RNA–Protein interactions for RNA: ENST00000502870.1

HERC6-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 4

Gene HERC6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-204ENST00000502870 ITGBL1O95965 494 aaPredicted RBP24.45■■□□□ 1.5
HERC6-204ENST00000502870 MAP2K1Q02750 393 aaPredicted RBP24.45■■□□□ 1.5
HERC6-204ENST00000502870 CCDC93Q567U6 631 aa24.45■■□□□ 1.5
HERC6-204ENST00000502870 PNMA8AQ86V59 439 aaPredicted RBP24.45■■□□□ 1.5
HERC6-204ENST00000502870 ABHD8Q96I13 439 aa24.45■■□□□ 1.5
HERC6-204ENST00000502870 HACL1Q9UJ83 578 aa24.45■■□□□ 1.5
HERC6-204ENST00000502870 KNSTRNQ9Y448 316 aa24.45■■□□□ 1.5
HERC6-204ENST00000502870 HMOX1P09601 288 aa24.44■■□□□ 1.5
HERC6-204ENST00000502870 MTHFSDQ2M296 383 aaKnown RBP24.44■■□□□ 1.5
HERC6-204ENST00000502870 HEG1Q9ULI3 1381 aa24.43■■□□□ 1.5
HERC6-204ENST00000502870 RASSF10A6NK89 507 aa24.43■■□□□ 1.5
HERC6-204ENST00000502870 DEFB115Q30KQ5 88 aa24.43■■□□□ 1.5
HERC6-204ENST00000502870 BCORQ6W2J9 1755 aa24.43■■□□□ 1.5
HERC6-204ENST00000502870 ADAMTSL1Q8N6G6 1762 aa24.43■■□□□ 1.5
HERC6-204ENST00000502870 TEFQ10587 303 aa24.42■■□□□ 1.5
HERC6-204ENST00000502870 FAM161AQ3B820 660 aa24.42■■□□□ 1.5
HERC6-204ENST00000502870 HSPA8P11142 646 aaKnown RBP24.41■■□□□ 1.5
HERC6-204ENST00000502870 EPHX2P34913 555 aa24.41■■□□□ 1.5
HERC6-204ENST00000502870 ZNF496Q96IT1 587 aaPredicted RBP24.41■■□□□ 1.5
HERC6-204ENST00000502870 FKBP4Q02790 459 aaKnown RBP eCLIP24.4■■□□□ 1.5
HERC6-204ENST00000502870 ZNF790Q6PG37 636 aa24.4■■□□□ 1.5
HERC6-204ENST00000502870 WDR33Q9C0J8 1336 aaKnown RBP24.39■■□□□ 1.5
HERC6-204ENST00000502870 EIF4G2P78344 907 aaKnown RBP eCLIP24.39■■□□□ 1.49
HERC6-204ENST00000502870 CAMTA2O94983 1202 aa24.38■■□□□ 1.49
HERC6-204ENST00000502870 NPR1P16066 1061 aa24.38■■□□□ 1.49
HERC6-204ENST00000502870 NBPF5PQ86XG9 351 aaPredicted RBP24.38■■□□□ 1.49
HERC6-204ENST00000502870 RTKN2Q8IZC4 609 aa24.38■■□□□ 1.49
HERC6-204ENST00000502870 CNTROBQ8N137 903 aa24.38■■□□□ 1.49
HERC6-204ENST00000502870 FMNL2Q96PY5 1086 aa24.38■■□□□ 1.49
HERC6-204ENST00000502870 BEGAINQ9BUH8 593 aa24.38■■□□□ 1.49
HERC6-204ENST00000502870 ABT1Q9ULW3 272 aaKnown RBP24.38■■□□□ 1.49
HERC6-204ENST00000502870 SIPA1L3O60292 1781 aaPredicted RBP24.38■■□□□ 1.49
HERC6-204ENST00000502870 ZNF541Q9H0D2 1346 aa24.37■■□□□ 1.49
HERC6-204ENST00000502870 C7orf43Q8WVR3 580 aa24.37■■□□□ 1.49
HERC6-204ENST00000502870 MLLT1Q03111 559 aaPredicted RBP24.36■■□□□ 1.49
HERC6-204ENST00000502870 DZIP3Q86Y13 1208 aaKnown RBP24.36■■□□□ 1.49
HERC6-204ENST00000502870 ZNF277Q9NRM2 450 aaPredicted RBP24.36■■□□□ 1.49
HERC6-204ENST00000502870 ZNF652Q9Y2D9 606 aa24.36■■□□□ 1.49
HERC6-204ENST00000502870 DIAPH1O60610 1272 aaKnown RBP24.35■■□□□ 1.49
HERC6-204ENST00000502870 MAP1SQ66K74 1059 aaPredicted RBP24.35■■□□□ 1.49
HERC6-204ENST00000502870 RNF123Q5XPI4 1314 aa24.35■■□□□ 1.49
HERC6-204ENST00000502870 CLEC4GQ6UXB4 293 aa24.34■■□□□ 1.49
HERC6-204ENST00000502870 GPC2Q8N158 579 aa24.34■■□□□ 1.49
HERC6-204ENST00000502870 THSD7BQ9C0I4 1608 aa24.34■■□□□ 1.49
HERC6-204ENST00000502870 GNAT3A8MTJ3 354 aa24.33■■□□□ 1.49
HERC6-204ENST00000502870 A1BGP04217 495 aa24.33■■□□□ 1.49
HERC6-204ENST00000502870 ECE1P42892 770 aa24.33■■□□□ 1.49
HERC6-204ENST00000502870 GAS2L2Q8NHY3 880 aa24.33■■□□□ 1.49
HERC6-204ENST00000502870 PCDH10Q9P2E7 1040 aa24.33■■□□□ 1.49
HERC6-204ENST00000502870 HSPA5P11021 654 aaKnown RBP24.32■■□□□ 1.48
HERC6-204ENST00000502870 IARSP41252 1262 aaKnown RBP24.32■■□□□ 1.48
HERC6-204ENST00000502870 JDP2Q8WYK2 163 aa24.32■■□□□ 1.48
HERC6-204ENST00000502870 CCDC85CA6NKD9 419 aa24.31■■□□□ 1.48
HERC6-204ENST00000502870 FZD9O00144 591 aa24.31■■□□□ 1.48
HERC6-204ENST00000502870 TPTE2Q6XPS3 522 aa24.31■■□□□ 1.48
HERC6-204ENST00000502870 KLRG2A4D1S0 409 aaPredicted RBP24.3■■□□□ 1.48
HERC6-204ENST00000502870 LMOD1P29536 600 aaPredicted RBP24.3■■□□□ 1.48
HERC6-204ENST00000502870 ALDH1B1P30837 517 aa24.3■■□□□ 1.48
HERC6-204ENST00000502870 PAXIP1Q6ZW49 1069 aaPredicted RBP24.3■■□□□ 1.48
HERC6-204ENST00000502870 DDX21Q9NR30 783 aaKnown RBP eCLIP24.3■■□□□ 1.48
HERC6-204ENST00000502870 TRPM7Q96QT4 1865 aa24.3■■□□□ 1.48
HERC6-204ENST00000502870 AMER1Q5JTC6 1135 aaPredicted RBP24.29■■□□□ 1.48
HERC6-204ENST00000502870 IL17REQ8NFR9 667 aa24.29■■□□□ 1.48
HERC6-204ENST00000502870 RGL2O15211 777 aa24.28■■□□□ 1.48
HERC6-204ENST00000502870 RGS19P49795 217 aa24.28■■□□□ 1.48
HERC6-204ENST00000502870 CAPNS2Q96L46 248 aa24.28■■□□□ 1.48
HERC6-204ENST00000502870 EIF6P56537 245 aaKnown RBP24.27■■□□□ 1.48
HERC6-204ENST00000502870 SYNE4Q8N205 404 aa24.27■■□□□ 1.48
HERC6-204ENST00000502870 PSMD1Q99460 953 aa24.26■■□□□ 1.47
HERC6-204ENST00000502870 BTBD11A6QL63 1104 aa24.25■■□□□ 1.47
HERC6-204ENST00000502870 GPR101Q96P66 508 aaPredicted RBP24.25■■□□□ 1.47
HERC6-204ENST00000502870 NIP7Q9Y221 180 aaKnown RBP eCLIP24.25■■□□□ 1.47
HERC6-204ENST00000502870 GTF2E1P29083 439 aaPredicted RBP24.24■■□□□ 1.47
HERC6-204ENST00000502870 CC2D2BQ6DHV5 1058 aa24.24■■□□□ 1.47
HERC6-204ENST00000502870 OLFM4Q6UX06 510 aa24.24■■□□□ 1.47
HERC6-204ENST00000502870 GJA3Q9Y6H8 435 aa24.24■■□□□ 1.47
HERC6-204ENST00000502870 CLSPNQ9HAW4 1339 aa24.24■■□□□ 1.47
HERC6-204ENST00000502870 GRM1Q13255 1194 aa24.23■■□□□ 1.47
HERC6-204ENST00000502870 CEMIPQ8WUJ3 1361 aa24.23■■□□□ 1.47
HERC6-204ENST00000502870 U2SURPO15042 1029 aaKnown RBP24.22■■□□□ 1.47
HERC6-204ENST00000502870 CA12O43570 354 aa24.22■■□□□ 1.47
HERC6-204ENST00000502870 GRIPAP1Q4V328 841 aa24.22■■□□□ 1.47
HERC6-204ENST00000502870 MAP2K2P36507 400 aa24.21■■□□□ 1.47
HERC6-204ENST00000502870 USP16Q9Y5T5 823 aa24.21■■□□□ 1.47
HERC6-204ENST00000502870 SNRPA1P09661 255 aaKnown RBP24.2■■□□□ 1.46
HERC6-204ENST00000502870 CYP4F22Q6NT55 531 aa24.2■■□□□ 1.46
HERC6-204ENST00000502870 USP50Q70EL3 339 aaPredicted RBP24.2■■□□□ 1.46
HERC6-204ENST00000502870 PIP4K2AP48426 406 aaPredicted RBP24.19■■□□□ 1.46
HERC6-204ENST00000502870 TLL2Q9Y6L7 1015 aa24.19■■□□□ 1.46
HERC6-204ENST00000502870 LTBP1Q14766 1721 aa24.18■■□□□ 1.46
HERC6-204ENST00000502870 PDE4DIPQ5VU43 2346 aa24.18■■□□□ 1.46
HERC6-204ENST00000502870 FAM177BA6PVY3 158 aa24.18■■□□□ 1.46
HERC6-204ENST00000502870 KCNQ3O43525 872 aa24.18■■□□□ 1.46
HERC6-204ENST00000502870 CFAP44Q96MT7 982 aa24.18■■□□□ 1.46
HERC6-204ENST00000502870 SNED1Q8TER0 1413 aa24.18■■□□□ 1.46
HERC6-204ENST00000502870 LARGE2Q8N3Y3 721 aa24.17■■□□□ 1.46
HERC6-204ENST00000502870 NYXQ9GZU5 481 aa24.17■■□□□ 1.46
HERC6-204ENST00000502870 COL3A1P02461 1466 aaPredicted RBP24.17■■□□□ 1.46
HERC6-204ENST00000502870 EPS15P42566 896 aa24.16■■□□□ 1.46
HERC6-204ENST00000502870 SCNN1DP51172 638 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms