511019 SLX4Q8IY92 1834 aa10.98□□□□□ -0.65
TRIO-217ENST00000511019 CRY2Q49AN0 593 aa10.98□□□□□ -0.65
TRIO-217ENST00000511019 GRIPAP1Q4V328 841 aa10.98□□□□□ -0.65
TRIO-217ENST00000511019 SUSD4Q5VX71 490 aa10.98□□□□□ -0.65
TRIO-217ENST00000511019 PNMA8AQ86V59 439 aaPredicted RBP10.98□□□□□ -0.65
TRIO-217ENST00000511019 RBM17Q96I25 401 aaKnown RBP10.98□□□□□ -0.65
TRIO-217ENST00000511019 TMX4Q9H1E5 349 aaPredicted RBP10.98□□□□□ -0.65
TRIO-217ENST00000511019 HACL1Q9UJ83 578 aa10.98□□□□□ -0.65
TRIO-217ENST00000511019 CCDC88AQ3V6T2 1871 aa10.98□□□□□ -0.65
TRIO-217ENST00000511019 CEP350Q5VT06 3117 aa10.97□□□□□ -0.65
TRIO-217ENST00000511019 FZD9O00144 591 aa10.97□□□□□ -0.65
TRIO-217ENST00000511019 EIF2S2P20042 333 aaKnown RBP10.97□□□□□ -0.65
TRIO-217ENST00000511019 HOXA10P31260 410 aaPredicted RBP10.97□□□□□ -0.65
TRIO-217ENST00000511019 EPHX2P34913 555 aa10.97□□□□□ -0.65
TRIO-217ENST00000511019 EIF6P56537 245 aaKnown RBP10.97□□□□□ -0.65
TRIO-217ENST00000511019 RIPK4P57078 832 aa10.97□□□□□ -0.65
TRIO-217ENST00000511019 GIGYF2Q6Y7W6 1299 aaKnown RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms