RNA–Protein interactions for RNA: ENST00000509013.2

SSBP2-211, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5

Gene SSBP2, Length 709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-211ENST00000509013 POTEJP0CG39 1038 aa8.17□□□□□ -1.1
SSBP2-211ENST00000509013 PDE6BP35913 854 aa8.17□□□□□ -1.1
SSBP2-211ENST00000509013 VSIG10Q8N0Z9 540 aa8.17□□□□□ -1.1
SSBP2-211ENST00000509013 BRIP1Q9BX63 1249 aa8.17□□□□□ -1.1
SSBP2-211ENST00000509013 PANK3Q9H999 370 aa8.17□□□□□ -1.1
SSBP2-211ENST00000509013 PDZRN3Q9UPQ7 1066 aa8.17□□□□□ -1.1
SSBP2-211ENST00000509013 MYH14Q7Z406 1995 aaKnown RBP8.17□□□□□ -1.1
SSBP2-211ENST00000509013 A0A087WZG4 1122 aa8.16□□□□□ -1.1
SSBP2-211ENST00000509013 DDNO94850 711 aaPredicted RBP8.16□□□□□ -1.1
SSBP2-211ENST00000509013 STARD3NLO95772 234 aa8.16□□□□□ -1.1
SSBP2-211ENST00000509013 IL13P35225 146 aa8.16□□□□□ -1.1
SSBP2-211ENST00000509013 TJP1Q07157 1748 aa8.16□□□□□ -1.1
SSBP2-211ENST00000509013 CARMIL3Q8ND23 1372 aa8.16□□□□□ -1.1
SSBP2-211ENST00000509013 AIDAQ96BJ3 306 aa8.16□□□□□ -1.1
SSBP2-211ENST00000509013 PRDM10Q9NQV6 1147 aa8.16□□□□□ -1.1
SSBP2-211ENST00000509013 CNTNAP1P78357 1384 aa8.15□□□□□ -1.1
SSBP2-211ENST00000509013 IQCA1LA6NCM1 817 aa8.15□□□□□ -1.1
SSBP2-211ENST00000509013 CCER2I3L3R5 266 aa8.15□□□□□ -1.1
SSBP2-211ENST00000509013 NPHP1O15259 732 aa8.15□□□□□ -1.1
SSBP2-211ENST00000509013 CTCFP49711 727 aaPredicted RBP8.15□□□□□ -1.1
SSBP2-211ENST00000509013 EIF5P55010 431 aaKnown RBP8.15□□□□□ -1.1
SSBP2-211ENST00000509013 TBC1D9BQ66K14 1250 aa8.15□□□□□ -1.1
SSBP2-211ENST00000509013 TTC5Q8N0Z6 440 aa8.15□□□□□ -1.1
SSBP2-211ENST00000509013 CCDC24Q8N4L8 307 aa8.15□□□□□ -1.1
SSBP2-211ENST00000509013 TAOK3Q9H2K8 898 aa8.15□□□□□ -1.1
SSBP2-211ENST00000509013 ADAMTS7Q9UKP4 1686 aa8.14□□□□□ -1.11
SSBP2-211ENST00000509013 LTBP3Q9NS15 1303 aa8.14□□□□□ -1.11
SSBP2-211ENST00000509013 SPDYE4A6NLX3 237 aa8.14□□□□□ -1.11
SSBP2-211ENST00000509013 HMOX1P09601 288 aa8.14□□□□□ -1.11
SSBP2-211ENST00000509013 VEGFBP49765 207 aa8.14□□□□□ -1.11
SSBP2-211ENST00000509013 SOGA3Q5TF21 947 aa8.14□□□□□ -1.11
SSBP2-211ENST00000509013 PRR5LQ6MZQ0 368 aa8.14□□□□□ -1.11
SSBP2-211ENST00000509013 NPM2Q86SE8 214 aaKnown RBP8.14□□□□□ -1.11
SSBP2-211ENST00000509013 LDHDQ86WU2 507 aa8.14□□□□□ -1.11
SSBP2-211ENST00000509013 CNKSR1Q969H4 720 aa8.14□□□□□ -1.11
SSBP2-211ENST00000509013 TBC1D2BQ9UPU7 963 aa8.14□□□□□ -1.11
SSBP2-211ENST00000509013 ZNF330Q9Y3S2 320 aaPredicted RBP8.14□□□□□ -1.11
SSBP2-211ENST00000509013 SBF1O95248 1867 aa8.14□□□□□ -1.11
SSBP2-211ENST00000509013 PASKQ96RG2 1323 aa8.13□□□□□ -1.11
SSBP2-211ENST00000509013 TMEM88BA6NKF7 163 aa8.13□□□□□ -1.11
SSBP2-211ENST00000509013 LBX1P52954 281 aa8.13□□□□□ -1.11
SSBP2-211ENST00000509013 ST5P78524 1137 aa8.13□□□□□ -1.11
SSBP2-211ENST00000509013 MTHFSDQ2M296 383 aaKnown RBP8.13□□□□□ -1.11
SSBP2-211ENST00000509013 EAPPQ56P03 285 aaPredicted RBP8.13□□□□□ -1.11
SSBP2-211ENST00000509013 PRPF40BQ6NWY9 871 aaKnown RBP8.13□□□□□ -1.11
SSBP2-211ENST00000509013 CNBD1Q8NA66 436 aa8.13□□□□□ -1.11
SSBP2-211ENST00000509013 SETDB2Q96T68 719 aa8.13□□□□□ -1.11
SSBP2-211ENST00000509013 TEX13AQ9BXU3 409 aaPredicted RBP8.13□□□□□ -1.11
SSBP2-211ENST00000509013 TAF1DQ9H5J8 278 aaPredicted RBP8.13□□□□□ -1.11
SSBP2-211ENST00000509013 WBP1LQ9NX94 342 aa8.13□□□□□ -1.11
SSBP2-211ENST00000509013 KNSTRNQ9Y448 316 aa8.13□□□□□ -1.11
SSBP2-211ENST00000509013 NRXN2Q9P2S2 1712 aa8.12□□□□□ -1.11
SSBP2-211ENST00000509013 SRGNP10124 158 aa8.12□□□□□ -1.11
SSBP2-211ENST00000509013 STYK1Q6J9G0 422 aa8.12□□□□□ -1.11
SSBP2-211ENST00000509013 MASTLQ96GX5 879 aa8.12□□□□□ -1.11
SSBP2-211ENST00000509013 L3MBTL3Q96JM7 780 aaPredicted RBP8.12□□□□□ -1.11
SSBP2-211ENST00000509013 TIAM2Q8IVF5 1701 aa8.12□□□□□ -1.11
SSBP2-211ENST00000509013 POTEMA6NI47 508 aa8.11□□□□□ -1.11
SSBP2-211ENST00000509013 SLC34A2O95436 690 aa8.11□□□□□ -1.11
SSBP2-211ENST00000509013 ITGBL1O95965 494 aaPredicted RBP8.11□□□□□ -1.11
SSBP2-211ENST00000509013 IL6STP40189 918 aaPredicted RBP8.11□□□□□ -1.11
SSBP2-211ENST00000509013 DEFB115Q30KQ5 88 aa8.11□□□□□ -1.11
SSBP2-211ENST00000509013 ZNF790Q6PG37 636 aa8.11□□□□□ -1.11
SSBP2-211ENST00000509013 ZNF496Q96IT1 587 aaPredicted RBP8.11□□□□□ -1.11
SSBP2-211ENST00000509013 HACL1Q9UJ83 578 aa8.11□□□□□ -1.11
SSBP2-211ENST00000509013 MRC1P22897 1456 aa8.11□□□□□ -1.11
SSBP2-211ENST00000509013 AFDNP55196 1824 aaKnown RBP8.1□□□□□ -1.11
SSBP2-211ENST00000509013 RASSF10A6NK89 507 aa8.1□□□□□ -1.11
SSBP2-211ENST00000509013 CAMTA2O94983 1202 aa8.1□□□□□ -1.11
SSBP2-211ENST00000509013 A1BGP04217 495 aa8.1□□□□□ -1.11
SSBP2-211ENST00000509013 EPHX2P34913 555 aa8.1□□□□□ -1.11
SSBP2-211ENST00000509013 MNX1P50219 401 aaPredicted RBP8.1□□□□□ -1.11
SSBP2-211ENST00000509013 FKBP4Q02790 459 aaKnown RBP eCLIP8.1□□□□□ -1.11
SSBP2-211ENST00000509013 TEFQ10587 303 aa8.1□□□□□ -1.11
SSBP2-211ENST00000509013 FAM161AQ3B820 660 aa8.1□□□□□ -1.11
SSBP2-211ENST00000509013 CCDC93Q567U6 631 aa8.1□□□□□ -1.11
SSBP2-211ENST00000509013 MAP1SQ66K74 1059 aaPredicted RBP8.1□□□□□ -1.11
SSBP2-211ENST00000509013 ABHD8Q96I13 439 aa8.1□□□□□ -1.11
SSBP2-211ENST00000509013 FMNL2Q96PY5 1086 aa8.1□□□□□ -1.11
SSBP2-211ENST00000509013 ZNF277Q9NRM2 450 aaPredicted RBP8.1□□□□□ -1.11
SSBP2-211ENST00000509013 HEG1Q9ULI3 1381 aa8.1□□□□□ -1.11
SSBP2-211ENST00000509013 WDR33Q9C0J8 1336 aaKnown RBP8.09□□□□□ -1.11
SSBP2-211ENST00000509013 DIAPH1O60610 1272 aaKnown RBP8.09□□□□□ -1.11
SSBP2-211ENST00000509013 HSPA8P11142 646 aaKnown RBP8.09□□□□□ -1.11
SSBP2-211ENST00000509013 NPR1P16066 1061 aa8.09□□□□□ -1.11
SSBP2-211ENST00000509013 MAP2K1Q02750 393 aaPredicted RBP8.09□□□□□ -1.11
SSBP2-211ENST00000509013 PNMA8AQ86V59 439 aaPredicted RBP8.09□□□□□ -1.11
SSBP2-211ENST00000509013 NBPF5PQ86XG9 351 aaPredicted RBP8.09□□□□□ -1.11
SSBP2-211ENST00000509013 DZIP3Q86Y13 1208 aaKnown RBP8.09□□□□□ -1.11
SSBP2-211ENST00000509013 CNTROBQ8N137 903 aa8.09□□□□□ -1.11
SSBP2-211ENST00000509013 C7orf43Q8WVR3 580 aa8.09□□□□□ -1.11
SSBP2-211ENST00000509013 DLEC1Q9Y238 1755 aa8.09□□□□□ -1.11
SSBP2-211ENST00000509013 KIF7Q2M1P5 1343 aa8.08□□□□□ -1.12
SSBP2-211ENST00000509013 RNF123Q5XPI4 1314 aa8.08□□□□□ -1.12
SSBP2-211ENST00000509013 ZNF541Q9H0D2 1346 aa8.08□□□□□ -1.12
SSBP2-211ENST00000509013 SCN11AQ9UI33 1791 aa8.08□□□□□ -1.12
SSBP2-211ENST00000509013 GNAT3A8MTJ3 354 aa8.08□□□□□ -1.12
SSBP2-211ENST00000509013 POTEGQ6S5H5 508 aa8.08□□□□□ -1.12
SSBP2-211ENST00000509013 RTKN2Q8IZC4 609 aa8.08□□□□□ -1.12
SSBP2-211ENST00000509013 IL17REQ8NFR9 667 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms