RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 METTL22Q9BUU2 404 aaPredicted RBP18.28■□□□□ 0.52
PHF3-209ENST00000509330 GCKRQ14397 625 aa18.28■□□□□ 0.52
PHF3-209ENST00000509330 KIF1BPQ96EK5 621 aa18.28■□□□□ 0.52
PHF3-209ENST00000509330 ABCC6O95255 1503 aa18.28■□□□□ 0.52
PHF3-209ENST00000509330 NHSL1Q5SYE7 1610 aa18.27■□□□□ 0.52
PHF3-209ENST00000509330 ROBO1Q9Y6N7 1651 aa18.27■□□□□ 0.52
PHF3-209ENST00000509330 ERVV-2B6SEH9 535 aa18.27■□□□□ 0.51
PHF3-209ENST00000509330 OSBPL3Q9H4L5 887 aa18.27■□□□□ 0.51
PHF3-209ENST00000509330 CHMP3Q9Y3E7 222 aa18.27■□□□□ 0.51
PHF3-209ENST00000509330 MRC1P22897 1456 aa18.26■□□□□ 0.51
PHF3-209ENST00000509330 A0A087WZG4 1122 aa18.26■□□□□ 0.51
PHF3-209ENST00000509330 PIGBQ92521 554 aa18.26■□□□□ 0.51
PHF3-209ENST00000509330 CCDC9Q9Y3X0 531 aaKnown RBP18.26■□□□□ 0.51
PHF3-209ENST00000509330 RAB11FIP3O75154 756 aa18.25■□□□□ 0.51
PHF3-209ENST00000509330 USP26Q9BXU7 913 aa18.25■□□□□ 0.51
PHF3-209ENST00000509330 CCDC8Q9H0W5 538 aaPredicted RBP18.24■□□□□ 0.51
PHF3-209ENST00000509330 PARP4Q9UKK3 1724 aaKnown RBP18.24■□□□□ 0.51
PHF3-209ENST00000509330 IL25Q9H293 177 aa18.24■□□□□ 0.51
PHF3-209ENST00000509330 N4BP2Q86UW6 1770 aaPredicted RBP18.24■□□□□ 0.51
PHF3-209ENST00000509330 HSP90AA1P07900 732 aaKnown RBP18.24■□□□□ 0.51
PHF3-209ENST00000509330 AACSQ86V21 672 aa18.24■□□□□ 0.51
PHF3-209ENST00000509330 DNAJC10Q8IXB1 793 aa18.24■□□□□ 0.51
PHF3-209ENST00000509330 ANO2Q9NQ90 1003 aa18.24■□□□□ 0.51
PHF3-209ENST00000509330 ERC2O15083 957 aa18.23■□□□□ 0.51
PHF3-209ENST00000509330 NKX1-1Q15270 411 aaPredicted RBP18.23■□□□□ 0.51
PHF3-209ENST00000509330 CLASRPQ8N2M8 674 aaKnown RBP18.23■□□□□ 0.51
PHF3-209ENST00000509330 ANTXR1Q9H6X2 564 aa18.23■□□□□ 0.51
PHF3-209ENST00000509330 G3BP1Q13283 466 aaKnown RBP eCLIP18.22■□□□□ 0.51
PHF3-209ENST00000509330 TLR7Q9NYK1 1049 aaKnown RBP18.22■□□□□ 0.51
PHF3-209ENST00000509330 DEKP35659 375 aaKnown RBP18.22■□□□□ 0.51
PHF3-209ENST00000509330 PI4K2BQ8TCG2 481 aa18.22■□□□□ 0.51
PHF3-209ENST00000509330 IFIT2P09913 472 aaKnown RBP18.21■□□□□ 0.51
PHF3-209ENST00000509330 MTX1Q13505 466 aa18.21■□□□□ 0.51
PHF3-209ENST00000509330 ACSBG1Q96GR2 724 aa18.21■□□□□ 0.51
PHF3-209ENST00000509330 SASH1O94885 1247 aa18.21■□□□□ 0.51
PHF3-209ENST00000509330 CHMLP26374 656 aa18.21■□□□□ 0.51
PHF3-209ENST00000509330 PLBD2Q8NHP8 589 aa18.21■□□□□ 0.51
PHF3-209ENST00000509330 CCDC85AQ96PX6 553 aaPredicted RBP18.21■□□□□ 0.51
PHF3-209ENST00000509330 STAP2Q9UGK3 403 aa18.21■□□□□ 0.51
PHF3-209ENST00000509330 HSP90AB4PQ58FF6 505 aa18.21■□□□□ 0.5
PHF3-209ENST00000509330 EXOC5O00471 708 aa18.2■□□□□ 0.5
PHF3-209ENST00000509330 ESYT1Q9BSJ8 1104 aa18.2■□□□□ 0.5
PHF3-209ENST00000509330 REC8O95072 547 aa18.2■□□□□ 0.5
PHF3-209ENST00000509330 ATG3Q9NT62 314 aa18.2■□□□□ 0.5
PHF3-209ENST00000509330 NOL8Q76FK4 1167 aaKnown RBP18.19■□□□□ 0.5
PHF3-209ENST00000509330 EAF2Q96CJ1 260 aaPredicted RBP18.19■□□□□ 0.5
PHF3-209ENST00000509330 UTYO14607 1347 aa18.18■□□□□ 0.5
PHF3-209ENST00000509330 KCPQ6ZWJ8 1503 aa18.18■□□□□ 0.5
PHF3-209ENST00000509330 PRIM1P49642 420 aaKnown RBP18.18■□□□□ 0.5
PHF3-209ENST00000509330 LMBR1LQ6UX01 489 aa18.18■□□□□ 0.5
PHF3-209ENST00000509330 CWC27Q6UX04 472 aaKnown RBP18.18■□□□□ 0.5
PHF3-209ENST00000509330 GLI3P10071 1580 aa18.18■□□□□ 0.5
PHF3-209ENST00000509330 HDAC5Q9UQL6 1122 aa18.18■□□□□ 0.5
PHF3-209ENST00000509330 SHANK3Q9BYB0 1731 aa18.17■□□□□ 0.5
PHF3-209ENST00000509330 PALD1Q9ULE6 856 aa18.17■□□□□ 0.5
PHF3-209ENST00000509330 NDUFB9Q9Y6M9 179 aa18.17■□□□□ 0.5
PHF3-209ENST00000509330 BOLA2Q9H3K6 86 aa18.16■□□□□ 0.5
PHF3-209ENST00000509330 TOGARAM1Q9Y4F4 1720 aa18.16■□□□□ 0.5
PHF3-209ENST00000509330 K7ELQ4 463 aaPredicted RBP18.15■□□□□ 0.5
PHF3-209ENST00000509330 GPTP24298 496 aa18.15■□□□□ 0.5
PHF3-209ENST00000509330 SLC4A9Q96Q91 983 aa18.15■□□□□ 0.5
PHF3-209ENST00000509330 SNX21Q969T3 373 aa18.15■□□□□ 0.5
PHF3-209ENST00000509330 ECHDC1Q9NTX5 307 aa18.15■□□□□ 0.5
PHF3-209ENST00000509330 CWC25Q9NXE8 425 aaPredicted RBP18.15■□□□□ 0.5
PHF3-209ENST00000509330 ERC1Q8IUD2 1116 aa18.15■□□□□ 0.5
PHF3-209ENST00000509330 CNTROBQ8N137 903 aa18.15■□□□□ 0.5
PHF3-209ENST00000509330 EDC3Q96F86 508 aaKnown RBP18.15■□□□□ 0.5
PHF3-209ENST00000509330 ZNF594Q96JF6 807 aaPredicted RBP18.15■□□□□ 0.5
PHF3-209ENST00000509330 TFCP2Q12800 502 aa18.14■□□□□ 0.49
PHF3-209ENST00000509330 PLEKHG2Q9H7P9 1386 aa18.14■□□□□ 0.49
PHF3-209ENST00000509330 MYT1Q01538 1121 aa18.14■□□□□ 0.49
PHF3-209ENST00000509330 PTPN12Q05209 780 aaKnown RBP18.14■□□□□ 0.49
PHF3-209ENST00000509330 RABEP1Q15276 862 aa18.13■□□□□ 0.49
PHF3-209ENST00000509330 SYNE4Q8N205 404 aa18.13■□□□□ 0.49
PHF3-209ENST00000509330 UBAP1LF5GYI3 381 aa18.13■□□□□ 0.49
PHF3-209ENST00000509330 GLRX3O76003 335 aaKnown RBP18.13■□□□□ 0.49
PHF3-209ENST00000509330 DDB1Q16531 1140 aa18.13■□□□□ 0.49
PHF3-209ENST00000509330 UPF3BQ9BZI7 483 aaKnown RBP18.13■□□□□ 0.49
PHF3-209ENST00000509330 FAM89AQ96GI7 184 aa18.12■□□□□ 0.49
PHF3-209ENST00000509330 COL16A1Q07092 1604 aaPredicted RBP18.12■□□□□ 0.49
PHF3-209ENST00000509330 LTBP4Q8N2S1 1624 aa18.12■□□□□ 0.49
PHF3-209ENST00000509330 CHMP5Q9NZZ3 219 aa18.12■□□□□ 0.49
PHF3-209ENST00000509330 ZBTB1Q9Y2K1 713 aa18.12■□□□□ 0.49
PHF3-209ENST00000509330 ARFGEF2Q9Y6D5 1785 aa18.12■□□□□ 0.49
PHF3-209ENST00000509330 NEK4P51957 841 aa18.12■□□□□ 0.49
PHF3-209ENST00000509330 CASP7P55210 303 aa18.12■□□□□ 0.49
PHF3-209ENST00000509330 GPATCH3Q96I76 525 aa18.12■□□□□ 0.49
PHF3-209ENST00000509330 C8orf37Q96NL8 207 aa18.12■□□□□ 0.49
PHF3-209ENST00000509330 AOX1Q06278 1338 aa18.11■□□□□ 0.49
PHF3-209ENST00000509330 AFDNP55196 1824 aaKnown RBP18.11■□□□□ 0.49
PHF3-209ENST00000509330 RFX5P48382 616 aaPredicted RBP18.11■□□□□ 0.49
PHF3-209ENST00000509330 HLFQ16534 295 aa18.11■□□□□ 0.49
PHF3-209ENST00000509330 DIAPH3Q9NSV4 1193 aa18.11■□□□□ 0.49
PHF3-209ENST00000509330 TNS2Q63HR2 1409 aa18.11■□□□□ 0.49
PHF3-209ENST00000509330 STARD3NLO95772 234 aa18.11■□□□□ 0.49
PHF3-209ENST00000509330 TBC1D2BQ9UPU7 963 aa18.11■□□□□ 0.49
PHF3-209ENST00000509330 ERBB4Q15303 1308 aa18.1■□□□□ 0.49
PHF3-209ENST00000509330 DISP2A7MBM2 1401 aa18.1■□□□□ 0.49
PHF3-209ENST00000509330 FAM177BA6PVY3 158 aa18.1■□□□□ 0.49
PHF3-209ENST00000509330 TOM1O60784 492 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms