RNA–Protein interactions for RNA: ENST00000504781.5

DDX41-203, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-203ENST00000504781 GCC1Q96CN9 775 aa12.73□□□□□ -0.37
DDX41-203ENST00000504781 USP44Q9H0E7 712 aa12.73□□□□□ -0.37
DDX41-203ENST00000504781 MAP3K2Q9Y2U5 619 aa12.73□□□□□ -0.37
DDX41-203ENST00000504781 PAPPAQ13219 1627 aa12.73□□□□□ -0.37
DDX41-203ENST00000504781 KCPQ6ZWJ8 1503 aa12.72□□□□□ -0.37
DDX41-203ENST00000504781 TOGARAM1Q9Y4F4 1720 aa12.72□□□□□ -0.37
DDX41-203ENST00000504781 DCAF8L1A6NGE4 600 aa12.72□□□□□ -0.37
DDX41-203ENST00000504781 ANXA1P04083 346 aa12.72□□□□□ -0.37
DDX41-203ENST00000504781 A1BGP04217 495 aa12.72□□□□□ -0.37
DDX41-203ENST00000504781 GNAI2P04899 355 aa12.72□□□□□ -0.37
DDX41-203ENST00000504781 NEXNQ0ZGT2 675 aa12.72□□□□□ -0.37
DDX41-203ENST00000504781 XAGE3Q8WTP9 111 aa12.72□□□□□ -0.37
DDX41-203ENST00000504781 METTL22Q9BUU2 404 aaPredicted RBP12.72□□□□□ -0.37
DDX41-203ENST00000504781 ATP10DQ9P241 1426 aa12.71□□□□□ -0.37
DDX41-203ENST00000504781 NBPF26B4DH59 902 aa12.71□□□□□ -0.37
DDX41-203ENST00000504781 CYP19A1P11511 503 aaPredicted RBP12.71□□□□□ -0.37
DDX41-203ENST00000504781 HMGB2P26583 209 aaKnown RBP12.71□□□□□ -0.37
DDX41-203ENST00000504781 AIMP1Q12904 312 aaKnown RBP12.71□□□□□ -0.37
DDX41-203ENST00000504781 NBPF10Q6P3W6 841 aaKnown RBP12.71□□□□□ -0.37
DDX41-203ENST00000504781 SMC5Q8IY18 1101 aa12.71□□□□□ -0.37
DDX41-203ENST00000504781 NBPF15Q8N660 670 aa12.71□□□□□ -0.37
DDX41-203ENST00000504781 ANKRD44Q8N8A2 993 aa12.71□□□□□ -0.37
DDX41-203ENST00000504781 RGPD3A6NKT7 1758 aaPredicted RBP12.71□□□□□ -0.38
DDX41-203ENST00000504781 RGPD4Q7Z3J3 1758 aa12.71□□□□□ -0.38
DDX41-203ENST00000504781 ADCY9O60503 1353 aa12.7□□□□□ -0.38
DDX41-203ENST00000504781 HMMRO75330 724 aa12.7□□□□□ -0.38
DDX41-203ENST00000504781 ATP8B2P98198 1209 aa12.7□□□□□ -0.38
DDX41-203ENST00000504781 DNAJC10Q8IXB1 793 aa12.7□□□□□ -0.38
DDX41-203ENST00000504781 MEIS3Q99687 375 aa12.7□□□□□ -0.38
DDX41-203ENST00000504781 LOC102724428A0A0B4J2F2 783 aa12.69□□□□□ -0.38
DDX41-203ENST00000504781 UBTFL1P0CB47 393 aaPredicted RBP12.69□□□□□ -0.38
DDX41-203ENST00000504781 SIK1P57059 783 aa12.69□□□□□ -0.38
DDX41-203ENST00000504781 SIRT2Q8IXJ6 389 aa12.69□□□□□ -0.38
DDX41-203ENST00000504781 DCTPP1Q9H773 170 aa12.69□□□□□ -0.38
DDX41-203ENST00000504781 C5P01031 1676 aa12.69□□□□□ -0.38
DDX41-203ENST00000504781 UTYO14607 1347 aa12.68□□□□□ -0.38
DDX41-203ENST00000504781 NHSQ6T4R5 1651 aa12.68□□□□□ -0.38
DDX41-203ENST00000504781 ATP6V1AP38606 617 aa12.68□□□□□ -0.38
DDX41-203ENST00000504781 IL6STP40189 918 aaPredicted RBP12.68□□□□□ -0.38
DDX41-203ENST00000504781 SLC4A9Q96Q91 983 aa12.68□□□□□ -0.38
DDX41-203ENST00000504781 C9orf78Q9NZ63 289 aaPredicted RBP12.68□□□□□ -0.38
DDX41-203ENST00000504781 LAMB4A4D0S4 1761 aa12.68□□□□□ -0.38
DDX41-203ENST00000504781 KCNQ4P56696 695 aa12.67□□□□□ -0.38
DDX41-203ENST00000504781 TRIM28Q13263 835 aaKnown RBP12.67□□□□□ -0.38
DDX41-203ENST00000504781 CEP85Q6P2H3 762 aa12.67□□□□□ -0.38
DDX41-203ENST00000504781 NPM2Q86SE8 214 aaKnown RBP12.67□□□□□ -0.38
DDX41-203ENST00000504781 LRRC4BQ9NT99 713 aa12.67□□□□□ -0.38
DDX41-203ENST00000504781 NEURL1BA8MQ27 555 aa12.66□□□□□ -0.38
DDX41-203ENST00000504781 ERVV-1B6SEH8 477 aa12.66□□□□□ -0.38
DDX41-203ENST00000504781 GCKRQ14397 625 aa12.66□□□□□ -0.38
DDX41-203ENST00000504781 ZNF827Q17R98 1081 aa12.66□□□□□ -0.38
DDX41-203ENST00000504781 MTFR1LQ9H019 292 aa12.66□□□□□ -0.38
DDX41-203ENST00000504781 PDZRN3Q9UPQ7 1066 aa12.66□□□□□ -0.38
DDX41-203ENST00000504781 N4BP2Q86UW6 1770 aaPredicted RBP12.66□□□□□ -0.38
DDX41-203ENST00000504781 DOT1LQ8TEK3 1739 aa12.65□□□□□ -0.38
DDX41-203ENST00000504781 BTAF1O14981 1849 aa12.65□□□□□ -0.38
DDX41-203ENST00000504781 ZNF831Q5JPB2 1677 aa12.65□□□□□ -0.38
DDX41-203ENST00000504781 GRM8O00222 908 aa12.65□□□□□ -0.38
DDX41-203ENST00000504781 IGKV5-2P06315 115 aa12.65□□□□□ -0.38
DDX41-203ENST00000504781 YY1P25490 414 aa12.65□□□□□ -0.38
DDX41-203ENST00000504781 PTGER2P43116 358 aa12.65□□□□□ -0.38
DDX41-203ENST00000504781 NUCB1Q02818 461 aa12.65□□□□□ -0.38
DDX41-203ENST00000504781 TCIRG1Q13488 830 aa12.65□□□□□ -0.38
DDX41-203ENST00000504781 RC3H1Q5TC82 1133 aaKnown RBP12.65□□□□□ -0.38
DDX41-203ENST00000504781 INTS5Q6P9B9 1019 aaKnown RBP12.65□□□□□ -0.38
DDX41-203ENST00000504781 CCDC191Q8NCU4 936 aa12.65□□□□□ -0.38
DDX41-203ENST00000504781 MYD88Q99836 296 aa12.65□□□□□ -0.38
DDX41-203ENST00000504781 C1orf115Q9H7X2 142 aa12.65□□□□□ -0.38
DDX41-203ENST00000504781 CCDC87Q9NVE4 849 aa12.65□□□□□ -0.38
DDX41-203ENST00000504781 PALLDQ8WX93 1383 aa12.65□□□□□ -0.38
DDX41-203ENST00000504781 CASZ1Q86V15 1759 aa12.64□□□□□ -0.39
DDX41-203ENST00000504781 NBPF7P0C2Y1 421 aaPredicted RBP12.64□□□□□ -0.39
DDX41-203ENST00000504781 PIP4K2AP48426 406 aaPredicted RBP12.64□□□□□ -0.39
DDX41-203ENST00000504781 EIF5P55010 431 aaKnown RBP12.64□□□□□ -0.39
DDX41-203ENST00000504781 MTX1Q13505 466 aa12.64□□□□□ -0.39
DDX41-203ENST00000504781 HSP90AB3PQ58FF7 597 aa12.64□□□□□ -0.39
DDX41-203ENST00000504781 SLC27A3Q5K4L6 730 aa12.64□□□□□ -0.39
DDX41-203ENST00000504781 KIF6Q6ZMV9 814 aa12.64□□□□□ -0.39
DDX41-203ENST00000504781 TTLL7Q6ZT98 887 aa12.64□□□□□ -0.39
DDX41-203ENST00000504781 TFCP2L1Q9NZI6 479 aa12.64□□□□□ -0.39
DDX41-203ENST00000504781 H7C1W4 665 aa12.63□□□□□ -0.39
DDX41-203ENST00000504781 RGL2O15211 777 aa12.63□□□□□ -0.39
DDX41-203ENST00000504781 CWF19L2Q2TBE0 894 aaKnown RBP12.63□□□□□ -0.39
DDX41-203ENST00000504781 GIGYF2Q6Y7W6 1299 aaKnown RBP12.63□□□□□ -0.39
DDX41-203ENST00000504781 CHD1LQ86WJ1 897 aa12.63□□□□□ -0.39
DDX41-203ENST00000504781 KLHL34Q8N239 644 aa12.63□□□□□ -0.39
DDX41-203ENST00000504781 SSH3Q8TE77 659 aa12.63□□□□□ -0.39
DDX41-203ENST00000504781 FHDC1Q9C0D6 1143 aaPredicted RBP12.63□□□□□ -0.39
DDX41-203ENST00000504781 ZBTB47Q9UFB7 747 aaPredicted RBP12.63□□□□□ -0.39
DDX41-203ENST00000504781 CCNL1Q9UK58 526 aaPredicted RBP12.63□□□□□ -0.39
DDX41-203ENST00000504781 LRRFIP2Q9Y608 721 aaKnown RBP12.63□□□□□ -0.39
DDX41-203ENST00000504781 MAP3K15Q6ZN16 1313 aa12.62□□□□□ -0.39
DDX41-203ENST00000504781 COL15A1P39059 1388 aa12.62□□□□□ -0.39
DDX41-203ENST00000504781 A0A087WZG4 1122 aa12.62□□□□□ -0.39
DDX41-203ENST00000504781 CRKLP46109 303 aaKnown RBP12.62□□□□□ -0.39
DDX41-203ENST00000504781 POLA2Q14181 598 aa12.62□□□□□ -0.39
DDX41-203ENST00000504781 HSP90AB4PQ58FF6 505 aa12.62□□□□□ -0.39
DDX41-203ENST00000504781 ANKRD45Q5TZF3 282 aa12.62□□□□□ -0.39
DDX41-203ENST00000504781 AKT1S1Q96B36 256 aa12.62□□□□□ -0.39
DDX41-203ENST00000504781 ARXQ96QS3 562 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms