RNA–Protein interactions for RNA: ENST00000503399.1

TRIO-205, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-205ENST00000503399 LTBP3Q9NS15 1303 aa17.51■□□□□ 0.39
TRIO-205ENST00000503399 POTEIP0CG38 1075 aa17.51■□□□□ 0.39
TRIO-205ENST00000503399 POTEJP0CG39 1038 aa17.51■□□□□ 0.39
TRIO-205ENST00000503399 PIP4K2AP48426 406 aaPredicted RBP17.51■□□□□ 0.39
TRIO-205ENST00000503399 STYK1Q6J9G0 422 aa17.51■□□□□ 0.39
TRIO-205ENST00000503399 DZIP3Q86Y13 1208 aaKnown RBP17.51■□□□□ 0.39
TRIO-205ENST00000503399 BCORQ6W2J9 1755 aa17.51■□□□□ 0.39
TRIO-205ENST00000503399 BTBD11A6QL63 1104 aa17.5■□□□□ 0.39
TRIO-205ENST00000503399 PER1O15534 1290 aaPredicted RBP17.5■□□□□ 0.39
TRIO-205ENST00000503399 KCNQ3O43525 872 aa17.5■□□□□ 0.39
TRIO-205ENST00000503399 SRGNP10124 158 aa17.5■□□□□ 0.39
TRIO-205ENST00000503399 SOGA3Q5TF21 947 aa17.5■□□□□ 0.39
TRIO-205ENST00000503399 MASTLQ96GX5 879 aa17.5■□□□□ 0.39
TRIO-205ENST00000503399 CREBZFQ9NS37 354 aa17.5■□□□□ 0.39
TRIO-205ENST00000503399 NBPF5PQ86XG9 351 aaPredicted RBP17.49■□□□□ 0.39
TRIO-205ENST00000503399 ARFGEF2Q9Y6D5 1785 aa17.48■□□□□ 0.39
TRIO-205ENST00000503399 IQCA1LA6NCM1 817 aa17.47■□□□□ 0.39
TRIO-205ENST00000503399 PRKAR2BP31323 418 aa17.47■□□□□ 0.39
TRIO-205ENST00000503399 USP16Q9Y5T5 823 aa17.47■□□□□ 0.39
TRIO-205ENST00000503399 CEMIPQ8WUJ3 1361 aa17.47■□□□□ 0.39
TRIO-205ENST00000503399 CCDC93Q567U6 631 aa17.46■□□□□ 0.39
TRIO-205ENST00000503399 ZNF652Q9Y2D9 606 aa17.46■□□□□ 0.39
TRIO-205ENST00000503399 PRAMEF22A3QJZ6 481 aa17.45■□□□□ 0.38
TRIO-205ENST00000503399 EAPPQ56P03 285 aaPredicted RBP17.45■□□□□ 0.38
TRIO-205ENST00000503399 LDHDQ86WU2 507 aa17.45■□□□□ 0.38
TRIO-205ENST00000503399 PHACTR3Q96KR7 559 aa17.45■□□□□ 0.38
TRIO-205ENST00000503399 CNTNAP1P78357 1384 aa17.44■□□□□ 0.38
TRIO-205ENST00000503399 FAM177BA6PVY3 158 aa17.44■□□□□ 0.38
TRIO-205ENST00000503399 NPR1P16066 1061 aa17.44■□□□□ 0.38
TRIO-205ENST00000503399 TAF1DQ9H5J8 278 aaPredicted RBP17.44■□□□□ 0.38
TRIO-205ENST00000503399 SCN4AP35499 1836 aa17.43■□□□□ 0.38
TRIO-205ENST00000503399 RTF1Q92541 710 aaKnown RBP17.43■□□□□ 0.38
TRIO-205ENST00000503399 CFAP53Q96M91 514 aa17.43■□□□□ 0.38
TRIO-205ENST00000503399 RSPH6AQ9H0K4 717 aa17.43■□□□□ 0.38
TRIO-205ENST00000503399 ZNF277Q9NRM2 450 aaPredicted RBP17.43■□□□□ 0.38
TRIO-205ENST00000503399 NIP7Q9Y221 180 aaKnown RBP eCLIP17.43■□□□□ 0.38
TRIO-205ENST00000503399 ZNF541Q9H0D2 1346 aa17.43■□□□□ 0.38
TRIO-205ENST00000503399 NPC1L1Q9UHC9 1359 aa17.42■□□□□ 0.38
TRIO-205ENST00000503399 FOXN1O15353 648 aa17.42■□□□□ 0.38
TRIO-205ENST00000503399 SNRPA1P09661 255 aaKnown RBP17.42■□□□□ 0.38
TRIO-205ENST00000503399 FKBP4Q02790 459 aaKnown RBP eCLIP17.42■□□□□ 0.38
TRIO-205ENST00000503399 OLFM4Q6UX06 510 aa17.42■□□□□ 0.38
TRIO-205ENST00000503399 CLEC4GQ6UXB4 293 aa17.42■□□□□ 0.38
TRIO-205ENST00000503399 MCM10Q7L590 875 aa17.42■□□□□ 0.38
TRIO-205ENST00000503399 L3MBTL3Q96JM7 780 aaPredicted RBP17.42■□□□□ 0.38
TRIO-205ENST00000503399 CLEC11AQ9Y240 323 aa17.42■□□□□ 0.38
TRIO-205ENST00000503399 PASKQ96RG2 1323 aa17.42■□□□□ 0.38
TRIO-205ENST00000503399 TPTE2Q6XPS3 522 aa17.41■□□□□ 0.38
TRIO-205ENST00000503399 C7orf43Q8WVR3 580 aa17.41■□□□□ 0.38
TRIO-205ENST00000503399 AIDAQ96BJ3 306 aa17.41■□□□□ 0.38
TRIO-205ENST00000503399 HACL1Q9UJ83 578 aa17.41■□□□□ 0.38
TRIO-205ENST00000503399 TMEM88BA6NKF7 163 aa17.4■□□□□ 0.38
TRIO-205ENST00000503399 GTF2E1P29083 439 aaPredicted RBP17.4■□□□□ 0.38
TRIO-205ENST00000503399 U2AF1L5P0DN76 240 aaPredicted RBP17.39■□□□□ 0.37
TRIO-205ENST00000503399 VEGFBP49765 207 aa17.39■□□□□ 0.37
TRIO-205ENST00000503399 U2AF1Q01081 240 aaKnown RBP eCLIP17.39■□□□□ 0.37
TRIO-205ENST00000503399 RTKN2Q8IZC4 609 aa17.39■□□□□ 0.37
TRIO-205ENST00000503399 NUDCQ9Y266 331 aa17.39■□□□□ 0.37
TRIO-205ENST00000503399 RNF123Q5XPI4 1314 aa17.39■□□□□ 0.37
TRIO-205ENST00000503399 EPHX2P34913 555 aa17.38■□□□□ 0.37
TRIO-205ENST00000503399 DCTN1Q14203 1278 aa17.38■□□□□ 0.37
TRIO-205ENST00000503399 KLRG2A4D1S0 409 aaPredicted RBP17.37■□□□□ 0.37
TRIO-205ENST00000503399 NBPF26B4DH59 902 aa17.37■□□□□ 0.37
TRIO-205ENST00000503399 IARSP41252 1262 aaKnown RBP17.37■□□□□ 0.37
TRIO-205ENST00000503399 CTCFP49711 727 aaPredicted RBP17.37■□□□□ 0.37
TRIO-205ENST00000503399 NBPF10Q6P3W6 841 aaKnown RBP17.37■□□□□ 0.37
TRIO-205ENST00000503399 NBPF15Q8N660 670 aa17.37■□□□□ 0.37
TRIO-205ENST00000503399 ITGBL1O95965 494 aaPredicted RBP17.36■□□□□ 0.37
TRIO-205ENST00000503399 ALDH1B1P30837 517 aa17.36■□□□□ 0.37
TRIO-205ENST00000503399 HLFQ16534 295 aa17.36■□□□□ 0.37
TRIO-205ENST00000503399 MAP1SQ66K74 1059 aaPredicted RBP17.36■□□□□ 0.37
TRIO-205ENST00000503399 SYNE4Q8N205 404 aa17.36■□□□□ 0.37
TRIO-205ENST00000503399 NGEFQ8N5V2 710 aa17.36■□□□□ 0.37
TRIO-205ENST00000503399 PRDM10Q9NQV6 1147 aa17.36■□□□□ 0.37
TRIO-205ENST00000503399 PNMA8AQ86V59 439 aaPredicted RBP17.35■□□□□ 0.37
TRIO-205ENST00000503399 NUTM1Q86Y26 1132 aa17.34■□□□□ 0.37
TRIO-205ENST00000503399 CNTROBQ8N137 903 aa17.34■□□□□ 0.37
TRIO-205ENST00000503399 ADAMTSL1Q8N6G6 1762 aa17.34■□□□□ 0.37
TRIO-205ENST00000503399 JDP2Q8WYK2 163 aa17.34■□□□□ 0.37
TRIO-205ENST00000503399 ABCC12Q96J65 1359 aa17.34■□□□□ 0.37
TRIO-205ENST00000503399 GJA3Q9Y6H8 435 aa17.34■□□□□ 0.37
TRIO-205ENST00000503399 LAMB4A4D0S4 1761 aa17.33■□□□□ 0.37
TRIO-205ENST00000503399 FZD9O00144 591 aa17.33■□□□□ 0.36
TRIO-205ENST00000503399 RGL2O15211 777 aa17.33■□□□□ 0.36
TRIO-205ENST00000503399 LBX1P52954 281 aa17.33■□□□□ 0.36
TRIO-205ENST00000503399 GPC2Q8N158 579 aa17.33■□□□□ 0.36
TRIO-205ENST00000503399 MIS18AQ9NYP9 233 aa17.33■□□□□ 0.36
TRIO-205ENST00000503399 ABT1Q9ULW3 272 aaKnown RBP17.33■□□□□ 0.36
TRIO-205ENST00000503399 TAF7Q15545 349 aaPredicted RBP17.32■□□□□ 0.36
TRIO-205ENST00000503399 DEFB115Q30KQ5 88 aa17.32■□□□□ 0.36
TRIO-205ENST00000503399 NYXQ9GZU5 481 aa17.32■□□□□ 0.36
TRIO-205ENST00000503399 LMOD1P29536 600 aaPredicted RBP17.31■□□□□ 0.36
TRIO-205ENST00000503399 PPP2R1AP30153 589 aa17.31■□□□□ 0.36
TRIO-205ENST00000503399 EIF6P56537 245 aaKnown RBP17.31■□□□□ 0.36
TRIO-205ENST00000503399 RPGRQ92834 1020 aaKnown RBP17.31■□□□□ 0.36
TRIO-205ENST00000503399 PSMD1Q99460 953 aa17.31■□□□□ 0.36
TRIO-205ENST00000503399 WBP1LQ9NX94 342 aa17.31■□□□□ 0.36
TRIO-205ENST00000503399 RASSF10A6NK89 507 aa17.3■□□□□ 0.36
TRIO-205ENST00000503399 HTATSF1O43719 755 aaKnown RBP17.3■□□□□ 0.36
TRIO-205ENST00000503399 GPTP24298 496 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms