RNA–Protein interactions for RNA: ENST00000504669.5

ITGA1-203, Transcript of integrin subunit alpha 1, humanhuman

TSL 1 (best)

Gene ITGA1, Length 6,276 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA1-203ENST00000504669 TACO1Q9BSH4 297 aaKnown RBP11.93□□□□□ -0.5
ITGA1-203ENST00000504669 PAIP2BQ9ULR5 123 aaKnown RBP11.93□□□□□ -0.5
ITGA1-203ENST00000504669 CSB-PGBD3P0DP91 1061 aa11.93□□□□□ -0.5
ITGA1-203ENST00000504669 TTC19Q6DKK2 380 aaPredicted RBP11.93□□□□□ -0.5
ITGA1-203ENST00000504669 DNAI1Q9UI46 699 aa11.93□□□□□ -0.5
ITGA1-203ENST00000504669 ARIH1Q9Y4X5 557 aaPredicted RBP11.93□□□□□ -0.5
ITGA1-203ENST00000504669 A6NNZ2 444 aa11.92□□□□□ -0.5
ITGA1-203ENST00000504669 TUBB8Q3ZCM7 444 aa11.92□□□□□ -0.5
ITGA1-203ENST00000504669 BCL2L13Q9BXK5 485 aa11.92□□□□□ -0.5
ITGA1-203ENST00000504669 TRIML1Q8N9V2 468 aa11.92□□□□□ -0.5
ITGA1-203ENST00000504669 KIAA1524Q8TCG1 905 aa11.92□□□□□ -0.5
ITGA1-203ENST00000504669 LARSQ9P2J5 1176 aaKnown RBP11.92□□□□□ -0.5
ITGA1-203ENST00000504669 SMIM23A6NLE4 172 aa11.92□□□□□ -0.5
ITGA1-203ENST00000504669 HSP90AB4PQ58FF6 505 aa11.92□□□□□ -0.5
ITGA1-203ENST00000504669 GFAPP14136 432 aa11.92□□□□□ -0.5
ITGA1-203ENST00000504669 RASIP1Q5U651 963 aa11.92□□□□□ -0.5
ITGA1-203ENST00000504669 SMG6Q86US8 1419 aaKnown RBP11.92□□□□□ -0.5
ITGA1-203ENST00000504669 DZIP1LQ8IYY4 767 aaKnown RBP11.92□□□□□ -0.5
ITGA1-203ENST00000504669 HOOK3Q86VS8 718 aa11.91□□□□□ -0.5
ITGA1-203ENST00000504669 FAM210AQ96ND0 272 aa11.91□□□□□ -0.5
ITGA1-203ENST00000504669 G3BP2Q9UN86 482 aaKnown RBP11.91□□□□□ -0.5
ITGA1-203ENST00000504669 OPHN1O60890 802 aa11.91□□□□□ -0.5
ITGA1-203ENST00000504669 TRIM21P19474 475 aaKnown RBP11.91□□□□□ -0.5
ITGA1-203ENST00000504669 MAP3K9P80192 1104 aa11.91□□□□□ -0.5
ITGA1-203ENST00000504669 ANKRD24Q8TF21 1146 aa11.91□□□□□ -0.5
ITGA1-203ENST00000504669 PRKRIP1Q9H875 184 aaPredicted RBP11.91□□□□□ -0.5
ITGA1-203ENST00000504669 USO1O60763 962 aaKnown RBP11.91□□□□□ -0.5
ITGA1-203ENST00000504669 PIP4K2BP78356 416 aa11.91□□□□□ -0.5
ITGA1-203ENST00000504669 PRPF38AQ8NAV1 312 aaKnown RBP11.91□□□□□ -0.5
ITGA1-203ENST00000504669 PCYT1AP49585 367 aa11.91□□□□□ -0.5
ITGA1-203ENST00000504669 ELF2Q15723 593 aa11.91□□□□□ -0.5
ITGA1-203ENST00000504669 INTS8Q75QN2 995 aaKnown RBP11.91□□□□□ -0.5
ITGA1-203ENST00000504669 ZNF280CQ8ND82 737 aa11.91□□□□□ -0.5
ITGA1-203ENST00000504669 GSDMBQ8TAX9 411 aa11.91□□□□□ -0.5
ITGA1-203ENST00000504669 SEC62Q99442 399 aaKnown RBP11.91□□□□□ -0.5
ITGA1-203ENST00000504669 TPD52P55327 224 aaPredicted RBP11.91□□□□□ -0.5
ITGA1-203ENST00000504669 RAB3IPQ96QF0 476 aaPredicted RBP11.91□□□□□ -0.5
ITGA1-203ENST00000504669 XAB2Q9HCS7 855 aaKnown RBP11.91□□□□□ -0.5
ITGA1-203ENST00000504669 PFDN4Q9NQP4 134 aa11.91□□□□□ -0.5
ITGA1-203ENST00000504669 SERPINI2O75830 405 aa11.9□□□□□ -0.5
ITGA1-203ENST00000504669 FLCNQ8NFG4 579 aa11.9□□□□□ -0.5
ITGA1-203ENST00000504669 ALS2CR12Q96Q35 445 aa11.9□□□□□ -0.5
ITGA1-203ENST00000504669 AIMP1Q12904 312 aaKnown RBP11.9□□□□□ -0.5
ITGA1-203ENST00000504669 MMS22LQ6ZRQ5 1243 aa11.9□□□□□ -0.5
ITGA1-203ENST00000504669 SEPT8Q92599 483 aa11.9□□□□□ -0.5
ITGA1-203ENST00000504669 A0A1W2PRG0 241 aa11.9□□□□□ -0.5
ITGA1-203ENST00000504669 ME1P48163 572 aa11.9□□□□□ -0.5
ITGA1-203ENST00000504669 THEGQ9P2T0 379 aa11.9□□□□□ -0.5
ITGA1-203ENST00000504669 APBB1IPQ7Z5R6 666 aaPredicted RBP11.9□□□□□ -0.5
ITGA1-203ENST00000504669 PIBF1Q8WXW3 757 aa11.9□□□□□ -0.5
ITGA1-203ENST00000504669 U2AF1L5P0DN76 240 aaPredicted RBP11.9□□□□□ -0.5
ITGA1-203ENST00000504669 U2AF1Q01081 240 aaKnown RBP eCLIP11.9□□□□□ -0.5
ITGA1-203ENST00000504669 CABS1Q96KC9 395 aa11.9□□□□□ -0.5
ITGA1-203ENST00000504669 TTC12Q9H892 705 aaPredicted RBP11.9□□□□□ -0.5
ITGA1-203ENST00000504669 NMIQ13287 307 aaPredicted RBP11.89□□□□□ -0.51
ITGA1-203ENST00000504669 GRIPAP1Q4V328 841 aa11.89□□□□□ -0.51
ITGA1-203ENST00000504669 GOLGA6CA6NDK9 693 aa11.89□□□□□ -0.51
ITGA1-203ENST00000504669 PPP1R12AO14974 1030 aaPredicted RBP11.89□□□□□ -0.51
ITGA1-203ENST00000504669 GOLGA6DP0CG33 693 aa11.89□□□□□ -0.51
ITGA1-203ENST00000504669 ACBD5Q5T8D3 534 aaPredicted RBP11.89□□□□□ -0.51
ITGA1-203ENST00000504669 RAB11FIP4Q86YS3 637 aa11.89□□□□□ -0.51
ITGA1-203ENST00000504669 TBC1D2Q9BYX2 928 aa11.89□□□□□ -0.51
ITGA1-203ENST00000504669 GOLGA6AQ9NYA3 693 aa11.89□□□□□ -0.51
ITGA1-203ENST00000504669 PNMA8AQ86V59 439 aaPredicted RBP11.89□□□□□ -0.51
ITGA1-203ENST00000504669 CCDC170Q8IYT3 715 aa11.89□□□□□ -0.51
ITGA1-203ENST00000504669 SMC1BQ8NDV3 1235 aa11.89□□□□□ -0.51
ITGA1-203ENST00000504669 SMARCC2Q8TAQ2 1214 aa11.89□□□□□ -0.51
ITGA1-203ENST00000504669 ATICP31939 592 aa11.89□□□□□ -0.51
ITGA1-203ENST00000504669 SYT10Q6XYQ8 523 aa11.89□□□□□ -0.51
ITGA1-203ENST00000504669 IQCA1Q86XH1 822 aa11.89□□□□□ -0.51
ITGA1-203ENST00000504669 IWS1Q96ST2 819 aa11.89□□□□□ -0.51
ITGA1-203ENST00000504669 IQCGQ9H095 443 aaKnown RBP11.89□□□□□ -0.51
ITGA1-203ENST00000504669 ZBTB22O15209 634 aa11.89□□□□□ -0.51
ITGA1-203ENST00000504669 KIF5AQ12840 1032 aa11.89□□□□□ -0.51
ITGA1-203ENST00000504669 CXorf38Q8TB03 319 aa11.89□□□□□ -0.51
ITGA1-203ENST00000504669 DRC3Q9H069 523 aa11.89□□□□□ -0.51
ITGA1-203ENST00000504669 SPECC1L-ADORA2AF8WAN1 911 aa11.88□□□□□ -0.51
ITGA1-203ENST00000504669 NBPF7P0C2Y1 421 aaPredicted RBP11.88□□□□□ -0.51
ITGA1-203ENST00000504669 MAGEA9P43362 315 aa11.88□□□□□ -0.51
ITGA1-203ENST00000504669 STX1AQ16623 288 aa11.88□□□□□ -0.51
ITGA1-203ENST00000504669 DCAF11Q8TEB1 546 aa11.88□□□□□ -0.51
ITGA1-203ENST00000504669 STIM1Q13586 685 aa11.88□□□□□ -0.51
ITGA1-203ENST00000504669 PSMD6Q15008 389 aa11.88□□□□□ -0.51
ITGA1-203ENST00000504669 ARFGAP2Q8N6H7 521 aa11.88□□□□□ -0.51
ITGA1-203ENST00000504669 CAVIN2O95810 425 aa11.88□□□□□ -0.51
ITGA1-203ENST00000504669 PPP2R3AQ06190 1150 aa11.88□□□□□ -0.51
ITGA1-203ENST00000504669 TRAF1Q13077 416 aa11.88□□□□□ -0.51
ITGA1-203ENST00000504669 PRPF4BQ13523 1007 aaKnown RBP11.88□□□□□ -0.51
ITGA1-203ENST00000504669 CCDC30Q5VVM6 783 aa11.88□□□□□ -0.51
ITGA1-203ENST00000504669 STAG1Q8WVM7 1258 aa11.88□□□□□ -0.51
ITGA1-203ENST00000504669 ATP2A3Q93084 1043 aa11.88□□□□□ -0.51
ITGA1-203ENST00000504669 YIPF3Q9GZM5 350 aa11.88□□□□□ -0.51
ITGA1-203ENST00000504669 CACNA2D4Q7Z3S7 1137 aa11.87□□□□□ -0.51
ITGA1-203ENST00000504669 RABEP2Q9H5N1 569 aa11.87□□□□□ -0.51
ITGA1-203ENST00000504669 CCNB3Q8WWL7 1395 aa11.87□□□□□ -0.51
ITGA1-203ENST00000504669 TANGO6Q9C0B7 1094 aa11.87□□□□□ -0.51
ITGA1-203ENST00000504669 BASP1P80723 227 aaKnown RBP11.87□□□□□ -0.51
ITGA1-203ENST00000504669 PLEKHH1Q9ULM0 1364 aa11.87□□□□□ -0.51
ITGA1-203ENST00000504669 A0A087WUV0 522 aaPredicted RBP11.87□□□□□ -0.51
ITGA1-203ENST00000504669 A0A0G2JS52 829 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms