RNA–Protein interactions for RNA: ENST00000507197.5

SNHG4-204, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 2 BASIC

Gene SNHG4, Length 865 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-204ENST00000507197 SBF1O95248 1867 aa17.02■□□□□ 0.32
SNHG4-204ENST00000507197 SRGNP10124 158 aa17.02■□□□□ 0.32
SNHG4-204ENST00000507197 DCTN1Q14203 1278 aa17.02■□□□□ 0.32
SNHG4-204ENST00000507197 TPTE2Q6XPS3 522 aa17.02■□□□□ 0.32
SNHG4-204ENST00000507197 CCDC24Q8N4L8 307 aa17.02■□□□□ 0.32
SNHG4-204ENST00000507197 DNAJC5GQ8N7S2 189 aa17.02■□□□□ 0.32
SNHG4-204ENST00000507197 TAOK3Q9H2K8 898 aa17.02■□□□□ 0.32
SNHG4-204ENST00000507197 LTBP3Q9NS15 1303 aa17.01■□□□□ 0.31
SNHG4-204ENST00000507197 PRAMEF22A3QJZ6 481 aa17.01■□□□□ 0.31
SNHG4-204ENST00000507197 PIP4K2AP48426 406 aaPredicted RBP17.01■□□□□ 0.31
SNHG4-204ENST00000507197 ERFEQ4G0M1 354 aa17.01■□□□□ 0.31
SNHG4-204ENST00000507197 ZNF219Q9P2Y4 722 aaPredicted RBP17.01■□□□□ 0.31
SNHG4-204ENST00000507197 PRELPP51888 382 aa17■□□□□ 0.31
SNHG4-204ENST00000507197 PRPF40BQ6NWY9 871 aaKnown RBP17■□□□□ 0.31
SNHG4-204ENST00000507197 NIP7Q9Y221 180 aaKnown RBP eCLIP16.99■□□□□ 0.311e-323■■□□□ 14.4
SNHG4-204ENST00000507197 MAPK8IP3Q9UPT6 1336 aa16.98■□□□□ 0.31
SNHG4-204ENST00000507197 BCORQ6W2J9 1755 aa16.98■□□□□ 0.31
SNHG4-204ENST00000507197 NBPF26B4DH59 902 aa16.98■□□□□ 0.31
SNHG4-204ENST00000507197 NPR1P16066 1061 aa16.98■□□□□ 0.31
SNHG4-204ENST00000507197 NBPF10Q6P3W6 841 aaKnown RBP16.98■□□□□ 0.31
SNHG4-204ENST00000507197 NBPF15Q8N660 670 aa16.98■□□□□ 0.31
SNHG4-204ENST00000507197 KLRG1Q96E93 195 aa16.98■□□□□ 0.31
SNHG4-204ENST00000507197 ANKRD31Q8N7Z5 1873 aa16.98■□□□□ 0.31
SNHG4-204ENST00000507197 WDR90Q96KV7 1748 aa16.97■□□□□ 0.31
SNHG4-204ENST00000507197 GTF2E1P29083 439 aaPredicted RBP16.97■□□□□ 0.31
SNHG4-204ENST00000507197 NFE2L2Q16236 605 aa16.97■□□□□ 0.31
SNHG4-204ENST00000507197 KLRG2A4D1S0 409 aaPredicted RBP16.96■□□□□ 0.31
SNHG4-204ENST00000507197 CCDC93Q567U6 631 aa16.96■□□□□ 0.31
SNHG4-204ENST00000507197 PLEKHF1Q96S99 279 aa16.96■□□□□ 0.31
SNHG4-204ENST00000507197 NYXQ9GZU5 481 aa16.96■□□□□ 0.31
SNHG4-204ENST00000507197 MIS18AQ9NYP9 233 aa16.96■□□□□ 0.31
SNHG4-204ENST00000507197 TIAM2Q8IVF5 1701 aa16.96■□□□□ 0.3
SNHG4-204ENST00000507197 ERVV-1B6SEH8 477 aa16.95■□□□□ 0.3
SNHG4-204ENST00000507197 ALDH1B1P30837 517 aa16.95■□□□□ 0.3
SNHG4-204ENST00000507197 COL11A2P13942 1736 aaPredicted RBP16.95■□□□□ 0.3
SNHG4-204ENST00000507197 EIF4A1P60842 406 aaKnown RBP16.94■□□□□ 0.3
SNHG4-204ENST00000507197 KIF6Q6ZMV9 814 aa16.94■□□□□ 0.3
SNHG4-204ENST00000507197 RTKN2Q8IZC4 609 aa16.94■□□□□ 0.3
SNHG4-204ENST00000507197 JMYQ8N9B5 988 aa16.94■□□□□ 0.3
SNHG4-204ENST00000507197 FER1L6Q2WGJ9 1857 aa16.93■□□□□ 0.3
SNHG4-204ENST00000507197 IQCA1LA6NCM1 817 aa16.92■□□□□ 0.3
SNHG4-204ENST00000507197 FAM177BA6PVY3 158 aa16.92■□□□□ 0.3
SNHG4-204ENST00000507197 POTECB2RU33 542 aa16.92■□□□□ 0.3
SNHG4-204ENST00000507197 HTRA3P83110 453 aa16.92■□□□□ 0.3
SNHG4-204ENST00000507197 FKBP4Q02790 459 aaKnown RBP eCLIP16.92■□□□□ 0.3
SNHG4-204ENST00000507197 RALBP1Q15311 655 aa16.92■□□□□ 0.3
SNHG4-204ENST00000507197 HLFQ16534 295 aa16.92■□□□□ 0.3
SNHG4-204ENST00000507197 NGEFQ8N5V2 710 aa16.92■□□□□ 0.3
SNHG4-204ENST00000507197 C7orf43Q8WVR3 580 aa16.92■□□□□ 0.3
SNHG4-204ENST00000507197 RRP7AQ9Y3A4 280 aaKnown RBP16.92■□□□□ 0.3
SNHG4-204ENST00000507197 ERBB4Q15303 1308 aa16.92■□□□□ 0.3
SNHG4-204ENST00000507197 MAP3K15Q6ZN16 1313 aa16.92■□□□□ 0.3
SNHG4-204ENST00000507197 LAMB4A4D0S4 1761 aa16.9■□□□□ 0.3
SNHG4-204ENST00000507197 ARFGEF2Q9Y6D5 1785 aa16.9■□□□□ 0.3
SNHG4-204ENST00000507197 DDNO94850 711 aaPredicted RBP16.9■□□□□ 0.3
SNHG4-204ENST00000507197 LMOD3Q0VAK6 560 aa16.9■□□□□ 0.3
SNHG4-204ENST00000507197 BABAM1Q9NWV8 329 aa16.9■□□□□ 0.3
SNHG4-204ENST00000507197 SLX4Q8IY92 1834 aa16.9■□□□□ 0.3
SNHG4-204ENST00000507197 IBTKQ9P2D0 1353 aaPredicted RBP16.89■□□□□ 0.3
SNHG4-204ENST00000507197 CCDC88AQ3V6T2 1871 aa16.89■□□□□ 0.29
SNHG4-204ENST00000507197 MYL6BP14649 208 aa16.89■□□□□ 0.29
SNHG4-204ENST00000507197 GRIPAP1Q4V328 841 aa16.89■□□□□ 0.29
SNHG4-204ENST00000507197 CC2D2BQ6DHV5 1058 aa16.89■□□□□ 0.29
SNHG4-204ENST00000507197 CHADLQ6NUI6 762 aa16.89■□□□□ 0.29
SNHG4-204ENST00000507197 THUMPD2Q9BTF0 503 aaKnown RBP16.89■□□□□ 0.29
SNHG4-204ENST00000507197 TSPYL4Q9UJ04 414 aa16.89■□□□□ 0.29
SNHG4-204ENST00000507197 DICER1Q9UPY3 1922 aaKnown RBP16.88■□□□□ 0.29
SNHG4-204ENST00000507197 KDM3BQ7LBC6 1761 aa16.88■□□□□ 0.29
SNHG4-204ENST00000507197 RIPK4P57078 832 aa16.88■□□□□ 0.29
SNHG4-204ENST00000507197 CRY2Q49AN0 593 aa16.88■□□□□ 0.29
SNHG4-204ENST00000507197 RPGRQ92834 1020 aaKnown RBP16.88■□□□□ 0.29
SNHG4-204ENST00000507197 L3MBTL3Q96JM7 780 aaPredicted RBP16.88■□□□□ 0.29
SNHG4-204ENST00000507197 TTLL7Q6ZT98 887 aa16.87■□□□□ 0.29
SNHG4-204ENST00000507197 PPP1R42Q7Z4L9 355 aa16.87■□□□□ 0.29
SNHG4-204ENST00000507197 ZBTB3Q9H5J0 574 aa16.87■□□□□ 0.29
SNHG4-204ENST00000507197 RIC1Q4ADV7 1423 aa16.87■□□□□ 0.29
SNHG4-204ENST00000507197 PARP10Q53GL7 1025 aa16.86■□□□□ 0.29
SNHG4-204ENST00000507197 GIGYF2Q6Y7W6 1299 aaKnown RBP16.86■□□□□ 0.29
SNHG4-204ENST00000507197 NUTM1Q86Y26 1132 aa16.86■□□□□ 0.29
SNHG4-204ENST00000507197 JDP2Q8WYK2 163 aa16.86■□□□□ 0.29
SNHG4-204ENST00000507197 PSMD1Q99460 953 aa16.86■□□□□ 0.29
SNHG4-204ENST00000507197 ZNF277Q9NRM2 450 aaPredicted RBP16.86■□□□□ 0.29
SNHG4-204ENST00000507197 IARSP41252 1262 aaKnown RBP16.85■□□□□ 0.29
SNHG4-204ENST00000507197 LDHDQ86WU2 507 aa16.85■□□□□ 0.29
SNHG4-204ENST00000507197 ZNF34Q8IZ26 560 aa16.85■□□□□ 0.29
SNHG4-204ENST00000507197 SYNE4Q8N205 404 aa16.85■□□□□ 0.29
SNHG4-204ENST00000507197 RBM17Q96I25 401 aaKnown RBP16.85■□□□□ 0.29
SNHG4-204ENST00000507197 TMX4Q9H1E5 349 aaPredicted RBP16.85■□□□□ 0.29
SNHG4-204ENST00000507197 DLG5Q8TDM6 1919 aa16.85■□□□□ 0.29
SNHG4-204ENST00000507197 GPTP24298 496 aa16.84■□□□□ 0.29
SNHG4-204ENST00000507197 HOXA10P31260 410 aaPredicted RBP16.84■□□□□ 0.29
SNHG4-204ENST00000507197 CREBZFQ9NS37 354 aa16.84■□□□□ 0.29
SNHG4-204ENST00000507197 HACL1Q9UJ83 578 aa16.84■□□□□ 0.29
SNHG4-204ENST00000507197 ABCC12Q96J65 1359 aa16.84■□□□□ 0.29
SNHG4-204ENST00000507197 CACNA1SQ13698 1873 aa16.84■□□□□ 0.29
SNHG4-204ENST00000507197 FZD9O00144 591 aa16.83■□□□□ 0.28
SNHG4-204ENST00000507197 EIF2S2P20042 333 aaKnown RBP16.83■□□□□ 0.28
SNHG4-204ENST00000507197 TMPOP42166 694 aaKnown RBP16.83■□□□□ 0.28
SNHG4-204ENST00000507197 SUSD4Q5VX71 490 aa16.83■□□□□ 0.28
SNHG4-204ENST00000507197 UBN2Q6ZU65 1347 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms