RNA–Protein interactions for RNA: ENST00000501400.1

LINC00535-201, long intergenic non-protein coding RNA 535, humanhuman

TSL 1 (best) BASIC

Gene LINC00535, Length 1,914 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-201ENST00000501400 TBC1D9Q6ZT07 1266 aa22.58■■□□□ 1.21
LINC00535-201ENST00000501400 OSBPL3Q9H4L5 887 aa22.58■■□□□ 1.21
LINC00535-201ENST00000501400 TJP1Q07157 1748 aa22.58■■□□□ 1.2
LINC00535-201ENST00000501400 GCKRQ14397 625 aa22.57■■□□□ 1.2
LINC00535-201ENST00000501400 PDE1AP54750 535 aa22.57■■□□□ 1.2
LINC00535-201ENST00000501400 PLBD2Q8NHP8 589 aa22.57■■□□□ 1.2
LINC00535-201ENST00000501400 CDCA7Q9BWT1 371 aaPredicted RBP22.57■■□□□ 1.2
LINC00535-201ENST00000501400 ERICH6Q7L0X2 663 aa22.56■■□□□ 1.2
LINC00535-201ENST00000501400 SURF6O75683 361 aaKnown RBP22.55■■□□□ 1.2
LINC00535-201ENST00000501400 TTLL7Q6ZT98 887 aa22.55■■□□□ 1.2
LINC00535-201ENST00000501400 KAT6BQ8WYB5 2073 aa22.55■■□□□ 1.2
LINC00535-201ENST00000501400 CDC45O75419 566 aa22.55■■□□□ 1.2
LINC00535-201ENST00000501400 JCADQ9P266 1359 aa22.54■■□□□ 1.2
LINC00535-201ENST00000501400 RAB11FIP3O75154 756 aa22.54■■□□□ 1.2
LINC00535-201ENST00000501400 VSIG10Q8N0Z9 540 aa22.54■■□□□ 1.2
LINC00535-201ENST00000501400 BICC1Q9H694 974 aaKnown RBP22.54■■□□□ 1.2
LINC00535-201ENST00000501400 SDSP20132 328 aa22.53■■□□□ 1.2
LINC00535-201ENST00000501400 AEBP2Q6ZN18 517 aaPredicted RBP22.53■■□□□ 1.2
LINC00535-201ENST00000501400 HDAC5Q9UQL6 1122 aa22.53■■□□□ 1.2
LINC00535-201ENST00000501400 DNAJC10Q8IXB1 793 aa22.53■■□□□ 1.2
LINC00535-201ENST00000501400 C22orf23Q9BZE7 217 aa22.53■■□□□ 1.2
LINC00535-201ENST00000501400 MX1P20591 662 aa22.52■■□□□ 1.2
LINC00535-201ENST00000501400 DDB1Q16531 1140 aa22.52■■□□□ 1.2
LINC00535-201ENST00000501400 TSHZ3Q63HK5 1081 aa22.52■■□□□ 1.2
LINC00535-201ENST00000501400 RHPN1Q8TCX5 695 aa22.52■■□□□ 1.2
LINC00535-201ENST00000501400 SLC4A9Q96Q91 983 aa22.52■■□□□ 1.2
LINC00535-201ENST00000501400 IL1RAPL2Q9NP60 686 aa22.52■■□□□ 1.2
LINC00535-201ENST00000501400 BARGINQ6ZT62 677 aa22.51■■□□□ 1.19
LINC00535-201ENST00000501400 BCL9LQ86UU0 1499 aa22.51■■□□□ 1.19
LINC00535-201ENST00000501400 COL15A1P39059 1388 aa22.51■■□□□ 1.19
LINC00535-201ENST00000501400 ATP5J2-PTCD1G3V325 749 aa22.51■■□□□ 1.19
LINC00535-201ENST00000501400 SLC4A3P48751 1232 aa22.51■■□□□ 1.19
LINC00535-201ENST00000501400 EPHA10Q5JZY3 1008 aa22.51■■□□□ 1.19
LINC00535-201ENST00000501400 KIF1BPQ96EK5 621 aa22.51■■□□□ 1.19
LINC00535-201ENST00000501400 STAP2Q9UGK3 403 aa22.51■■□□□ 1.19
LINC00535-201ENST00000501400 PA2G4Q9UQ80 394 aaKnown RBP22.49■■□□□ 1.19
LINC00535-201ENST00000501400 PRIM1P49642 420 aaKnown RBP22.49■■□□□ 1.19
LINC00535-201ENST00000501400 CASP7P55210 303 aa22.49■■□□□ 1.19
LINC00535-201ENST00000501400 MARCH10Q8NA82 808 aaPredicted RBP22.49■■□□□ 1.19
LINC00535-201ENST00000501400 RBM42Q9BTD8 480 aaKnown RBP22.49■■□□□ 1.19
LINC00535-201ENST00000501400 ANP32EQ9BTT0 268 aa22.49■■□□□ 1.19
LINC00535-201ENST00000501400 HSP90AB4PQ58FF6 505 aa22.48■■□□□ 1.19
LINC00535-201ENST00000501400 UNC5CLQ8IV45 518 aa22.48■■□□□ 1.19
LINC00535-201ENST00000501400 SYTL4Q96C24 671 aaPredicted RBP22.48■■□□□ 1.19
LINC00535-201ENST00000501400 TEX13AQ9BXU3 409 aaPredicted RBP22.48■■□□□ 1.19
LINC00535-201ENST00000501400 RBM25P49756 843 aaKnown RBP22.47■■□□□ 1.19
LINC00535-201ENST00000501400 JARID2Q92833 1246 aaPredicted RBP22.47■■□□□ 1.19
LINC00535-201ENST00000501400 UBE3BQ7Z3V4 1068 aa22.47■■□□□ 1.19
LINC00535-201ENST00000501400 ZBTB3Q9H5J0 574 aa22.47■■□□□ 1.19
LINC00535-201ENST00000501400 CCDC9Q9Y3X0 531 aaKnown RBP22.47■■□□□ 1.19
LINC00535-201ENST00000501400 AOX1Q06278 1338 aa22.47■■□□□ 1.19
LINC00535-201ENST00000501400 CICQ96RK0 1608 aaPredicted RBP22.46■■□□□ 1.19
LINC00535-201ENST00000501400 NUTM1Q86Y26 1132 aa22.45■■□□□ 1.18
LINC00535-201ENST00000501400 C8orf37Q96NL8 207 aa22.45■■□□□ 1.18
LINC00535-201ENST00000501400 A0A087WZG4 1122 aa22.45■■□□□ 1.18
LINC00535-201ENST00000501400 RABL6Q3YEC7 729 aaPredicted RBP22.45■■□□□ 1.18
LINC00535-201ENST00000501400 STARD3NLO95772 234 aa22.44■■□□□ 1.18
LINC00535-201ENST00000501400 CYP19A1P11511 503 aaPredicted RBP22.44■■□□□ 1.18
LINC00535-201ENST00000501400 AK9Q5TCS8 1911 aa22.43■■□□□ 1.18
LINC00535-201ENST00000501400 H7C1W4 665 aa22.43■■□□□ 1.18
LINC00535-201ENST00000501400 OS9Q13438 667 aaPredicted RBP22.43■■□□□ 1.18
LINC00535-201ENST00000501400 VPS72Q15906 364 aa22.43■■□□□ 1.18
LINC00535-201ENST00000501400 PI4K2BQ8TCG2 481 aa22.43■■□□□ 1.18
LINC00535-201ENST00000501400 ANKRD36CQ5JPF3 1778 aa22.42■■□□□ 1.18
LINC00535-201ENST00000501400 USP42Q9H9J4 1324 aaKnown RBP22.42■■□□□ 1.18
LINC00535-201ENST00000501400 RREB1Q92766 1687 aa22.42■■□□□ 1.18
LINC00535-201ENST00000501400 FNBP4Q8N3X1 1017 aaPredicted RBP22.42■■□□□ 1.18
LINC00535-201ENST00000501400 CWC25Q9NXE8 425 aaPredicted RBP22.42■■□□□ 1.18
LINC00535-201ENST00000501400 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.42■■□□□ 1.18
LINC00535-201ENST00000501400 RFX5P48382 616 aaPredicted RBP22.41■■□□□ 1.18
LINC00535-201ENST00000501400 ERC1Q8IUD2 1116 aa22.41■■□□□ 1.18
LINC00535-201ENST00000501400 ACSBG1Q96GR2 724 aa22.41■■□□□ 1.18
LINC00535-201ENST00000501400 NGLY1Q96IV0 654 aa22.41■■□□□ 1.18
LINC00535-201ENST00000501400 SPATA31A6Q5VVP1 1343 aa22.41■■□□□ 1.18
LINC00535-201ENST00000501400 SASH1O94885 1247 aa22.41■■□□□ 1.18
LINC00535-201ENST00000501400 FAM98CQ17RN3 349 aaKnown RBP22.41■■□□□ 1.18
LINC00535-201ENST00000501400 KLHDC4Q8TBB5 520 aa22.41■■□□□ 1.18
LINC00535-201ENST00000501400 CERKQ8TCT0 537 aa22.41■■□□□ 1.18
LINC00535-201ENST00000501400 ISCA1Q9BUE6 129 aa22.41■■□□□ 1.18
LINC00535-201ENST00000501400 THSD7AQ9UPZ6 1657 aa22.41■■□□□ 1.18
LINC00535-201ENST00000501400 CCDC191Q8NCU4 936 aa22.4■■□□□ 1.18
LINC00535-201ENST00000501400 KIF2CQ99661 725 aa22.4■■□□□ 1.18
LINC00535-201ENST00000501400 ZBTB1Q9Y2K1 713 aa22.4■■□□□ 1.18
LINC00535-201ENST00000501400 ZNF330Q9Y3S2 320 aaPredicted RBP22.4■■□□□ 1.18
LINC00535-201ENST00000501400 TBC1D2Q9BYX2 928 aa22.39■■□□□ 1.17
LINC00535-201ENST00000501400 DAXXQ9UER7 740 aaPredicted RBP22.39■■□□□ 1.17
LINC00535-201ENST00000501400 FOXO4P98177 505 aa22.38■■□□□ 1.17
LINC00535-201ENST00000501400 COPRSQ9NQ92 184 aa22.38■■□□□ 1.17
LINC00535-201ENST00000501400 MAP3K15Q6ZN16 1313 aa22.38■■□□□ 1.17
LINC00535-201ENST00000501400 PTPN12Q05209 780 aaKnown RBP22.37■■□□□ 1.17
LINC00535-201ENST00000501400 TCIRG1Q13488 830 aa22.37■■□□□ 1.17
LINC00535-201ENST00000501400 BECN1Q14457 450 aa22.37■■□□□ 1.17
LINC00535-201ENST00000501400 CLASRPQ8N2M8 674 aaKnown RBP22.37■■□□□ 1.17
LINC00535-201ENST00000501400 SIL1Q9H173 461 aa22.37■■□□□ 1.17
LINC00535-201ENST00000501400 NUP98P52948 1817 aa22.37■■□□□ 1.17
LINC00535-201ENST00000501400 CASC1Q6TDU7 716 aa22.37■■□□□ 1.17
LINC00535-201ENST00000501400 KIF6Q6ZMV9 814 aa22.37■■□□□ 1.17
LINC00535-201ENST00000501400 G3BP1Q13283 466 aaKnown RBP eCLIP22.36■■□□□ 1.17
LINC00535-201ENST00000501400 TTC41PQ6P2S7 1318 aa22.36■■□□□ 1.17
LINC00535-201ENST00000501400 COL5A3P25940 1745 aaPredicted RBP22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms