RNA–Protein interactions for RNA: ENST00000505397.1

LIN54-204, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIN54, Length 2,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-204ENST00000505397 LARP1Q6PKG0 1096 aaKnown RBP20.6■□□□□ 0.89
LIN54-204ENST00000505397 SSH3Q8TE77 659 aa20.6■□□□□ 0.89
LIN54-204ENST00000505397 TRIM44Q96DX7 344 aaPredicted RBP20.6■□□□□ 0.89
LIN54-204ENST00000505397 EPB41L2O43491 1005 aaKnown RBP20.6■□□□□ 0.89
LIN54-204ENST00000505397 CABP4P57796 275 aa20.6■□□□□ 0.89
LIN54-204ENST00000505397 PALD1Q9ULE6 856 aa20.59■□□□□ 0.89
LIN54-204ENST00000505397 COL14A1Q05707 1796 aaKnown RBP20.59■□□□□ 0.89
LIN54-204ENST00000505397 ANXA1P04083 346 aa20.58■□□□□ 0.89
LIN54-204ENST00000505397 MCCP23508 829 aa20.58■□□□□ 0.89
LIN54-204ENST00000505397 CAVIN1Q6NZI2 390 aaKnown RBP20.58■□□□□ 0.89
LIN54-204ENST00000505397 GPT2Q8TD30 523 aa20.58■□□□□ 0.89
LIN54-204ENST00000505397 COL22A1Q8NFW1 1626 aaPredicted RBP20.58■□□□□ 0.89
LIN54-204ENST00000505397 C5P01031 1676 aa20.58■□□□□ 0.88
LIN54-204ENST00000505397 DNAAF4Q8WXU2 420 aa20.57■□□□□ 0.88
LIN54-204ENST00000505397 INTS4Q96HW7 963 aaKnown RBP20.57■□□□□ 0.88
LIN54-204ENST00000505397 PRAMEF22A3QJZ6 481 aa20.57■□□□□ 0.88
LIN54-204ENST00000505397 PRPF40AO75400 957 aaKnown RBP20.57■□□□□ 0.88
LIN54-204ENST00000505397 BTG4Q9NY30 223 aa20.57■□□□□ 0.88
LIN54-204ENST00000505397 PI4KAP2A4QPH2 592 aa20.56■□□□□ 0.88
LIN54-204ENST00000505397 UBTFL1P0CB47 393 aaPredicted RBP20.56■□□□□ 0.88
LIN54-204ENST00000505397 POLA2Q14181 598 aa20.56■□□□□ 0.88
LIN54-204ENST00000505397 UNC5CLQ8IV45 518 aa20.56■□□□□ 0.88
LIN54-204ENST00000505397 PI4KAP1Q8N8J0 262 aa20.56■□□□□ 0.88
LIN54-204ENST00000505397 HYPKQ9NX55 129 aa20.56■□□□□ 0.88
LIN54-204ENST00000505397 BRD1O95696 1058 aa20.56■□□□□ 0.88
LIN54-204ENST00000505397 RAB11FIP3O75154 756 aa20.55■□□□□ 0.88
LIN54-204ENST00000505397 RILPL2Q969X0 211 aa20.55■□□□□ 0.88
LIN54-204ENST00000505397 TRIM6-TRIM34B2RNG4 842 aa20.55■□□□□ 0.88
LIN54-204ENST00000505397 PHLPP1O60346 1717 aa20.55■□□□□ 0.88
LIN54-204ENST00000505397 SHANK3Q9BYB0 1731 aa20.55■□□□□ 0.88
LIN54-204ENST00000505397 FMNL2Q96PY5 1086 aa20.55■□□□□ 0.88
LIN54-204ENST00000505397 ANO2Q9NQ90 1003 aa20.55■□□□□ 0.88
LIN54-204ENST00000505397 ZNF496Q96IT1 587 aaPredicted RBP20.54■□□□□ 0.88
LIN54-204ENST00000505397 DDX21Q9NR30 783 aaKnown RBP eCLIP20.54■□□□□ 0.88
LIN54-204ENST00000505397 NCLP19338 710 aaKnown RBP20.53■□□□□ 0.88
LIN54-204ENST00000505397 PROSER3Q2NL68 480 aa20.53■□□□□ 0.88
LIN54-204ENST00000505397 DDX54Q8TDD1 881 aaKnown RBP20.53■□□□□ 0.88
LIN54-204ENST00000505397 DDX58O95786 925 aaKnown RBP20.53■□□□□ 0.88
LIN54-204ENST00000505397 SNRPA1P09661 255 aaKnown RBP20.53■□□□□ 0.88
LIN54-204ENST00000505397 ADCY9O60503 1353 aa20.53■□□□□ 0.88
LIN54-204ENST00000505397 PPP1R42Q7Z4L9 355 aa20.52■□□□□ 0.87
LIN54-204ENST00000505397 PI4K2BQ8TCG2 481 aa20.52■□□□□ 0.87
LIN54-204ENST00000505397 ANP32BQ92688 251 aaKnown RBP20.52■□□□□ 0.87
LIN54-204ENST00000505397 RBSNQ9H1K0 784 aa20.52■□□□□ 0.87
LIN54-204ENST00000505397 IL25Q9H293 177 aa20.52■□□□□ 0.87
LIN54-204ENST00000505397 COL16A1Q07092 1604 aaPredicted RBP20.51■□□□□ 0.87
LIN54-204ENST00000505397 ERVV-2B6SEH9 535 aa20.51■□□□□ 0.87
LIN54-204ENST00000505397 HSPA4P34932 840 aa20.51■□□□□ 0.87
LIN54-204ENST00000505397 BEND3Q5T5X7 828 aa20.51■□□□□ 0.87
LIN54-204ENST00000505397 PRIM1P49642 420 aaKnown RBP20.51■□□□□ 0.87
LIN54-204ENST00000505397 KSR2Q6VAB6 950 aa20.51■□□□□ 0.87
LIN54-204ENST00000505397 MAP3K2Q9Y2U5 619 aa20.51■□□□□ 0.87
LIN54-204ENST00000505397 LAMB4A4D0S4 1761 aa20.5■□□□□ 0.87
LIN54-204ENST00000505397 CHAMP1Q96JM3 812 aa20.5■□□□□ 0.87
LIN54-204ENST00000505397 PDLIM2Q96JY6 352 aa20.5■□□□□ 0.87
LIN54-204ENST00000505397 NAP1L5Q96NT1 182 aaPredicted RBP20.5■□□□□ 0.87
LIN54-204ENST00000505397 IL1RAPL2Q9NP60 686 aa20.5■□□□□ 0.87
LIN54-204ENST00000505397 TMEM63CQ9P1W3 806 aa20.5■□□□□ 0.87
LIN54-204ENST00000505397 NKX1-1Q15270 411 aaPredicted RBP20.5■□□□□ 0.87
LIN54-204ENST00000505397 RHPN1Q8TCX5 695 aa20.5■□□□□ 0.87
LIN54-204ENST00000505397 RBM27Q9P2N5 1060 aaKnown RBP20.5■□□□□ 0.87
LIN54-204ENST00000505397 NSFL1CQ9UNZ2 370 aaKnown RBP20.49■□□□□ 0.87
LIN54-204ENST00000505397 HS1BP3Q53T59 392 aa20.49■□□□□ 0.87
LIN54-204ENST00000505397 ZSCAN30Q86W11 494 aa20.49■□□□□ 0.87
LIN54-204ENST00000505397 SURF6O75683 361 aaKnown RBP20.48■□□□□ 0.87
LIN54-204ENST00000505397 MBD3O95983 291 aa20.48■□□□□ 0.87
LIN54-204ENST00000505397 AIMP1Q12904 312 aaKnown RBP20.48■□□□□ 0.87
LIN54-204ENST00000505397 LRSAM1Q6UWE0 723 aa20.48■□□□□ 0.87
LIN54-204ENST00000505397 NUTM1Q86Y26 1132 aa20.48■□□□□ 0.87
LIN54-204ENST00000505397 TOM1O60784 492 aa20.47■□□□□ 0.87
LIN54-204ENST00000505397 MYL6BP14649 208 aa20.47■□□□□ 0.87
LIN54-204ENST00000505397 KIF1BPQ96EK5 621 aa20.47■□□□□ 0.87
LIN54-204ENST00000505397 USP42Q9H9J4 1324 aaKnown RBP20.47■□□□□ 0.87
LIN54-204ENST00000505397 ALDH1L1O75891 902 aa20.47■□□□□ 0.87
LIN54-204ENST00000505397 NBPF7P0C2Y1 421 aaPredicted RBP20.47■□□□□ 0.87
LIN54-204ENST00000505397 PDIA6Q15084 440 aa20.47■□□□□ 0.87
LIN54-204ENST00000505397 UBR2Q8IWV8 1755 aa20.47■□□□□ 0.87
LIN54-204ENST00000505397 SGSM2O43147 1006 aa20.47■□□□□ 0.87
LIN54-204ENST00000505397 RAD50Q92878 1312 aa20.46■□□□□ 0.87
LIN54-204ENST00000505397 PLCH1Q4KWH8 1693 aa20.46■□□□□ 0.87
LIN54-204ENST00000505397 SRGAP3O43295 1099 aa20.46■□□□□ 0.87
LIN54-204ENST00000505397 UPF3BQ9BZI7 483 aaKnown RBP20.46■□□□□ 0.87
LIN54-204ENST00000505397 USP16Q9Y5T5 823 aa20.46■□□□□ 0.87
LIN54-204ENST00000505397 PAPPAQ13219 1627 aa20.46■□□□□ 0.87
LIN54-204ENST00000505397 RIC3Q7Z5B4 369 aa20.45■□□□□ 0.86
LIN54-204ENST00000505397 C9orf78Q9NZ63 289 aaPredicted RBP20.45■□□□□ 0.86
LIN54-204ENST00000505397 PIP4K2BP78356 416 aa20.45■□□□□ 0.86
LIN54-204ENST00000505397 HDAC5Q9UQL6 1122 aa20.45■□□□□ 0.86
LIN54-204ENST00000505397 GLI3P10071 1580 aa20.44■□□□□ 0.86
LIN54-204ENST00000505397 TOGARAM1Q9Y4F4 1720 aa20.44■□□□□ 0.86
LIN54-204ENST00000505397 FOXD4L5Q5VV16 416 aaPredicted RBP20.44■□□□□ 0.86
LIN54-204ENST00000505397 LINS1Q8NG48 757 aa20.44■□□□□ 0.86
LIN54-204ENST00000505397 FOXD4L4Q8WXT5 416 aaPredicted RBP20.44■□□□□ 0.86
LIN54-204ENST00000505397 LSG1Q9H089 658 aaKnown RBP20.44■□□□□ 0.86
LIN54-204ENST00000505397 NEXNQ0ZGT2 675 aa20.43■□□□□ 0.86
LIN54-204ENST00000505397 MTX1Q13505 466 aa20.43■□□□□ 0.86
LIN54-204ENST00000505397 XAGE3Q8WTP9 111 aa20.43■□□□□ 0.86
LIN54-204ENST00000505397 SYCE3A1L190 88 aa20.43■□□□□ 0.86
LIN54-204ENST00000505397 ADAMTS2O95450 1211 aa20.43■□□□□ 0.86
LIN54-204ENST00000505397 HSP90AB4PQ58FF6 505 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms