RNA–Protein interactions for RNA: ENST00000502187.5

LINC01550-202, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 2 BASIC

Gene LINC01550, Length 2,455 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-202ENST00000502187 DDX58O95786 925 aaKnown RBP11.4□□□□□ -0.58
LINC01550-202ENST00000502187 SLC24A3Q9HC58 644 aa11.4□□□□□ -0.58
LINC01550-202ENST00000502187 U3KPZ7 1027 aaPredicted RBP11.4□□□□□ -0.58
LINC01550-202ENST00000502187 SMARCC1Q92922 1105 aaPredicted RBP11.4□□□□□ -0.59
LINC01550-202ENST00000502187 ZBTB40Q9NUA8 1239 aa11.4□□□□□ -0.59
LINC01550-202ENST00000502187 ARFGEF2Q9Y6D5 1785 aa11.39□□□□□ -0.59
LINC01550-202ENST00000502187 PALLDQ8WX93 1383 aa11.39□□□□□ -0.59
LINC01550-202ENST00000502187 EP400Q96L91 3159 aa11.39□□□□□ -0.59
LINC01550-202ENST00000502187 PI4KAP2A4QPH2 592 aa11.39□□□□□ -0.59
LINC01550-202ENST00000502187 ZBTB7BO15156 539 aaPredicted RBP11.39□□□□□ -0.59
LINC01550-202ENST00000502187 AIMP1Q12904 312 aaKnown RBP11.39□□□□□ -0.59
LINC01550-202ENST00000502187 DNAJC10Q8IXB1 793 aa11.39□□□□□ -0.59
LINC01550-202ENST00000502187 PI4KAP1Q8N8J0 262 aa11.39□□□□□ -0.59
LINC01550-202ENST00000502187 DNAAF4Q8WXU2 420 aa11.39□□□□□ -0.59
LINC01550-202ENST00000502187 ADCY9O60503 1353 aa11.39□□□□□ -0.59
LINC01550-202ENST00000502187 STARD3NLO95772 234 aa11.38□□□□□ -0.59
LINC01550-202ENST00000502187 PIP4K2AP48426 406 aaPredicted RBP11.38□□□□□ -0.59
LINC01550-202ENST00000502187 ZNF831Q5JPB2 1677 aa11.38□□□□□ -0.59
LINC01550-202ENST00000502187 ATP10DQ9P241 1426 aa11.38□□□□□ -0.59
LINC01550-202ENST00000502187 KSR2Q6VAB6 950 aa11.38□□□□□ -0.59
LINC01550-202ENST00000502187 XAGE3Q8WTP9 111 aa11.38□□□□□ -0.59
LINC01550-202ENST00000502187 A1BGP04217 495 aa11.37□□□□□ -0.59
LINC01550-202ENST00000502187 CENPQQ7L2Z9 268 aaPredicted RBP11.37□□□□□ -0.59
LINC01550-202ENST00000502187 MAP3K2Q9Y2U5 619 aa11.37□□□□□ -0.59
LINC01550-202ENST00000502187 PCDHB15Q9Y5E8 787 aa11.37□□□□□ -0.59
LINC01550-202ENST00000502187 NUP188Q5SRE5 1749 aa11.37□□□□□ -0.59
LINC01550-202ENST00000502187 AFDNP55196 1824 aaKnown RBP11.37□□□□□ -0.59
LINC01550-202ENST00000502187 COL5A3P25940 1745 aaPredicted RBP11.37□□□□□ -0.59
LINC01550-202ENST00000502187 COPS6Q7L5N1 327 aa11.37□□□□□ -0.59
LINC01550-202ENST00000502187 LRP10Q7Z4F1 713 aa11.37□□□□□ -0.59
LINC01550-202ENST00000502187 SLC4A9Q96Q91 983 aa11.37□□□□□ -0.59
LINC01550-202ENST00000502187 SRCIN1Q9C0H9 1055 aa11.37□□□□□ -0.59
LINC01550-202ENST00000502187 BCL11BQ9C0K0 894 aaPredicted RBP11.37□□□□□ -0.59
LINC01550-202ENST00000502187 NBPF26B4DH59 902 aa11.36□□□□□ -0.59
LINC01550-202ENST00000502187 KCNQ4P56696 695 aa11.36□□□□□ -0.59
LINC01550-202ENST00000502187 NBPF14Q5TI25 921 aa11.36□□□□□ -0.59
LINC01550-202ENST00000502187 NBPF10Q6P3W6 841 aaKnown RBP11.36□□□□□ -0.59
LINC01550-202ENST00000502187 RIC3Q7Z5B4 369 aa11.36□□□□□ -0.59
LINC01550-202ENST00000502187 NBPF15Q8N660 670 aa11.36□□□□□ -0.59
LINC01550-202ENST00000502187 KDM2BQ8NHM5 1336 aa11.36□□□□□ -0.59
LINC01550-202ENST00000502187 LOC102724428A0A0B4J2F2 783 aa11.36□□□□□ -0.59
LINC01550-202ENST00000502187 ATP6V1AP38606 617 aa11.36□□□□□ -0.59
LINC01550-202ENST00000502187 SIK1P57059 783 aa11.36□□□□□ -0.59
LINC01550-202ENST00000502187 RNF25Q96BH1 459 aaPredicted RBP11.36□□□□□ -0.59
LINC01550-202ENST00000502187 LY75O60449 1722 aa11.36□□□□□ -0.59
LINC01550-202ENST00000502187 MEIS3Q99687 375 aa11.35□□□□□ -0.59
LINC01550-202ENST00000502187 RWDD1Q9H446 243 aaPredicted RBP11.35□□□□□ -0.59
LINC01550-202ENST00000502187 RREB1Q92766 1687 aa11.35□□□□□ -0.59
LINC01550-202ENST00000502187 CYP19A1P11511 503 aaPredicted RBP11.35□□□□□ -0.59
LINC01550-202ENST00000502187 BEND3Q5T5X7 828 aa11.35□□□□□ -0.59
LINC01550-202ENST00000502187 ANKRD13DQ6ZTN6 518 aa11.35□□□□□ -0.59
LINC01550-202ENST00000502187 GNAI3P08754 354 aa11.34□□□□□ -0.59
LINC01550-202ENST00000502187 NEXNQ0ZGT2 675 aa11.34□□□□□ -0.59
LINC01550-202ENST00000502187 ZC3H15Q8WU90 426 aaKnown RBP11.34□□□□□ -0.59
LINC01550-202ENST00000502187 ZNF330Q9Y3S2 320 aaPredicted RBP11.34□□□□□ -0.59
LINC01550-202ENST00000502187 MYH14Q7Z406 1995 aaKnown RBP11.34□□□□□ -0.59
LINC01550-202ENST00000502187 ALDH1L1O75891 902 aa11.34□□□□□ -0.59
LINC01550-202ENST00000502187 IGHDP01880 384 aa11.34□□□□□ -0.59
LINC01550-202ENST00000502187 APBA3O96018 575 aa11.33□□□□□ -0.6
LINC01550-202ENST00000502187 PLBD2Q8NHP8 589 aa11.33□□□□□ -0.6
LINC01550-202ENST00000502187 KCNV2Q8TDN2 545 aa11.33□□□□□ -0.6
LINC01550-202ENST00000502187 ZBTB1Q9Y2K1 713 aa11.33□□□□□ -0.6
LINC01550-202ENST00000502187 TAF1LQ8IZX4 1826 aa11.33□□□□□ -0.6
LINC01550-202ENST00000502187 MSH5O43196 834 aa11.33□□□□□ -0.6
LINC01550-202ENST00000502187 HDAC1Q13547 482 aaPredicted RBP11.33□□□□□ -0.6
LINC01550-202ENST00000502187 LINS1Q8NG48 757 aa11.33□□□□□ -0.6
LINC01550-202ENST00000502187 METTL22Q9BUU2 404 aaPredicted RBP11.33□□□□□ -0.6
LINC01550-202ENST00000502187 GNAI2P04899 355 aa11.32□□□□□ -0.6
LINC01550-202ENST00000502187 UBTFL1P0CB47 393 aaPredicted RBP11.32□□□□□ -0.6
LINC01550-202ENST00000502187 ITPK1Q13572 414 aa11.32□□□□□ -0.6
LINC01550-202ENST00000502187 TTLL7Q6ZT98 887 aa11.32□□□□□ -0.6
LINC01550-202ENST00000502187 MYD88Q99836 296 aa11.32□□□□□ -0.6
LINC01550-202ENST00000502187 ANKRD36CQ5JPF3 1778 aa11.32□□□□□ -0.6
LINC01550-202ENST00000502187 KIF6Q6ZMV9 814 aa11.32□□□□□ -0.6
LINC01550-202ENST00000502187 USP44Q9H0E7 712 aa11.32□□□□□ -0.6
LINC01550-202ENST00000502187 CCDC87Q9NVE4 849 aa11.32□□□□□ -0.6
LINC01550-202ENST00000502187 CCNL1Q9UK58 526 aaPredicted RBP11.32□□□□□ -0.6
LINC01550-202ENST00000502187 IL6STP40189 918 aaPredicted RBP11.31□□□□□ -0.6
LINC01550-202ENST00000502187 CWF19L2Q2TBE0 894 aaKnown RBP11.31□□□□□ -0.6
LINC01550-202ENST00000502187 NUP98P52948 1817 aa11.31□□□□□ -0.6
LINC01550-202ENST00000502187 CRKLP46109 303 aaKnown RBP11.31□□□□□ -0.6
LINC01550-202ENST00000502187 RPAP2Q8IXW5 612 aaPredicted RBP11.31□□□□□ -0.6
LINC01550-202ENST00000502187 PLCD3Q8N3E9 789 aa11.31□□□□□ -0.6
LINC01550-202ENST00000502187 ZBTB3Q9H5J0 574 aa11.31□□□□□ -0.6
LINC01550-202ENST00000502187 C9orf78Q9NZ63 289 aaPredicted RBP11.31□□□□□ -0.6
LINC01550-202ENST00000502187 IBTKQ9P2D0 1353 aaPredicted RBP11.31□□□□□ -0.6
LINC01550-202ENST00000502187 CEP85Q6P2H3 762 aa11.3□□□□□ -0.6
LINC01550-202ENST00000502187 ANKRD44Q8N8A2 993 aa11.3□□□□□ -0.6
LINC01550-202ENST00000502187 NEURL1BA8MQ27 555 aa11.3□□□□□ -0.6
LINC01550-202ENST00000502187 IGKV5-2P06315 115 aa11.3□□□□□ -0.6
LINC01550-202ENST00000502187 PDIA4P13667 645 aaKnown RBP11.3□□□□□ -0.6
LINC01550-202ENST00000502187 LRRFIP2Q9Y608 721 aaKnown RBP11.3□□□□□ -0.6
LINC01550-202ENST00000502187 INTS5Q6P9B9 1019 aaKnown RBP11.29□□□□□ -0.6
LINC01550-202ENST00000502187 HDAC5Q9UQL6 1122 aa11.29□□□□□ -0.6
LINC01550-202ENST00000502187 MAP3K15Q6ZN16 1313 aa11.29□□□□□ -0.6
LINC01550-202ENST00000502187 GRM8O00222 908 aa11.29□□□□□ -0.6
LINC01550-202ENST00000502187 HMMRO75330 724 aa11.29□□□□□ -0.6
LINC01550-202ENST00000502187 NBPF7P0C2Y1 421 aaPredicted RBP11.29□□□□□ -0.6
LINC01550-202ENST00000502187 SIRT2Q8IXJ6 389 aa11.29□□□□□ -0.6
LINC01550-202ENST00000502187 LINC00116Q8NCU8 138 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms