RNA–Protein interactions for RNA: ENST00000508584.1

NFKB1-207, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 3

Gene NFKB1, Length 751 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-207ENST00000508584 YY1P25490 414 aa20.21■□□□□ 0.83
NFKB1-207ENST00000508584 PIP4K2AP48426 406 aaPredicted RBP20.21■□□□□ 0.83
NFKB1-207ENST00000508584 COPS6Q7L5N1 327 aa20.21■□□□□ 0.83
NFKB1-207ENST00000508584 PELP1Q8IZL8 1130 aaKnown RBP20.21■□□□□ 0.83
NFKB1-207ENST00000508584 MTFR1LQ9H019 292 aa20.21■□□□□ 0.83
NFKB1-207ENST00000508584 MAP3K2Q9Y2U5 619 aa20.21■□□□□ 0.83
NFKB1-207ENST00000508584 PALLDQ8WX93 1383 aa20.21■□□□□ 0.83
NFKB1-207ENST00000508584 ATP10DQ9P241 1426 aa20.2■□□□□ 0.82
NFKB1-207ENST00000508584 IGHDP01880 384 aa20.2■□□□□ 0.82
NFKB1-207ENST00000508584 PTGER2P43116 358 aa20.2■□□□□ 0.82
NFKB1-207ENST00000508584 SRCIN1Q9C0H9 1055 aa20.2■□□□□ 0.82
NFKB1-207ENST00000508584 RWDD1Q9H446 243 aaPredicted RBP20.2■□□□□ 0.82
NFKB1-207ENST00000508584 BEND3Q5T5X7 828 aa20.19■□□□□ 0.82
NFKB1-207ENST00000508584 MEIS3Q99687 375 aa20.19■□□□□ 0.82
NFKB1-207ENST00000508584 CYP19A1P11511 503 aaPredicted RBP20.18■□□□□ 0.82
NFKB1-207ENST00000508584 RIC3Q7Z5B4 369 aa20.18■□□□□ 0.82
NFKB1-207ENST00000508584 C1orf115Q9H7X2 142 aa20.18■□□□□ 0.82
NFKB1-207ENST00000508584 LOC102724428A0A0B4J2F2 783 aa20.17■□□□□ 0.82
NFKB1-207ENST00000508584 SIK1P57059 783 aa20.17■□□□□ 0.82
NFKB1-207ENST00000508584 HDAC1Q13547 482 aaPredicted RBP20.17■□□□□ 0.82
NFKB1-207ENST00000508584 SLC27A3Q5K4L6 730 aa20.17■□□□□ 0.82
NFKB1-207ENST00000508584 ANKRD13DQ6ZTN6 518 aa20.17■□□□□ 0.82
NFKB1-207ENST00000508584 ALDH1L1O75891 902 aa20.16■□□□□ 0.82
NFKB1-207ENST00000508584 GNAI3P08754 354 aa20.16■□□□□ 0.82
NFKB1-207ENST00000508584 ATP6V1AP38606 617 aa20.16■□□□□ 0.82
NFKB1-207ENST00000508584 LRRC4BQ9NT99 713 aa20.16■□□□□ 0.82
NFKB1-207ENST00000508584 N4BP2Q86UW6 1770 aaPredicted RBP20.16■□□□□ 0.82
NFKB1-207ENST00000508584 ZNF827Q17R98 1081 aa20.15■□□□□ 0.82
NFKB1-207ENST00000508584 PLBD2Q8NHP8 589 aa20.15■□□□□ 0.82
NFKB1-207ENST00000508584 TJP1Q07157 1748 aa20.15■□□□□ 0.82
NFKB1-207ENST00000508584 BTAF1O14981 1849 aa20.15■□□□□ 0.82
NFKB1-207ENST00000508584 LINS1Q8NG48 757 aa20.14■□□□□ 0.81
NFKB1-207ENST00000508584 METTL22Q9BUU2 404 aaPredicted RBP20.14■□□□□ 0.81
NFKB1-207ENST00000508584 GNAI2P04899 355 aa20.13■□□□□ 0.81
NFKB1-207ENST00000508584 NEXNQ0ZGT2 675 aa20.13■□□□□ 0.81
NFKB1-207ENST00000508584 SGIP1Q9BQI5 828 aa20.13■□□□□ 0.81
NFKB1-207ENST00000508584 FHDC1Q9C0D6 1143 aaPredicted RBP20.13■□□□□ 0.81
NFKB1-207ENST00000508584 USP44Q9H0E7 712 aa20.13■□□□□ 0.81
NFKB1-207ENST00000508584 CICQ96RK0 1608 aaPredicted RBP20.13■□□□□ 0.81
NFKB1-207ENST00000508584 ITPK1Q13572 414 aa20.12■□□□□ 0.81
NFKB1-207ENST00000508584 TTLL7Q6ZT98 887 aa20.12■□□□□ 0.81
NFKB1-207ENST00000508584 AKT1S1Q96B36 256 aa20.12■□□□□ 0.81
NFKB1-207ENST00000508584 SYT17Q9BSW7 474 aa20.12■□□□□ 0.81
NFKB1-207ENST00000508584 IBTKQ9P2D0 1353 aaPredicted RBP20.11■□□□□ 0.81
NFKB1-207ENST00000508584 UBTFL1P0CB47 393 aaPredicted RBP20.11■□□□□ 0.81
NFKB1-207ENST00000508584 RPAP2Q8IXW5 612 aaPredicted RBP20.11■□□□□ 0.81
NFKB1-207ENST00000508584 ANKRD44Q8N8A2 993 aa20.11■□□□□ 0.81
NFKB1-207ENST00000508584 ARXQ96QS3 562 aa20.11■□□□□ 0.81
NFKB1-207ENST00000508584 MYD88Q99836 296 aa20.11■□□□□ 0.81
NFKB1-207ENST00000508584 CCDC87Q9NVE4 849 aa20.11■□□□□ 0.81
NFKB1-207ENST00000508584 ZBTB1Q9Y2K1 713 aa20.11■□□□□ 0.81
NFKB1-207ENST00000508584 ZNF330Q9Y3S2 320 aaPredicted RBP20.11■□□□□ 0.81
NFKB1-207ENST00000508584 KAT6BQ8WYB5 2073 aa20.11■□□□□ 0.81
NFKB1-207ENST00000508584 CWF19L2Q2TBE0 894 aaKnown RBP20.1■□□□□ 0.81
NFKB1-207ENST00000508584 CEP85Q6P2H3 762 aa20.1■□□□□ 0.81
NFKB1-207ENST00000508584 KIF6Q6ZMV9 814 aa20.1■□□□□ 0.81
NFKB1-207ENST00000508584 SLC16A10Q8TF71 515 aa20.1■□□□□ 0.81
NFKB1-207ENST00000508584 IGKV5-2P06315 115 aa20.09■□□□□ 0.81
NFKB1-207ENST00000508584 IL6STP40189 918 aaPredicted RBP20.09■□□□□ 0.81
NFKB1-207ENST00000508584 CRKLP46109 303 aaKnown RBP20.09■□□□□ 0.81
NFKB1-207ENST00000508584 INTS5Q6P9B9 1019 aaKnown RBP20.09■□□□□ 0.81
NFKB1-207ENST00000508584 SIRT2Q8IXJ6 389 aa20.09■□□□□ 0.81
NFKB1-207ENST00000508584 ZNF831Q5JPB2 1677 aa20.09■□□□□ 0.81
NFKB1-207ENST00000508584 NEURL1BA8MQ27 555 aa20.08■□□□□ 0.81
NFKB1-207ENST00000508584 ZBTB3Q9H5J0 574 aa20.08■□□□□ 0.81
NFKB1-207ENST00000508584 C9orf78Q9NZ63 289 aaPredicted RBP20.08■□□□□ 0.81
NFKB1-207ENST00000508584 TFCP2L1Q9NZI6 479 aa20.08■□□□□ 0.81
NFKB1-207ENST00000508584 KCNQ4P56696 695 aa20.07■□□□□ 0.8
NFKB1-207ENST00000508584 HDAC5Q9UQL6 1122 aa20.07■□□□□ 0.8
NFKB1-207ENST00000508584 LRRFIP2Q9Y608 721 aaKnown RBP20.07■□□□□ 0.8
NFKB1-207ENST00000508584 NBPF7P0C2Y1 421 aaPredicted RBP20.06■□□□□ 0.8
NFKB1-207ENST00000508584 NPM2Q86SE8 214 aaKnown RBP20.06■□□□□ 0.8
NFKB1-207ENST00000508584 SMC5Q8IY18 1101 aa20.06■□□□□ 0.8
NFKB1-207ENST00000508584 LINC00116Q8NCU8 138 aa20.06■□□□□ 0.8
NFKB1-207ENST00000508584 CCNL1Q9UK58 526 aaPredicted RBP20.06■□□□□ 0.8
NFKB1-207ENST00000508584 UTYO14607 1347 aa20.05■□□□□ 0.8
NFKB1-207ENST00000508584 MAP3K15Q6ZN16 1313 aa20.05■□□□□ 0.8
NFKB1-207ENST00000508584 GRM8O00222 908 aa20.05■□□□□ 0.8
NFKB1-207ENST00000508584 HMMRO75330 724 aa20.05■□□□□ 0.8
NFKB1-207ENST00000508584 POLD1P28340 1107 aa20.05■□□□□ 0.8
NFKB1-207ENST00000508584 EIF5P55010 431 aaKnown RBP20.05■□□□□ 0.8
NFKB1-207ENST00000508584 GCKRQ14397 625 aa20.05■□□□□ 0.8
NFKB1-207ENST00000508584 ARFGEF2Q9Y6D5 1785 aa20.05■□□□□ 0.8
NFKB1-207ENST00000508584 PNPLA7Q6ZV29 1317 aa20.04■□□□□ 0.8
NFKB1-207ENST00000508584 ATP5J2-PTCD1G3V325 749 aa20.04■□□□□ 0.8
NFKB1-207ENST00000508584 GCC1Q96CN9 775 aa20.04■□□□□ 0.8
NFKB1-207ENST00000508584 CNTNAP4Q9C0A0 1308 aa20.03■□□□□ 0.8
NFKB1-207ENST00000508584 ATP8B2P98198 1209 aa20.03■□□□□ 0.8
NFKB1-207ENST00000508584 PDZRN3Q9UPQ7 1066 aa20.03■□□□□ 0.8
NFKB1-207ENST00000508584 HMGB2P26583 209 aaKnown RBP20.02■□□□□ 0.8
NFKB1-207ENST00000508584 TCIRG1Q13488 830 aa20.02■□□□□ 0.8
NFKB1-207ENST00000508584 DZIP3Q86Y13 1208 aaKnown RBP20.02■□□□□ 0.8
NFKB1-207ENST00000508584 COL5A3P25940 1745 aaPredicted RBP20.02■□□□□ 0.79
NFKB1-207ENST00000508584 ERVV-1B6SEH8 477 aa20.01■□□□□ 0.79
NFKB1-207ENST00000508584 HSP90AB3PQ58FF7 597 aa20.01■□□□□ 0.79
NFKB1-207ENST00000508584 RC3H1Q5TC82 1133 aaKnown RBP20.01■□□□□ 0.79
NFKB1-207ENST00000508584 GIGYF2Q6Y7W6 1299 aaKnown RBP20.01■□□□□ 0.79
NFKB1-207ENST00000508584 SKAP1Q86WV1 359 aa20.01■□□□□ 0.79
NFKB1-207ENST00000508584 KLHL34Q8N239 644 aa20.01■□□□□ 0.79
NFKB1-207ENST00000508584 ISCA1Q9BUE6 129 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms